prot_L-digitata_M_contig1018.3.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig1018.3.1
Unique Nameprot_L-digitata_M_contig1018.3.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length466
Homology
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: A0A6H5JFY4_9PHAE (zf-C2HC5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY4_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 1.610e-111
Identity = 207/337 (61.42%), Postives = 235/337 (69.73%), Query Frame = 0
Query:  136 PAPQWSGVSCQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGDTKGGGASEGVSGGAAP-SAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTSHNWLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVETKE------AGEGGAQEKSDEAVNAAMEGLSLDFGANARGTSGGIGGGAVGAANTTAVEQQPPAGSGQAADQRPSLENTGLRGRAKEVYDVMRINLDKQSRRQ-PGGRGGK---GSRIAGGGGVRAEKSRVSLWRVQHDVESEDVLRRSQPSADGGSTVGGFVPDGLDKFQPRDELA 461
            P P+WSGV+C CMGKTHD+VTNCT CGKIACV EGGFGCSFC   LP TGREP+S + G        +G +G AAP SAALKEALERKD+LLLFDRTSASRTRVLDDQGDYFTSHNWLSQRERE GEAEEKARRD+AA RRGARR+VK+SIDIMGRRV+ET        A  GG +  +DE  +   +G+SLDFG+                      E+    G+G   +QR SLENTGLRGRAKEVYDVMR NLDK+SRRQ PGG GGK   GSRI G      E SRV+LWRVQHDV+S+D+LR+SQ S             G  KF+P DELA
Sbjct:  228 PVPEWSGVTCLCMGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPRSATSGGV------DGAAGAAAPHSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKARRDDAASRRGARRQVKMSIDIMGRRVIETHPGEDGGLADGGGGEXXADEDASRKTQGVSLDFGSXXXXXXXXXXXXXXXXXXXXXAEEADTPGAGNG-NQRLSLENTGLRGRAKEVYDVMRANLDKKSRRQRPGGAGGKAVAGSRIVG---AVPEASRVNLWRVQHDVDSDDLLRQSQASGXXXXXXX-XXXXGFGKFEPADELA 553          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: D7FU14_ECTSI (Similar to thyroid hormone receptor interactor 4 isoform 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU14_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 3.380e-111
Identity = 199/326 (61.04%), Postives = 234/326 (71.78%), Query Frame = 0
Query:  148 MGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGDTKGGGASEGVSGGAAP-SAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTSHNWLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVETKEAGEG-----GAQEKSDEAVNAAMEGLSLDFGANARGTSGGIGGGAVGAANTTAVEQQPPAGSGQAADQRPSLENTGLRGRAKEVYDVMRINLDKQSRRQ-PGGRGGK---GSRIAGGGGVRAEKSRVSLWRVQHDVESEDVLRRSQPSADGGSTVGGFVPDGLDKFQPRDELACT 463
            MGKTHD+VTNCT CGKIACV EGGFGCSFC   LP TGREP+S + G        +G +G  AP SAALKEALERKD+LLLFDRTSASRTRVLDDQGDYFTSHNWLSQRERE GEAEEK RRD+AA RRGARR+VK+SIDIMGRRV+ET++ GEG     G + ++D+  +   +G+SLDFG+++    G  G  A      +  E+   +G+G   +QR SLENTGLRGRAKEVYDVMR NLDK+SRR+ P G GGK   GSRI G      E SRV+LWRVQHDV+S+D+LR+SQ S             G  KF+P DELAC 
Sbjct:    1 MGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPRSAASGGV------DGAAGATAPQSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKVRRDDAASRRGARRQVKMSIDIMGRRVIETQDPGEGRADGGGGEGEADDDASKKTQGVSLDFGSSSAAGGGAAGSSAXXXXXGSIGEEAGTSGAGNG-NQRLSLENTGLRGRAKEVYDVMRANLDKKSRRRRPRGAGGKAVAGSRIVG---AVPETSRVNLWRVQHDVDSDDLLRQSQASGXXXXXXX-XXXXGFGKFEPADELACA 315          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: A0A0C9R7G9_9HYME (Trip4_1 protein n=2 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9R7G9_9HYME)

