prot_L-digitata_M_contig10089.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10089.1.1
Unique Nameprot_L-digitata_M_contig10089.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length215
Homology
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 3.840e-110
Identity = 165/214 (77.10%), Postives = 182/214 (85.05%), Query Frame = 0
Query:    1 MKSSFCAAAVGVIAAGLASASASEYTPVTAQQQITLFNEEDFAFALGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMAPAMAQRQCLQRCGL 214
            MK+SFCAAA  VIAAGL SA       VT QQQITL+N EDF F+LGGPEPD LVD FQLR   +NQLPAL GQGISM LVNL PCAINLPH+HPRATEM+Y I G QLRVAFVEENGGEGAVVNDL QGDVAFFPQGLIHYQQNLDCEPATFLAALN+EDPG +TITTRFFELP EAIQAS+NF++P L+ L+E+LP APA A++QCLQRC +
Sbjct:    1 MKTSFCAAAGFVIAAGLMSA-VQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRCRM 213          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 5.780e-108
Identity = 158/214 (73.83%), Postives = 177/214 (82.71%), Query Frame = 0
Query:    1 MKSSFCAAAVGVIAAGLASASASEYTPVTAQQQITLFNEEDFAFALGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMAPAMAQRQCLQRCGL 214
            MK+SFC+AA  V+AAG  S++A     VTAQQQIT+FN EDF F LGGPEPD  VD FQ+R   L Q+PAL GQGI+MALVNL  C INLPH+HPRATEM Y I G  LRVAFVEENGGEGAVVNDL QGDV FFPQGLIHY+QNL CEP TFLAALN++DPG VTITTRFFELPSEAIQASLNF+DP L+ L+E+LP APA A+RQCL+RCGL
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC)

HSP 1 Score: 159 bits (401), Expect = 4.200e-44
Identity = 83/175 (47.43%), Postives = 109/175 (62.29%), Query Frame = 0
Query:   42 FAFALGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMAPAMA--QRQCLQRCGL 214
            F F     E D       + G +++Q PALSG G+S  LV+L PC+IN PHVHPRATE++Y I G ++ V F EENGG   V ND+ +GD AFFP  LIH+Q N  CEPA F+A LNS+D GV TI   FF LP + +  +L  D+  +  L E LP  PA+   + +C ++CGL
Sbjct:  147 FDFNTARAEADTNGQGGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKG-RVSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGVDEYEVAVLREELPAGPALGLQREECRRKCGL 319          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: A0A0G4EG82_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG82_VITBC)

HSP 1 Score: 149 bits (377), Expect = 2.440e-41
Identity = 82/193 (42.49%), Postives = 111/193 (57.51%), Query Frame = 0
Query:   24 EYTPVTAQQQITLFNEEDFAFALGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMAPAMAQR--QCLQRCGL 214
            E  P++ +     F   DF F     +     +   +RG    Q PALSG G S  + ++ PC+IN PH+HPRATEMLY   G +L V F EENGG   V ND+ +G+ AFFP  LIH+Q N  CEPA F+  LNS+D GV TI    F LP++ +  +LN D+  +  L + LP  PA+  +  QC ++CGL
Sbjct:   56 EDVPLSRRAFREQFGNSDFTFDFNEAQVLTNGEGGGIRGATPVQWPALSGHGFSQTVTDIAPCSINTPHLHPRATEMLYITKG-RLIVGFAEENGGR-IVTNDIKEGNSAFFPHTLIHWQFNPTCEPAQFVGTLNSDDGGVHTIAQALFGLPNDVLATALNVDEYDVTLLHDELPNVPALGLKRDQCRRKCGL 246          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG)

HSP 1 Score: 149 bits (375), Expect = 3.400e-41
Identity = 82/192 (42.71%), Postives = 117/192 (60.94%), Query Frame = 0
Query:   26 TPVTAQQQITLFNEEDFAFA-LGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFE-LPSEAIQASLN-FDDPTLKALLEALPMAPAMAQRQCLQRCGL 214
            T +T  Q+++L + +DF F  L      ++ D  +         PAL G  I+M +  +GPC+INLPH+HPRATE+ + IA  +    F EENG    +VN L++G+V  FP G IH++QNL+CEPA F+AA NSEDPGV TI + F   LP++ + ASL       +K L + LP  PA+  ++C +RCGL
Sbjct:   44 TAITETQRLSLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINF-IAQGKFEAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: A0A0L0FR85_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR85_9EUKA)

HSP 1 Score: 149 bits (376), Expect = 1.040e-40
Identity = 77/181 (42.54%), Postives = 110/181 (60.77%), Query Frame = 0
Query:   37 FNEEDFAFALGGPEP---DNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMAPAMAQRQCLQRCGL 214
            F+ EDF F          D+L     ++ VNL + P +   G+S +  ++GPC INLPHVHPRATE LY I G Q+ + FV     +  ++NDL +  V FFP+G +HYQQN++CE A F++ L++EDPGV+ +++    LP EA+ A+ N D   +  L   LP  PA A+ +CL RCGL
Sbjct:  105 FDNEDFVFDFTDSNKVTVDSLGLGGNIQPVNLEEFPIMQLAGMSYSRFSIGPCGINLPHVHPRATESLYMIEG-QVTLGFVSTE--DRLIMNDLEKDQVTFFPKGHLHYQQNMNCENAEFISILDNEDPGVLVVSSALLSLPDEALTATFNEDQALIAQLRLGLPEGPARARSECLARCGL 282          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: D7FIJ3_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ3_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 6.080e-40
Identity = 73/95 (76.84%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    5 FCAAAVGVIAAGLASASASEYTPVTAQQQITLFNEEDFAFALGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATE 99
            FCAAA  VIAAGL S++      VTAQQQITLFN EDF F+LGGPEPD LVD FQ+R VN+NQLPAL GQGISMALVNL PCAINLPH+HPRATE
Sbjct:    4 FCAAAGFVIAAGLMSSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATE 98          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: D7FI68_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI68_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 4.190e-39
Identity = 74/104 (71.15%), Postives = 82/104 (78.85%), Query Frame = 0
Query:    5 FCAAAVGVIAAGLASASASEYTPVTAQQQITLFNEEDFAFALGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQ 108
            FCAAA  VIAAGL  ++      VTAQQQITLFN EDF F+LGGPEPD LVD FQ+R VN+NQLPAL GQGISMALVNL PCAINLPH+HPRATE+    A N+
Sbjct:    4 FCAAAGFVIAAGLMPSTVQASGVVTAQQQITLFNPEDFVFSLGGPEPDALVDGFQIRFVNVNQLPALDGQGISMALVNLDPCAINLPHIHPRATEVNEPAAFNR 107          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: A0A0L0GAB9_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAB9_9EUKA)

