prot_L-digitata_M_contig1009.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig1009.1.1
Unique Nameprot_L-digitata_M_contig1009.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length165
Homology
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: D8LQ55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ55_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 1.840e-113
Identity = 159/164 (96.95%), Postives = 162/164 (98.78%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQMMMNKWTTMKEQMAKPER RRPFLSSECDNLQDAELWRRDIIRET+KSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRI+ELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAK LPGVRELFHKSDVENPRRTRKDMYQ+ITPDYYGYR
Sbjct:    1 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETSKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRILELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKGLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYR 164          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: W7TA77_9STRA (Pre-mrna-splicing factor isy1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA77_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.300e-77
Identity = 115/164 (70.12%), Postives = 133/164 (81.10%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ M+NKW TMK+ +A  +++RRPFLSS+C  L +AE WRR II+E TK V  +QNAG GEH++RDLNDQINKLLRE+ HW KRI ELGGPDY    P++YDADGRELPGGGGY YFGAAKDLPGV+ELF KS  +  RRTR DMY+ I PDYYGYR
Sbjct:    1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYR 164          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: A0A7S2S7Y0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7Y0_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.000e-73
Identity = 112/167 (67.07%), Postives = 133/167 (79.64%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAK---PERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKA  ++NKW TMK + AK   P+R  RP+L++ECD+L+ AE WR D+I+E +K +  IQNAG GEH+IRDLNDQINKLLRE+ HW KRI ELGGPDY A  P+S+DADGRELPGGGGY YFGAAK+LPGVRELF     + PRRTR  +Y+ ITPDYYGYR
Sbjct:    1 MARNEEKAMSLLNKWVTMKSEFAKGGGPQR--RPYLATECDDLRQAERWRLDVIKEVSKGIGEIQNAGLGEHRIRDLNDQINKLLREKFHWQKRIRELGGPDYNAIEPRSFDADGRELPGGGGYKYFGAAKELPGVRELFQAEAPQRPRRTRAQIYKTITPDYYGYR 165          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: K3X334_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X334_GLOUD)

HSP 1 Score: 228 bits (580), Expect = 2.660e-73
Identity = 104/164 (63.41%), Postives = 135/164 (82.32%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ ++N+WT+MK+  +   ++RRP+L+S+CDN++DAE WRR IIRE +K V  IQNAG+GEH IRDLND+INK +RE+ HW+KRIVELGGPDY+ + P++YDADG  + GGGGY YFGAAK+LPGVRELF K +    +RTR+DM++ I PDYYG+R
Sbjct:    1 MARNEEKAQSLLNRWTSMKQDFSDTFKNRRPYLASQCDNIKDAERWRRQIIREISKKVADIQNAGSGEHVIRDLNDEINKRMREKRHWEKRIVELGGPDYSRSQPQAYDADGSSVQGGGGYKYFGAAKNLPGVRELFQKEERAPKKRTRQDMFKNIEPDYYGFR 164          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: H3GPB1_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GPB1_PHYRM)

HSP 1 Score: 224 bits (570), Expect = 8.250e-72
Identity = 102/164 (62.20%), Postives = 135/164 (82.32%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ ++N+WT+MK+  A   ++RRP+L+S+CDNL+DAE WRR I+RE +K V  IQNAG+ EH IRDLND+INK +RE+ HW++RIV+LGG +YA + P++YDADG E+ G GGY YFGAAK+LPGVRELF K + E  +R+R+DMY++I PDYYG+R
Sbjct:    1 MARNEEKAQSLLNRWTSMKQDFADTFKNRRPYLASQCDNLKDAERWRRQIVREISKKVADIQNAGSSEHVIRDLNDEINKRIREKRHWERRIVQLGGTNYARSQPQAYDADGSEVRGAGGYKYFGAAKNLPGVRELFQKEEPEARKRSRQDMYKHIEPDYYGFR 164          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: D0NZZ7_PHYIT (Pre-mRNA-splicing factor ISY1 n=19 Tax=Phytophthora TaxID=4783 RepID=D0NZZ7_PHYIT)

HSP 1 Score: 223 bits (567), Expect = 2.440e-71
Identity = 103/164 (62.80%), Postives = 132/164 (80.49%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ ++N+WT+MK+  A   ++RRP+L+S+CD L+DAE WRR IIRE +K V  IQNAG+ EH IRDLND+INK +RE+ HW++RI +LGGPDY+ + P+SYDADG  +   GGY YFGAAK+LPGVRELF K DVE  +RTR+ MY++I PDYYG+R
Sbjct:    1 MARNEEKAQSLLNRWTSMKQDFADTFKNRRPYLASQCDTLKDAERWRRQIIREISKKVADIQNAGSSEHVIRDLNDEINKRIREKRHWERRIAQLGGPDYSKSQPQSYDADGTPVSSVGGYKYFGAAKNLPGVRELFQKEDVEPRKRTRQHMYKHIKPDYYGFR 164          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: A0A8K1CPD6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPD6_PYTOL)

HSP 1 Score: 222 bits (565), Expect = 4.910e-71
Identity = 102/164 (62.20%), Postives = 130/164 (79.27%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ ++N+WT+MK+  +   ++RRP+L+SECDNL+DAE WRR II+E +K V  IQNAG GEH IRDLND+INK +RE+ HW+KRI+EL G DY  + P +YDADG  + GGGGY YFGAAK+LPGVRELF K  +  P+R R++MY++I PDYYG R
Sbjct:    1 MARNEEKAQSLLNRWTSMKQDFSDTFKNRRPYLASECDNLKDAERWRRQIIKEISKKVADIQNAGLGEHVIRDLNDEINKRIREKYHWEKRIIELNGSDYTRSQPSAYDADGTVVQGGGGYKYFGAAKNLPGVRELFEKEALPEPKRVREEMYKHIEPDYYGLR 164          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: A0A7S0XKX4_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0XKX4_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.730e-70
Identity = 111/165 (67.27%), Postives = 129/165 (78.18%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQM-AKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ+M+N+W TMK++  A    +RRPFL+SEC +L +AE WR  IIRE T+ V  IQN+G GEHKIRDLNDQINKLLRE+ HW KRI ELGGPDY A  P S DADGR LPGGGGY YFGAAKDLPGVR+LF  +     RRTR +MY+ +TPDYYG+R
Sbjct:   12 MARNEEKAQLMLNRWVTMKKEFTAGSFAERRPFLASECGSLGEAEKWRLQIIRELTRKVAHIQNSGLGEHKIRDLNDQINKLLREKGHWQKRIRELGGPDYNAMEPASVDADGRALPGGGGYKYFGAAKDLPGVRDLFKPAGPAKRRRTRAEMYKRVTPDYYGFR 176          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: A0A8J2WI20_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WI20_9STRA)

HSP 1 Score: 223 bits (567), Expect = 7.630e-69
Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQMAKPER-DRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ+M+NKW TMKEQ    +  +RRPFL+++C +L D E WR  I+RE TK V  IQNAG GEHKIRDLND INKLLRE+ HW +RI +LGGPDY A  PK+ DA+GR LPGGGGY YFGAA+DLPGV+ELF     +  RRTR DM + +TPDYYG+R
Sbjct:    1 MARNEEKAQLMLNKWVTMKEQFNSGQAAERRPFLATDCSSLADCEKWRMQIVREVTKKVAAIQNAGLGEHKIRDLNDNINKLLREKGHWQRRIRDLGGPDYNALEPKALDAEGRPLPGGGGYRYFGAARDLPGVKELFEAPPPQKKRRTRGDMMRNVTPDYYGFR 165          
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Match: F0XZD9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZD9_AURAN)

HSP 1 Score: 213 bits (541), Expect = 9.360e-68
Identity = 104/165 (63.03%), Postives = 125/165 (75.76%), Query Frame = 0
Query:    1 MARNEEKAQMMMNKWTTMKEQM-AKPERDRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQYITPDYYGYR 164
            MARNEEKAQ M+NKW TMK++  A    +RRPFL+++C +L D E WR  I+RE T+ V  IQN G GEHKIRDLND INKLLRE+ HW  RI +LGGPDY A  PK+ DA+GR LPGGGGY YFGAA+DLPGV+ELF        RRTR DM++++TPDYYG+R
Sbjct:    1 MARNEEKAQQMLNKWVTMKQEFNAGNIAERRPFLATDCKSLADCEKWRLQIMREITRKVAEIQNQGLGEHKIRDLNDTINKLLREKGHWQFRIRDLGGPDYNALEPKALDAEGRPLPGGGGYKYFGAARDLPGVKELFEAPPPVKKRRTRGDMFKHVTPDYYGFR 165          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1009.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ55_ECTSI1.840e-11396.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TA77_9STRA1.300e-7770.12Pre-mrna-splicing factor isy1 n=1 Tax=Nannochlorop... [more]
A0A7S2S7Y0_9STRA1.000e-7367.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K3X334_GLOUD2.660e-7363.41Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GPB1_PHYRM8.250e-7262.20Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
D0NZZ7_PHYIT2.440e-7162.80Pre-mRNA-splicing factor ISY1 n=19 Tax=Phytophthor... [more]
A0A8K1CPD6_PYTOL4.910e-7162.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0XKX4_9STRA2.730e-7067.27Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
A0A8J2WI20_9STRA7.630e-6964.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0XZD9_AURAN9.360e-6863.03Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..91
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660Helix hairpin bincoord: 39..96
e-value: 7.8E-25
score: 88.5
IPR009360Pre-mRNA-splicing factor Isy1PFAMPF06246Isy1coord: 1..164
e-value: 8.3E-70
score: 235.3
IPR009360Pre-mRNA-splicing factor Isy1PANTHERPTHR13021PRE-MRNA-SPLICING FACTOR ISY1coord: 1..164
IPR037200Pre-mRNA-splicing factor Isy1 superfamilySUPERFAMILY140102ISY1 domain-likecoord: 27..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1009contigL-digitata_M_contig1009:176..670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1009.1.1mRNA_L-digitata_M_contig1009.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig1009 176..955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig1009.1.1 ID=prot_L-digitata_M_contig1009.1.1|Name=mRNA_L-digitata_M_contig1009.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=165bp
MARNEEKAQMMMNKWTTMKEQMAKPERDRRPFLSSECDNLQDAELWRRDI
IRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDY
AANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRK
DMYQYITPDYYGYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029012Helix_hairpin_bin_sf
IPR009360Isy1
IPR037200Isy1_sf