HSP 1 Score: 95.5 bits (236), Expect = 1.940e-17
Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 0
Query:  143 VSCQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGDTKGGGASEGVSGGAAPSAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTSHN--WLSQRERESGEAEEKARRDEAAQRR-GARREVKLSIDIMGRRVVETKEAGE 300
            V C C  KTH ++ NC TCG+I C  EG   C FC  ++    ++    +         S+ +          K AL+++DKLL FDR SA RTRV+DD+ DY+ S N  WLS+ ER    AE + R  E  +R+ G+R E K ++DI GR+VVE ++  E
Sbjct:  132 VKCDCEAKTHKLINNCLTCGRIVCEQEGAGPCFFCGELVCTPNQQNVLSTNSKN-----SDNLYNKLMEQKPSKAALKQRDKLLEFDRNSAKRTRVIDDESDYYQSSNSVWLSKEER----AEMERREAEMKERKYGSRLEKKFTVDIFGRQVVEEEDDSE 283          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: A0A0N8D2Q7_9CRUS (Activating signal cointegrator n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8D2Q7_9CRUS)

HSP 1 Score: 92.8 bits (229), Expect = 1.500e-16
Identity = 57/158 (36.08%), Postives = 89/158 (56.33%), Query Frame = 0
Query:  145 CQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSG------GDTKGGGASEGVSGGAAPSAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTS--HNWLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVE 294
            C+C    H ++ NC  CG++ C  EG   C FC   +P   +E  SQ+           G G  +G +  A P  A   A+  K+KLL FDRTS  RTRV+DD+ DYF +  + WL+ ++R++  ++E+  R+    R G+RR +K+++D  GR+V+E
Sbjct:  131 CECQASKHSLIRNCLECGRVICSQEGPGPCIFCTENMPANEKETYSQANKPAPQRSKQSGKGFLDGTA--ALPDKAFTTAMAHKEKLLEFDRTSEHRTRVIDDESDYFNADGNKWLNPKQRDALRSKERELRES---RHGSRRGMKVTLDFAGRQVIE 283          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: E9GBD9_DAPPU (ASCH domain-containing protein n=4 Tax=Daphnia TaxID=6668 RepID=E9GBD9_DAPPU)

HSP 1 Score: 92.4 bits (228), Expect = 1.990e-16
Identity = 59/156 (37.82%), Postives = 84/156 (53.85%), Query Frame = 0
Query:  145 CQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGD----TKGGGASEGVSGGAAPSAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFT--SHNWLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVE 294
            C+C    H +V NC  CG++ C  EG   C FC   +    +E   QS       TK  G          P  A   A+  K+KLL FDRTS  RTRV+DD+ DYF   S+ WL+ ++R++   +EK  RD    R G+RR++K+++D  GR+V+E
Sbjct:  129 CECQASKHSLVRNCLECGRVICAQEGPGPCVFCTENMSACEKEALLQSNNAPAQRTKQSGRRFLDGTAPLPDKAFTTAMAHKEKLLEFDRTSEHRTRVIDDESDYFNADSNKWLNPKQRDALRTKEKELRDS---RHGSRRQIKVTLDFAGRQVIE 281          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: A0A7R9FI96_9NEOP (Hypothetical protein n=1 Tax=Timema tahoe TaxID=61484 RepID=A0A7R9FI96_9NEOP)

HSP 1 Score: 92.0 bits (227), Expect = 3.710e-16
Identity = 57/157 (36.31%), Postives = 91/157 (57.96%), Query Frame = 0
Query:  145 CQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGDTKGGGASEGVSGGAAPSAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTSHN-WLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVETKEAGE 300
            C+C    H ++ NC  CG+I C  EG   C FC  ++     +   QSG   +G    + + GGA      + AL+ +D+LL +DRTS  RTRV+DD+ DYF +++ WLS  ERE    +EK +RD+   R  +R + ++++D  GR+V+E ++ G+
Sbjct:  166 CECQASKHRLINNCLKCGRIVCEQEGSGPCLFCYTLVCSQDEQTMLQSG-SKQGDKLYQKLMGGAKQD--TETALQHRDRLLEYDRTSERRTRVIDDESDYFAANSVWLSSAEREKMREKEKEQRDK---RHASRLDKRVTLDFAGRQVLEEEDGGD 316          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: A0A7R9K444_TIMGE (Hypothetical protein n=1 Tax=Timema genevievae TaxID=629358 RepID=A0A7R9K444_TIMGE)

HSP 1 Score: 92.0 bits (227), Expect = 3.910e-16
Identity = 57/157 (36.31%), Postives = 91/157 (57.96%), Query Frame = 0
Query:  145 CQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGDTKGGGASEGVSGGAAPSAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTSHN-WLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVETKEAGE 300
            C+C    H ++ NC  CG+I C  EG   C FC  ++     +   QSG   +G    + + GGA      + AL+ +D+LL +DRTS  RTRV+DD+ DYF +++ WLS  ERE    +EK +RD+   R  +R + ++++D  GR+V+E ++ G+
Sbjct:  179 CECQASKHRLINNCLKCGRIVCEQEGSGPCLFCYTLVCSQDEQTMLQSG-SKQGDKLYQKLMGGAKQD--TETALQHRDRLLEYDRTSERRTRVIDDESDYFAANSVWLSSAEREKMREKEKEQRDK---RHASRLDKRVTLDFAGRQVLEEEDGGD 329          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: A7RPW2_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RPW2_NEMVE)

HSP 1 Score: 91.3 bits (225), Expect = 5.090e-16
Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 0
Query:  145 CQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAA---------VLPRTGR----------------EPKSQSGGDTKGGGASEGVSGGAAPSAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTS--HNWLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVE 294
            C+C+G+ H +V NCT+CG+I C  EG   C FC A         ++ R  +                E KSQ    T  G   +G          L +A+  K+KLL +D+TS  RT+V+DD+ DYF++  + WLS++E+E    +E+  R   A+R G+RR++K+++D  GRRVVE
Sbjct:  125 CECLGQKHGLVNNCTSCGRIVCDQEGAGPCYFCGALVCSRAEQEIIARESKKSAKLLKQLMSQEFSEEVKSQGRMGTSNGKDLQG----------LDKAIAHKNKLLEYDKTSVCRTKVIDDECDYFSTDGNKWLSKKEKEQLTVKEEELR---AKRHGSRRDMKITLDFAGRRVVE 288          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: UPI00077AD339 (activating signal cointegrator 1-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AD339)

HSP 1 Score: 90.9 bits (224), Expect = 6.940e-16
Identity = 60/164 (36.59%), Postives = 97/164 (59.15%), Query Frame = 0
Query:  145 CQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTG-------REPKSQSGGDTKGGGASEGVSGGAAPSA--ALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTS--HNWLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVETKE 297
            C+C+G+ H ++ NC  CG+I C+ EG   C FC A++  T        +  KSQ   +     + E  S      A   L+EA+  K+KL+ FD++   RT+V+DD+ DYF S  + WLS+RER++   +E+  R++   R G+RR++K+++D  GRRV++ KE
Sbjct:  134 CECLGQKHQLINNCIECGRIVCMQEGSGPCYFCGALVCSTEEKEILAQKSKKSQKLYEKLLTRSIEDASEETLSVADKGLQEAIAHKNKLIEFDKSGVRRTKVIDDECDYFASDSNRWLSKRERDTLRKKEEDLREK---RHGSRRQMKVTLDFAGRRVIDEKE 294          
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Match: UPI001EE5E5BD (LOW QUALITY PROTEIN: activating signal cointegrator 1-like n=3 Tax=Haliotis TaxID=6452 RepID=UPI001EE5E5BD)