HSP 1 Score: 142 bits (358), Expect = 5.860e-39
Identity = 78/191 (40.84%), Postives = 106/191 (55.50%), Query Frame = 0
Query:   28 VTAQQQITLFNEEDFAFALGGPEPDNLVDNFQLRG----VNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMAPAMAQRQCLQRCGL 214
            V+A + +  F+ EDF F     E    VD+    G     N+N  P +    ++     + PC INLPHVHPR TE  Y I G +L V FV E+G    V+ND+      FFPQGL+HYQQN+ CEPA F++ L+S DPG++ I      LP EAI A+ + D+  +  +   LP  PA  + +CL RCGL
Sbjct:   13 VSALRYMDNFDAEDFVFDFSDFETGVRVDSDGNGGSSQPANINTFPVVQVANMAQTRFRIAPCGINLPHVHPRGTESAYMIEG-ELTVGFVMESGR--TVINDIKADQSTFFPQGLLHYQQNMGCEPAGFISILDSSDPGLLVIAAAVAGLPEEAIAAAFDEDEAFVAQMRMGLPKVPARGRAECLVRCGL 200          
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Match: A0A0L0FUE8_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUE8_9EUKA)

HSP 1 Score: 142 bits (359), Expect = 4.110e-38
Identity = 78/180 (43.33%), Postives = 102/180 (56.67%), Query Frame = 0
Query:   37 FNEEDFA--FALGGPEPDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEMLYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEPATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMAPAMAQRQCLQRCGL 214
            F+ EDF   FA    E   L    Q    N N +P +    ++     + PC INLPHVHPR TE +Y I G  L V FV E G    ++ND+      FFPQGL+HYQQN+ CEPA F++ LNS DPG++ I     ELPSEA++A+ + D   +  L   LP  PA  + +CL+RCGL
Sbjct:  119 FDAEDFVIDFATQPLESTGLGGTSQ--PANRNNVPVIQASNMAQTRFRIAPCGINLPHVHPRGTESVYIIEG-ALTVGFVTEGGR--LILNDVKTDQSTFFPQGLLHYQQNMACEPAGFISILNSSDPGLLVIPAALAELPSEALEATFDEDAAFVNQLRIGLPAGPARGRAECLRRCGL 293          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10089.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV79_9PHAE3.840e-11077.10Cupin type-1 domain-containing protein n=6 Tax=Ect... [more]
D8LDW6_ECTSI5.780e-10873.83Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A0G4EJ88_VITBC4.200e-4447.43Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A0G4EG82_VITBC2.440e-4142.49Cupin type-1 domain-containing protein n=2 Tax=Vit... [more]
A0A433DF28_9FUNG3.400e-4142.71RmlC-like cupin n=2 Tax=Jimgerdemannia flammicoron... [more]
A0A0L0FR85_9EUKA1.040e-4042.54Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
D7FIJ3_ECTSI6.080e-4076.84Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
D7FI68_ECTSI4.190e-3971.15Cupin-like protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A0L0GAB9_9EUKA5.860e-3940.84Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]
A0A0L0FUE8_9EUKA4.110e-3843.33Cupin type-1 domain-containing protein n=1 Tax=Sph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 158..173
score: 34.59
coord: 125..145
score: 48.39
coord: 92..112
score: 38.87
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 44..191
e-value: 2.8E-31
score: 119.9
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 48..188
e-value: 5.0E-24
score: 84.6
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 14..197
e-value: 3.0E-45
score: 156.1
NoneNo IPR availablePIRSRPIRSR617774-2PIRSR617774-2coord: 74..193
e-value: 1.1E-14
score: 51.9
NoneNo IPR availablePANTHERPTHR31238GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3coord: 33..186
NoneNo IPR availableCDDcd02241cupin_OxOxcoord: 35..193
e-value: 9.45984E-61
score: 186.647
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 59..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10089contigL-digitata_M_contig10089:1007..5039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10089.1.1mRNA_L-digitata_M_contig10089.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10089 1007..5039 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10089.1.1 ID=prot_L-digitata_M_contig10089.1.1|Name=mRNA_L-digitata_M_contig10089.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=215bp
MKSSFCAAAVGVIAAGLASASASEYTPVTAQQQITLFNEEDFAFALGGPE
PDNLVDNFQLRGVNLNQLPALSGQGISMALVNLGPCAINLPHVHPRATEM
LYTIAGNQLRVAFVEENGGEGAVVNDLYQGDVAFFPQGLIHYQQNLDCEP
ATFLAALNSEDPGVVTITTRFFELPSEAIQASLNFDDPTLKALLEALPMA
PAMAQRQCLQRCGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf