prot_L-digitata_M_contig1008.6.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig1008.6.1
Unique Nameprot_L-digitata_M_contig1008.6.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length111
Homology
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BLAST of mRNA_L-digitata_M_contig1008.6.1 vs. uniprot
Match: D7G903_ECTSI (Cilia- and flagella-associated protein 43 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G903_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 4.520e-25
Identity = 59/64 (92.19%), Postives = 60/64 (93.75%), Query Frame = 0 
Query:    1 MERNFKKEIQEAASNPIDMAEMMAQLVQLYKLRDHGAMSTGGSSGYRGSATGMTNRTSNRKSQS 64
            MERNFKKEIQEAASNPIDMAEMMAQLVQLYKLRDH  MSTGGSSGYRGSATGM+N TS RKSQS
Sbjct: 1279 MERNFKKEIQEAASNPIDMAEMMAQLVQLYKLRDHSTMSTGGSSGYRGSATGMSNATSYRKSQS 1342
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BLAST of mRNA_L-digitata_M_contig1008.6.1 vs. uniprot
Match: A0A835YXJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.280e-15
Identity = 63/117 (53.85%), Postives = 79/117 (67.52%), Query Frame = 0 
Query:    1 MERNFKKEIQEAASNPIDMAEMMAQLVQLYKLRDHGAMSTGG--SSGY-RGSATGMTNRTSN------RKSQSSRRTQNMRESAMGRSKRKRGSRVSSGGGSMRASHG-LGPLQEVM 107
            +ERNFKK+IQEAASNPIDMA+ MAQLV+LYKLR+  A S  G  SSGY RGSA GM++          ++   S+++ N+RES+M        SR+SSGGGS  A  G LGP+QE M
Sbjct: 1518 LERNFKKDIQEAASNPIDMADTMAQLVKLYKLRESDARSQFGYGSSGYGRGSAFGMSSARMXXXXXXXQRHNMSQQSTNLRESSMA------VSRMSSGGGSRAAGAGSLGPMQEAM 1628
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BLAST of mRNA_L-digitata_M_contig1008.6.1 vs. uniprot
Match: D7G902_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G902_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 7.160e-10
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 
Query:   71 MRESAMGRSKRKRGSRVSSGGGSMRASHGLGPLQEVM 107
            MRESAMGRSKRKR SRVSSGGGSMRASHGLGPLQE M
Sbjct:    1 MRESAMGRSKRKRNSRVSSGGGSMRASHGLGPLQEAM 37
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BLAST of mRNA_L-digitata_M_contig1008.6.1 vs. uniprot
Match: A0A6H5KRL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL2_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 5.360e-7
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:    1 MERNFKKEIQEAASNPIDMAEMMAQLVQL 29
            MERNFKKEIQEAASNPIDMAEMMAQLVQ+
Sbjct:  384 MERNFKKEIQEAASNPIDMAEMMAQLVQV 412
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1008.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G903_ECTSI4.520e-2592.19Cilia- and flagella-associated protein 43 n=1 Tax=... [more]
A0A835YXJ9_9STRA3.280e-1553.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G902_ECTSI7.160e-1094.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRL2_9PHAE5.360e-796.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1008contigL-digitata_M_contig1008:15730..18234 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1008.6.1mRNA_L-digitata_M_contig1008.6.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig1008 14100..19406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig1008.6.1 ID=prot_L-digitata_M_contig1008.6.1|Name=mRNA_L-digitata_M_contig1008.6.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=111bp
MERNFKKEIQEAASNPIDMAEMMAQLVQLYKLRDHGAMSTGGSSGYRGSA
TGMTNRTSNRKSQSSRRTQNMRESAMGRSKRKRGSRVSSGGGSMRASHGL
GPLQEVMARQ*
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