HSP 1 Score: 90.1 bits (222), Expect = 1.440e-15
Identity = 69/196 (35.20%), Postives = 105/196 (53.57%), Query Frame = 0
Query:  144 SCQCMGKTHDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGDTKGG--------GAS-------EGVSGGAAPSAALK------EALERKDKLLLFDRTSASRTRVLDDQGDYFTSHN-WLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVETKEAGEGGAQEKSDEAVNAAMEG 317
            +C+C    H +V NCT CG++ C  EG   C F       T  E +  + G  K          GA+       EG  GG  P+AA+K      +AL+ K++LL FDRTSA RT+V+DD+ DYF S + WLS+++RE+ +  E+  R   +QR  +RR+ K+++D  GR+VV+ +        + +DE V    +G
Sbjct:  166 TCECQASKHSLVNNCTCCGRVVCQQEGSGPCVF-XXXXXXTREEQEILNRGSKKSERLRQQLMKGATIVPFLETEGGGGGLLPTAAVKMSEGLEKALKHKERLLDFDRTSARRTKVIDDESDYFASDSKWLSKKDREALKKREEELR---SQRFASRRDRKITLDFAGRQVVDAESDAAKYMYDANDEVVQQVYQG 357          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1018.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFY4_9PHAE1.610e-11161.42zf-C2HC5 domain-containing protein n=1 Tax=Ectocar... [more]
D7FU14_ECTSI3.380e-11161.04Similar to thyroid hormone receptor interactor 4 i... [more]
A0A0C9R7G9_9HYME1.940e-1739.13Trip4_1 protein n=2 Tax=Fopius arisanus TaxID=6483... [more]
A0A0N8D2Q7_9CRUS1.500e-1636.08Activating signal cointegrator n=2 Tax=Daphnia mag... [more]
E9GBD9_DAPPU1.990e-1637.82ASCH domain-containing protein n=4 Tax=Daphnia Tax... [more]
A0A7R9FI96_9NEOP3.710e-1636.31Hypothetical protein n=1 Tax=Timema tahoe TaxID=61... [more]
A0A7R9K444_TIMGE3.910e-1636.31Hypothetical protein n=1 Tax=Timema genevievae Tax... [more]
A7RPW2_NEMVE5.090e-1635.59Predicted protein n=2 Tax=Nematostella vectensis T... [more]
UPI00077AD3396.940e-1636.59activating signal cointegrator 1-like n=2 Tax=Acro... [more]
UPI001EE5E5BD1.440e-1535.20LOW QUALITY PROTEIN: activating signal cointegrato... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009349Zinc finger, C2HC5-typePFAMPF06221zf-C2HC5coord: 144..181
e-value: 4.9E-9
score: 36.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..385
IPR039128Activating signal cointegrator 1-likePANTHERPTHR12963THYROID RECEPTOR INTERACTING PROTEIN RELATEDcoord: 135..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1018contigL-digitata_M_contig1018:6636..8033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1018.3.1mRNA_L-digitata_M_contig1018.3.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig1018 6422..8113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig1018.3.1 ID=prot_L-digitata_M_contig1018.3.1|Name=mRNA_L-digitata_M_contig1018.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=466bp
MYQKPAEEEDFWGGGTKSGRSASAKGTATPAPTPAGKPVPAPIRATTTNT
QNKPKGNAKDGGKPSTATTKPKPPAVPATAYVQPRAAPPVAAPPASNVSK
PTNRSAGQGKASGRAPAGLGGTPKKAAAAAVAVAEPAPQWSGVSCQCMGK
THDIVTNCTTCGKIACVVEGGFGCSFCAAVLPRTGREPKSQSGGDTKGGG
ASEGVSGGAAPSAALKEALERKDKLLLFDRTSASRTRVLDDQGDYFTSHN
WLSQRERESGEAEEKARRDEAAQRRGARREVKLSIDIMGRRVVETKEAGE
GGAQEKSDEAVNAAMEGLSLDFGANARGTSGGIGGGAVGAANTTAVEQQP
PAGSGQAADQRPSLENTGLRGRAKEVYDVMRINLDKQSRRQPGGRGGKGS
RIAGGGGVRAEKSRVSLWRVQHDVESEDVLRRSQPSADGGSTVGGFVPDG
LDKFQPRDELACTSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009349Znf_C2HC5
IPR039128TRIP4-like