prot_L-digitata_M_contig101069.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-digitata_M_contig101069.1.1
Unique Name	prot_L-digitata_M_contig101069.1.1
Type	polypeptide
Organism	Laminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length	119

Homology

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BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A059FE04_9PROT (Isovaleryl-CoA dehydrogenase n=35 Tax=root TaxID=1 RepID=A0A059FE04_9PROT)

HSP 1 Score: 234 bits (596), Expect = 3.700e-74
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            MI NTYP+LNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHS LCVNQLRRWGND+QK+RYL
Sbjct:    1 MIANTYPSLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSNLCVNQLRRWGNDNQKTRYL 119

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BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A399R3W2_9PROT (Isovaleryl-CoA dehydrogenase n=3 Tax=Henriciella TaxID=453849 RepID=A0A399R3W2_9PROT)

HSP 1 Score: 218 bits (554), Expect = 7.890e-68
Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            MIPNTYPTLNFDLGETADMIR+TV SFA + +AP AAEIDRTD FPR LLPKMGELGLLGITVEEEWGG+GLGYLEHVVAMEEISRASASVGLSYGAHS LCVNQLRRWG D+QK RYL
Sbjct:    1 MIPNTYPTLNFDLGETADMIRDTVKSFAADHVAPLAAEIDRTDVFPRHLLPKMGELGLLGITVEEEWGGSGLGYLEHVVAMEEISRASASVGLSYGAHSNLCVNQLRRWGTDEQKKRYL 119

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BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A4Q5XVF7_9PROT (Isovaleryl-CoA dehydrogenase n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A4Q5XVF7_9PROT)

HSP 1 Score: 207 bits (528), Expect = 6.260e-64
Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            MIPNT  +L+FDLGETADMIR+TV+SFAQ+EIAPRAAEIDRTD FPRDL P+MGELGLLGITVEEEWGG+GLGYLEH VAMEEISRASASVGLSYGAHS LCVNQ+RRWG D+QK RYL
Sbjct:    1 MIPNTR-SLDFDLGETADMIRDTVSSFAQSEIAPRAAEIDRTDEFPRDLWPRMGELGLLGITVEEEWGGSGLGYLEHAVAMEEISRASASVGLSYGAHSNLCVNQMRRWGTDEQKRRYL 118

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BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A3C2E337_9PROT (Acyl-CoA dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A3C2E337_9PROT)

HSP 1 Score: 205 bits (521), Expect = 7.240e-63
Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            MIPN YP++NFDLGETA+MIR+TV SFA +E+APRAAEIDRTD FP DL  KMG+LGLLGITVEE+WGGTGLGYLEHVVAMEEISR SASVGLSYGAHS LCVNQ+RRW ND+QK R+L
Sbjct:    1 MIPNQYPSMNFDLGETAEMIRDTVRSFASDELAPRAAEIDRTDEFPADLWRKMGDLGLLGITVEEDWGGTGLGYLEHVVAMEEISRGSASVGLSYGAHSNLCVNQVRRWANDEQKHRFL 119

[Close]

BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A2E1LQF9_9PROT (Acyl-CoA dehydrogenase n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A2E1LQF9_9PROT)

HSP 1 Score: 202 bits (515), Expect = 5.620e-62
Identity = 98/114 (85.96%), Postives = 104/114 (91.23%), Query Frame = 0

Query:    6 YPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            YPTLNFDLGETADMIR+TV +FA NEIAP A+EIDRTD FPR LLP+MGE+GLLGITVEEEWGG+GLGYLEH VAMEEISRASASVGLSYGAHS LCVNQLRRWG D QK RYL
Sbjct:    5 YPTLNFDLGETADMIRDTVRAFAVNEIAPLASEIDRTDVFPRHLLPRMGEMGLLGITVEEEWGGSGLGYLEHCVAMEEISRASASVGLSYGAHSNLCVNQLRRWGTDAQKLRYL 118

[Close]

BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A2E5V035_9PROT (Acyl-CoA dehydrogenase n=2 Tax=Maricaulaceae TaxID=2800061 RepID=A0A2E5V035_9PROT)

HSP 1 Score: 199 bits (505), Expect = 1.830e-60
Identity = 98/119 (82.35%), Postives = 107/119 (89.92%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            MI N YPTL+F LG+TADMIR+TV SFA +EIAPRAAEID+TD FP DL  KMG+LGLLGITVEEE GG+GLGYLEHVVAMEEISRASASVGLSYGAHS LCVNQLRRWGND QK++YL
Sbjct:    1 MISNQYPTLDFHLGDTADMIRDTVRSFASDEIAPRAAEIDQTDIFPHDLWRKMGDLGLLGITVEEELGGSGLGYLEHVVAMEEISRASASVGLSYGAHSNLCVNQLRRWGNDAQKTKYL 119

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BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A1G9VVU5_9PROT (Isovaleryl-CoA dehydrogenase n=4 Tax=Maricaulis TaxID=74317 RepID=A0A1G9VVU5_9PROT)

HSP 1 Score: 197 bits (501), Expect = 8.060e-60
Identity = 98/119 (82.35%), Postives = 106/119 (89.08%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            MI N YP+L+FDLGETADMIR+TV SFA +EIAPRAAEIDR+D FP DL  KMG LGLLG+TV EE GGTGLGYLEHVVAMEEISRASASVGLSYGAHS LCVNQLRRWGN +QK+RYL
Sbjct:    5 MISNQYPSLDFDLGETADMIRDTVRSFASDEIAPRAAEIDRSDVFPADLWEKMGALGLLGMTVPEEDGGTGLGYLEHVVAMEEISRASASVGLSYGAHSNLCVNQLRRWGNAEQKARYL 123

[Close]

BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A0A2P2E7Z4_9PROT (Acyl-CoA dehydrogenase n=6 Tax=Proteobacteria TaxID=1224 RepID=A0A2P2E7Z4_9PROT)

HSP 1 Score: 197 bits (500), Expect = 1.060e-59
Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            M+ N+YPTL+FDLGETA+ IRETV  F+  EIAPRAA+IDRTDTFPRDL PK+GELGLLGITVEE  GG+GLGYLEHV+AMEEISRASASVGLSYGAHS LCVNQLRRWG  +QK+RYL
Sbjct:    1 MLRNSYPTLDFDLGETAEAIRETVERFSAAEIAPRAADIDRTDTFPRDLWPKLGELGLLGITVEEADGGSGLGYLEHVIAMEEISRASASVGLSYGAHSNLCVNQLRRWGTAEQKARYL 119

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BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: A7HWV5_PARL1 (Acyl-CoA dehydrogenase domain protein n=12 Tax=Alphaproteobacteria TaxID=28211 RepID=A7HWV5_PARL1)

HSP 1 Score: 196 bits (499), Expect = 1.450e-59
Identity = 94/119 (78.99%), Postives = 107/119 (89.92%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            M+ N YP+L+FDLGETADMIR+TV +F  ++I+PRAAEIDRT+ FPRDL P++GELGLLGITVEEE+GGTGLGYLEHVVAMEEISR SASVGLSYGAHS LCVNQLRRWG D QK +YL
Sbjct:    1 MLANDYPSLDFDLGETADMIRDTVRAFTADKISPRAAEIDRTNEFPRDLWPQLGELGLLGITVEEEYGGTGLGYLEHVVAMEEISRGSASVGLSYGAHSNLCVNQLRRWGTDAQKRKYL 119

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BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Match: Q0ANV6_MARMM (Isovaleryl-CoA dehydrogenase n=3 Tax=Maricaulis TaxID=74317 RepID=Q0ANV6_MARMM)

HSP 1 Score: 196 bits (499), Expect = 1.450e-59
Identity = 94/119 (78.99%), Postives = 108/119 (90.76%), Query Frame = 0

