prot_L-digitata_M_contig10040.2.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig10040.2.1
Unique Nameprot_L-digitata_M_contig10040.2.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length574
Homology
BLAST of mRNA_L-digitata_M_contig10040.2.1 vs. uniprot
Match: D7FPZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ0_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.310e-77
Identity = 259/605 (42.81%), Postives = 337/605 (55.70%), Query Frame = 0
Query:    1 MHAPVGLALLESWIDTSTAHAE-----SFAAHADRERAEEVLLLFTGENRETADNALA-----LWKTIEEWRTEPSASDEYQQLGRSILNNKFASSSSAMGTTTNIKGTDHLP-------GGEVGGALAGSEPGFSIGNSNSSSSSLGTTNQKNASMLRVHPTEFPPSEEDTIINPLGFEEASWRALVSLSGV-VGRAFLTSVAYAGYLDEMGRPRREAIKAAATGIAKRRRAESLAEARELREAAFVRAREAMVDDLAENALTLFVRGTGTETETAATSTGFLGDLVDGQAALLSVVIIAERSAFVKIISAVWNEAINEAAAAESTASLEQRKVSPAIADTLSEAASAVARSRVMDKLIDDRVLDLTGPQGELWADARAMAAVADGVGYRVRCDVIEDMLEASVFELQESGEVERLMSDAE--RRRGE-----------EAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSVDAQGDIASTAFTADVAVTDDTCLSVAGXXXXXXXXALGFLHGKEDAAVVVQSAWRRKAVYRAVRTLVAQNFVKLYDPAYGTFYWYNQATGESTWEKPAIIDAYFK 574
            M  PVGLA+ E +++ +   AE     SF   A  +    V     G    ++  A A     +WK I+ WR   S    +QQLG +I+ ++                  HLP       GGE    L G E G + G   +     G  N  +       P     +   T++ P   EEAS+RA+  LS   VG AFL S AY  YLD + +P R A++AA+  IA    AE  AEA  LR+AA  R +EA V+ LA  A  L ++G        A     LG L+D QA+LL+VVIIAERS F K+ISAVWNE ++EAA      +LE R++ P +A  LSEAA + ARSR+MD+LID   +DLTGP+G+LWADAR M AVADG+GY+VR  V+ ++++ +V EL  SGE E LMS+A   RRR E           EA+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + + +G +     T      + +     G        ++G    + +AAV++QSA RRKA YR ++ +VAQNF+++YDP  G FYWYNQAT ESTW+KP IID YFK
Sbjct:  329 MRDPVGLAVFEEFVEAAAVAAEPDGKGSFTRQASSDEQPPVKQSDQGSTPASSVGAAARDTLDVWKAIQAWRLISSDQKRFQQLGEAIILSRTK--------------YPHLPDDVRVALGGEQLRRLFG-ELGATHGGKPNKKLLPGRGNHTSTLQRPSPPRSGDDARVTTVVEPSALEEASFRAVAFLSECQVGLAFLGSSAYRTYLDGVHKPMRNAVEAASAEIAAAEEAEWAAEAHSLRKAALDREQEAQVECLANQATRLVLQG--------AVGASLLGGLIDDQASLLAVVIIAERSTFAKVISAVWNETVDEAA---HLIALEDREIDPGVASALSEAACSFARSRIMDELIDQCGVDLTGPEGDLWADARPMEAVADGLGYQVRSKVMSELVDEAVSELAASGEAEELMSEAALARRRREDELREGGEAKDEADGIAGAGDVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVLVGADEVRGGLEEAGGTDGEGRRESSVDRTGGSSGRS---SVGSTLAETEAAVLMQSALRRKAAYREMKKVVAQNFIRMYDPGEGAFYWYNQATMESTWDKPVIIDLYFK 904          
BLAST of mRNA_L-digitata_M_contig10040.2.1 vs. uniprot
Match: A0A6H5JX87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX87_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 6.890e-75
Identity = 269/602 (44.68%), Postives = 343/602 (56.98%), Query Frame = 0
Query:    1 MHAPVGLALLESWIDTSTAHAE-----SFAAHADRERAEEVLLLFTGENRETADNALA-----LWKTIEEWRTEPSASDEYQQLGRSILNNKFASSSSAMGTTTNIKGTDHLPG--GEVGGALAGSEPGFSIGNSNSSSSSLGTTNQKNASMLRVHPTEFPPSEED----TIINPLGFEEASWRALVSLSGV-VGRAFLTSVAYAGYLDEMGRPRREAIKAAATGIAKRRRAESLAEARELREAAFVRAREAMVDDLAENALTLFVRGTGTETETAATSTGFLGDLVDGQAALLSVVIIAERSAFVKIISAVWNEAINEAAAAESTASLEQRKVSPAIADTLSEAASAVARSRVMDKLIDDRVLDLTGPQGELWADARAMAAVADGVGYRVRCDVIEDMLEASVFELQESGEVERLMSDA---------ERRRGEEA--EAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSVDAQGDIASTAFTADVAVTDDTCLSVAGXXXXXXXXALGFLHGKEDAAVVVQSAWRRKAVYRAVRTLVAQNFVKLYDPAYGTFYWYNQATGESTWEKPAIIDAYFK 574
            M  PVGLA+ E ++  + A AE     S    A  +    V     G   +++  A A     +WK I+ WR   S    +QQLG +I+ ++             I G D L    GE+G A  G++P   +              + N S  R  P+  PP   D    T ++P   EEAS+RA+V LS   VG AFL S  Y  YLD + +P R+A++AAA  IA    AE  AEAR LR+AA  R +EA V+ LA  A  L ++G        A     LG L+D QA+LL+VVIIAERS F K+ISAVWNE ++EAA      +LE R++ P +A  LSEAA ++ARSR+MD+LID   +DLTGP+G+LWADAR   AVADG+GY+V           +V EL  SGE E LMS+A         E R G EA  EA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + + +G +   A  AD     +  +   G          G +  + +AAV++QSA RRKA YR ++ +VAQNF+++YDP  G FYWYNQAT ESTW+KPAIID YFK
