prot_L-digitata_M_contig101383.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig101383.1.1
Unique Nameprot_L-digitata_M_contig101383.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length49
Homology
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: A0A6H5L457_9PHAE (zf-Tim10_DDP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L457_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.340e-21
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQNQKAKD 49
            F +C KSFRSKRLDDGE+KCINVCA+K+IKLT RVALRFQDIQ QKAKD
Sbjct:   33 FDECSKSFRSKRLDDGETKCINVCAEKYIKLTSRVALRFQDIQQQKAKD 81          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: A0A024TE29_9STRA (zf-Tim10_DDP domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TE29_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.420e-9
Identity = 23/43 (53.49%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQ 43
            F++C++SFRSK+L+D E  C+N+CA+KF+K T RV +RF + Q
Sbjct:   39 FNECVQSFRSKKLEDKEENCMNLCAEKFLKHTQRVGVRFAEAQ 81          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: A0A024G9K4_9STRA (zf-Tim10_DDP domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9K4_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.330e-9
Identity = 22/41 (53.66%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQD 41
            F++C+ SFRSK+LDD ES C+N CA+KF++ T R ++R Q+
Sbjct:   34 FTECVHSFRSKKLDDKESNCVNTCAEKFLRHTMRSSIRLQE 74          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: A0A7S2CLT1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLT1_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.430e-8
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQ 43
            F+ CIK+FRS  L D ESKC+N CA+KFIKL  R   R+Q+ Q
Sbjct:   59 FNDCIKTFRSSTLSDQESKCVNSCAEKFIKLGRRAGYRYQEHQ 101          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: A0A7S3BME1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BME1_9EUKA)

HSP 1 Score: 54.7 bits (130), Expect = 2.680e-8
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQNQ 45
            FS+C+  FRSK L   E KCIN CA+KFIK +GRV  RF ++  Q
Sbjct:   59 FSECVNGFRSKALTAPEEKCINTCAEKFIKHSGRVGQRFGELTAQ 103          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: A0A388M117_CHABU (zf-Tim10_DDP domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M117_CHABU)

HSP 1 Score: 53.9 bits (128), Expect = 3.450e-8
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDI 42
            F+ C+ SFR K LD  E  C+  C +KF+K TGRV+LRFQ+I
Sbjct:   41 FNNCVDSFRRKTLDKTEETCVKRCVEKFLKHTGRVSLRFQEI 82          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: W4FPA0_9STRA (zf-Tim10_DDP domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPA0_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 4.760e-8
Identity = 23/43 (53.49%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQ 43
            F++C++SFRSK+L+D E  C+N+CA+KF+K T RV +RF + Q
Sbjct:   39 FNECVQSFRSKKLEDKEVNCMNLCAEKFLKHTQRVGVRFAEAQ 81          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: A0A1Y1IU56_KLENI (Mitochondrial import inner membrane translocon protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IU56_KLENI)

HSP 1 Score: 52.8 bits (125), Expect = 9.830e-8
Identity = 22/44 (50.00%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQN 44
            FS C+ +FR K LD  E KCI  CA+KF+K T RV++RF ++ +
Sbjct:   41 FSNCVDTFRRKTLDKDEDKCIRRCAEKFLKHTARVSMRFAELNS 84          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: B7G5E1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5E1_PHATC)

HSP 1 Score: 52.8 bits (125), Expect = 1.030e-7
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQNQKAK 48
            F  C+ SFRSK LD  E  CI  CAD+++K+T RV LRF + Q  + K
Sbjct:   39 FDGCVTSFRSKTLDKSEISCIEHCADRYVKMTQRVGLRFAEHQAMQQK 86          
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Match: G4YG78_PHYSP (zf-Tim10_DDP domain-containing protein n=12 Tax=Peronosporaceae TaxID=4777 RepID=G4YG78_PHYSP)

HSP 1 Score: 52.0 bits (123), Expect = 1.890e-7
Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQD 41
            FS C+ +FRSK+LDD E+ C+N CA+KF++ T R ++R Q+
Sbjct:   34 FSDCVHAFRSKKLDDKETSCVNNCAEKFLRHTMRSSVRLQE 74          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101383.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L457_9PHAE1.340e-2183.67zf-Tim10_DDP domain-containing protein n=2 Tax=Ect... [more]
A0A024TE29_9STRA1.420e-953.49zf-Tim10_DDP domain-containing protein n=4 Tax=Aph... [more]
A0A024G9K4_9STRA8.330e-953.66zf-Tim10_DDP domain-containing protein n=1 Tax=Alb... [more]
A0A7S2CLT1_9STRA1.430e-858.14Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S3BME1_9EUKA2.680e-855.56Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A388M117_CHABU3.450e-854.76zf-Tim10_DDP domain-containing protein n=1 Tax=Cha... [more]
W4FPA0_9STRA4.760e-853.49zf-Tim10_DDP domain-containing protein n=2 Tax=Aph... [more]
A0A1Y1IU56_KLENI9.830e-850.00Mitochondrial import inner membrane translocon pro... [more]
B7G5E1_PHATC1.030e-750.00Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
G4YG78_PHYSP1.890e-751.22zf-Tim10_DDP domain-containing protein n=12 Tax=Pe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810Mitochondrial import inner membrane translocase subunit tim13 like domainscoord: 1..49
e-value: 6.0E-14
score: 53.5
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 1..46
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 1..40
e-value: 5.6E-11
score: 41.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101383contigL-digitata_M_contig101383:255..401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101383.1.1mRNA_L-digitata_M_contig101383.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig101383 255..401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig101383.1.1 ID=prot_L-digitata_M_contig101383.1.1|Name=mRNA_L-digitata_M_contig101383.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=49bp
FSKCIKSFRSKRLDDGESKCINVCADKFIKLTGRVALRFQDIQNQKAKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035427Tim10-like_dom_sf
IPR004217Tim10-like