Query:    1 MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLLPKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHSTLCVNQLRRWGNDDQKSRYL 119
            MIPN YP+L+F+LG+TA+MIR+TV SFA +EIAPRAAEID+TD FP DL  KMGELGLLGITV E+ GGTGLGYLEHV+AMEEISRASASVGLSYGAHS LCVNQ+RRWGN +QK++YL
Sbjct:    1 MIPNQYPSLDFNLGDTAEMIRDTVRSFASDEIAPRAAEIDKTDVFPADLWQKMGELGLLGITVSEDDGGTGLGYLEHVIAMEEISRASASVGLSYGAHSNLCVNQMRRWGNAEQKTKYL 119

The following BLAST results are available for this feature:

BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot

BLAST of mRNA_L-digitata_M_contig101069.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A059FE04_9PROT	3.700e-74	95.80	Isovaleryl-CoA dehydrogenase n=35 Tax=root TaxID=1...	[more]
A0A399R3W2_9PROT	7.890e-68	88.24	Isovaleryl-CoA dehydrogenase n=3 Tax=Henriciella T...	[more]
A0A4Q5XVF7_9PROT	6.260e-64	85.71	Isovaleryl-CoA dehydrogenase n=5 Tax=Proteobacteri...	[more]
A0A3C2E337_9PROT	7.240e-63	81.51	Acyl-CoA dehydrogenase n=3 Tax=Alphaproteobacteria...	[more]
A0A2E1LQF9_9PROT	5.620e-62	85.96	Acyl-CoA dehydrogenase n=2 Tax=Hyphomonadaceae Tax...	[more]
A0A2E5V035_9PROT	1.830e-60	82.35	Acyl-CoA dehydrogenase n=2 Tax=Maricaulaceae TaxID...	[more]
A0A1G9VVU5_9PROT	8.060e-60	82.35	Isovaleryl-CoA dehydrogenase n=4 Tax=Maricaulis Ta...	[more]
A0A2P2E7Z4_9PROT	1.060e-59	80.67	Acyl-CoA dehydrogenase n=6 Tax=Proteobacteria TaxI...	[more]
A7HWV5_PARL1	1.450e-59	78.99	Acyl-CoA dehydrogenase domain protein n=12 Tax=Alp...	[more]
Q0ANV6_MARMM	1.450e-59	78.99	Isovaleryl-CoA dehydrogenase n=3 Tax=Maricaulis Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal	PFAM	PF02771	Acyl-CoA_dh_N	coord: 15..119 e-value: 3.1E-36 score: 124.5
IPR037069	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	GENE3D	1.10.540.10		coord: 1..119 e-value: 2.7E-38 score: 132.9
None	No IPR available	PANTHER	PTHR43884:SF12	ISOVALERYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED	coord: 11..119
None	No IPR available	PANTHER	PTHR43884	ACYL-COA DEHYDROGENASE	coord: 11..119
IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	SUPERFAMILY	56645	Acyl-CoA dehydrogenase NM domain-like	coord: 9..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-digitata_M_contig101069	contig	L-digitata_M_contig101069:3..359 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-digitata_M_contig101069.1.1	mRNA_L-digitata_M_contig101069.1.1	Laminaria digitata LdigPH10_18mv male	mRNA	L-digitata_M_contig101069 3..359 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-digitata_M_contig101069.1.1 ID=prot_L-digitata_M_contig101069.1.1|Name=mRNA_L-digitata_M_contig101069.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=119bp
MIPNTYPTLNFDLGETADMIRETVASFAQNEIAPRAAEIDRTDTFPRDLL
PKMGELGLLGITVEEEWGGTGLGYLEHVVAMEEISRASASVGLSYGAHST
LCVNQLRRWGNDDQKSRYL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013786	AcylCoA_DH/ox_N
IPR037069	AcylCoA_DH/ox_N_sf
IPR009100	AcylCoA_DH/oxidase_NM_dom