Sbjct:  454 MRDPVGLAVFEEFVKAAAAAAEPDGKGSSTRQASSDEQPPVKQRNQGFTPDSSVGAAARDTLDVWKAIQAWRLVSSDQKRFQQLGEAIIVSRTKYPHLPDDVRVAIGG-DQLRRLFGELG-AKHGAKPNKKL-----------LPGRANHSSTRQRPS--PPRSGDGARVTTVDPSALEEASFRAVVFLSKCQVGLAFLGSAPYRTYLDGVHKPTRDAVEAAAAEIAAAEEAEWAAEARSLRKAALDREQEAQVESLANQATRLVLQG--------AVGASLLGGLIDDQASLLAVVIIAERSTFAKVISAVWNETVDEAA---HLIALENREIDPRVASALSEAACSLARSRIMDELIDQCGVDLTGPEGDLWADARPTEAVADGLGYQVXXXXXXXXXXXAVLELAASGEAEELMSEAALARRRREGELREGGEATDEADRVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVLVGADEVRGGLEE-AGGADGEXXREGSIDRTGGSSGRSSG--GSMLAETEAAVLMQSALRRKAAYREMKKVVAQNFIRMYDPGEGAFYWYNQATMESTWDKPAIIDLYFK 1026          
BLAST of mRNA_L-digitata_M_contig10040.2.1 vs. uniprot
Match: A0A835Z292_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z292_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.980e-7
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:  515 AAVVVQSAWRRKAVYRAVRTLVAQNFVKLYDPAYGTFYWYNQATGESTWEKPAIIDAYFK 574
            AAV +QS  R     R +R L+A ++VKLYD   G +YWYN ATG S+WEKP I+  +++
Sbjct:  990 AAVAIQSMIRGMHARRQMRALIAASYVKLYDAESGFWYWYNSATGASSWEKPVIVQRFYR 1049          
BLAST of mRNA_L-digitata_M_contig10040.2.1 vs. uniprot
Match: D8LE76_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE76_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 5.960e-5
Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 0
Query:  505 ALGFLHGKEDAAVVVQSAWRRKAVYRAVRTLVAQNFVKLYDPAYGTFYWYNQATGESTWEKPAIIDA 571
            A+   + +E+AAV++Q+AWRR+   R  R L+A    K++D + G  Y++N  +GE++W KPA+  A
Sbjct:   76 AIAPTYTEEEAAVMLQAAWRRRRGIRMTRALLASVVSKVFDESTGAHYYFNGLSGETSWSKPALFGA 142          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10040.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FPZ0_ECTSI1.310e-7742.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JX87_9PHAE6.890e-7544.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z292_9STRA3.980e-748.33WW domain-containing protein n=1 Tax=Tribonema min... [more]
D8LE76_ECTSI5.960e-538.81Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 535..568
e-value: 9.4E-4
score: 28.5
IPR001202WW domainPFAMPF00397WWcoord: 542..566
e-value: 6.3E-8
score: 32.6
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 549..568
score: 8.5122
IPR001202WW domainCDDcd00201WWcoord: 541..566
e-value: 2.15387E-4
score: 36.737
NoneNo IPR availableGENE3D2.20.70.10coord: 531..571
e-value: 8.5E-7
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..419
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..134
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 541..567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10040contigL-digitata_M_contig10040:4840..7610 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10040.2.1mRNA_L-digitata_M_contig10040.2.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig10040 2587..7610 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig10040.2.1 ID=prot_L-digitata_M_contig10040.2.1|Name=mRNA_L-digitata_M_contig10040.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=574bp
MHAPVGLALLESWIDTSTAHAESFAAHADRERAEEVLLLFTGENRETADN
ALALWKTIEEWRTEPSASDEYQQLGRSILNNKFASSSSAMGTTTNIKGTD
HLPGGEVGGALAGSEPGFSIGNSNSSSSSLGTTNQKNASMLRVHPTEFPP
SEEDTIINPLGFEEASWRALVSLSGVVGRAFLTSVAYAGYLDEMGRPRRE
AIKAAATGIAKRRRAESLAEARELREAAFVRAREAMVDDLAENALTLFVR
GTGTETETAATSTGFLGDLVDGQAALLSVVIIAERSAFVKIISAVWNEAI
NEAAAAESTASLEQRKVSPAIADTLSEAASAVARSRVMDKLIDDRVLDLT
GPQGELWADARAMAAVADGVGYRVRCDVIEDMLEASVFELQESGEVERLM
SDAERRRGEEAEAAGNAARAGDSAAAAAAAAAAEEEEGLSEATGGAVVVA
TPLVVLGAAEAAQQEEPSVDAQGDIASTAFTADVAVTDDTCLSVAGGGGG
GGGGALGFLHGKEDAAVVVQSAWRRKAVYRAVRTLVAQNFVKLYDPAYGT
FYWYNQATGESTWEKPAIIDAYFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf