mRNA_L-digitata_M_contig99918.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig99918.1.1
Unique NamemRNA_L-digitata_M_contig99918.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: A0A3C1KRH4_9GAMM (HlyD family secretion protein n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KRH4_9GAMM)

HSP 1 Score: 536 bits (1380), Expect = 1.460e-190
Identity = 291/299 (97.32%), Postives = 297/299 (99.33%), Query Frame = 1
Query:    1 MSQLLHRRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            MSQLL RRLLMGAGL+AGALAVAWFALGG+GSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRA YQLSRTRITAPA+GTVAN+VPQLGEMT+AGFAVVTLMATD+IWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV
Sbjct:    1 MSQLLQRRLLMGAGLVAGALAVAWFALGGQGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRARYQLSRTRITAPAAGTVANEVPQLGEMTVAGFAVVTLMATDDIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 299          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: A0A2N5Y7U1_9GAMM (HlyD family secretion protein n=2 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y7U1_9GAMM)

HSP 1 Score: 391 bits (1005), Expect = 1.150e-133
Identity = 206/284 (72.54%), Postives = 244/284 (85.92%), Query Frame = 1
Query:   55 ALAVA---WFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            ALA+A   WF+LGGR S+STENAY+KA KLAL+ EV++++K VLV  NQPV+ GQLLVQLED+PF+LAV+EAEAHLAQV+NQI+ RRADYAE+EAE++QA +DA +YQRQL RNQ +GP+AISE+ LD+SRQ L RS+A+IAIN QKLA LRAALGG PDV L AQADIQVAQAQLDRALYQLSRTRI AP  G +ANDVPQ GEM+ AGF++++++ T  +W+EANLKETQL  +RPGQ AEV IDAYPGQ LRA V +LS ASGSEFAMIPAQNASGNWVKV
Sbjct:    6 ALAIALGLWFSLGGRNSVSTENAYIKAGKLALAGEVSSVIKTVLVAANQPVSQGQLLVQLEDQPFRLAVSEAEAHLAQVRNQILGRRADYAEIEAELQQARQDADYYQRQLARNQNLGPAAISESQLDESRQLLTRSRARIAINLQKLASLRAALGGGPDVALAAQADIQVAQAQLDRALYQLSRTRIEAPVDGVIANDVPQAGEMSPAGFSLISMLDTSELWVEANLKETQLEHIRPGQTAEVKIDAYPGQRLRAEVASLSAASGSEFAMIPAQNASGNWVKV 289          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: A0A2D8IWG6_9GAMM (Multidrug transporter n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D8IWG6_9GAMM)

HSP 1 Score: 360 bits (924), Expect = 2.900e-121
Identity = 188/293 (64.16%), Postives = 234/293 (79.86%), Query Frame = 1
Query:   19 RRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            R L MGAG+    L   W   GGRGS+STENAY+KA+KLALSSEV+  +  V V+ +Q V AGQLLVQ+ED P+++AVAEAEA+LA V+NQ+  RRADY EV A + QA  D AFY+RQL R+++MGPSAISE++LD +RQ+LAR+++QIAI  Q+L+ LRA LGGSP+ PLEAQAD++VAQAQLDRA YQL RTRITAP +GT+AN+VPQ+GEM   G  ++T+M T  +W+EANLKETQL  +R GQ A V +DAYPG  L A V++LSPASGSEFA+IPAQNASGNWVKV
Sbjct:    9 RHLSMGAGIAVAGLVTLWLVFGGRGSVSTENAYLKADKLALSSEVSGKIVEVPVRAHQAVEAGQLLVQIEDTPYRIAVAEAEANLALVRNQVEARRADYQEVAANLEQARSDTAFYERQLARSEKMGPSAISESELDQARQELARARSQIAITTQQLSALRAELGGSPEAPLEAQADVRVAQAQLDRARYQLERTRITAPVAGTIANEVPQVGEMAHGGLPLLTVMDTHTVWVEANLKETQLEHIRAGQPASVEVDAYPGLTLEAEVESLSPASGSEFALIPAQNASGNWVKV 301          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: A0A3L7DUW6_9GAMM (HlyD family efflux transporter periplasmic adaptor subunit n=2 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7DUW6_9GAMM)

HSP 1 Score: 356 bits (913), Expect = 1.650e-119
Identity = 182/293 (62.12%), Postives = 237/293 (80.89%), Query Frame = 1
Query:   19 RRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            RRL  GAG+        W  L GRG++ TENAYVKANK +LS++V   + AV V+PNQ V+ GQ+LVQL+D PF++AVAEAEAHLAQV N I+ RRADYAE EA+++QA EDA++++R+L RN++MGP A+SE+ LD++RQQL+ ++  IA+NRQKL+ L+A LGG P++P+E QADI VAQAQLD A Y+LSRT + APA G VAN+VPQ+GEM  AGF++++++ T ++W+EANLKETQL  VRPGQ A VT+DAYPG+  RA V++LSPASGSEFA+IPAQNASGNWVKV
Sbjct:   12 RRLGFGAGIAVATAVALWCVLSGRGAVVTENAYVKANKYSLSADVAGRIAAVPVRPNQSVSQGQVLVQLDDTPFRIAVAEAEAHLAQVSNDILARRADYAEAEAQLQQAREDASYFERKLARNEKMGPVAVSESQLDEARQQLSAARXXIAVNRQKLSRLKAELGGDPELPVEQQADIMVAQAQLDDARYKLSRTTLVAPADGIVANEVPQVGEMAPAGFSLISMIGTADVWVEANLKETQLAAVRPGQPARVTVDAYPGREWRAEVESLSPASGSEFALIPAQNASGNWVKV 304          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: UPI0019D34A7C (HlyD family secretion protein n=2 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D34A7C)

HSP 1 Score: 352 bits (902), Expect = 7.960e-118
Identity = 186/293 (63.48%), Postives = 230/293 (78.50%), Query Frame = 1
Query:   19 RRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            RRL +G G L  A   AW  LGG GS+ TENAY+KA+K+AL+++V  IV  V V+ NQ V  GQLLV+L+  PF+LAVAEAEAHL QV+NQ++ RRADYAEV A + QA+ DA FYQRQL RN++MGP+A+SEA LD++RQ LAR+ +QIAINRQKL+ L A LGG    PLE QAD+QVAQAQLDRA YQLSRT + APA G +AN+VPQ+GEM  +G  ++++++T++ W+EANLKETQL  V PGQ A V IDAYP    RA V++LSPASGSEFA+IPAQNASGNWVKV
Sbjct:    9 RRLGLGGGALVAAGVAAWLLLGGAGSVHTENAYIKADKIALATDVGGIVTDVTVRANQRVERGQLLVRLDATPFRLAVAEAEAHLGQVKNQLLARRADYAEVAAALEQAQRDADFYQRQLQRNEKMGPAAVSEAQLDEARQALARAHSQIAINRQKLSSLAAELGGDSGTPLEQQADLQVAQAQLDRARYQLSRTEVFAPADGIIANEVPQVGEMVPSGLTLISMLSTEDTWVEANLKETQLAGVEPGQRATVVIDAYPDTQWRAVVESLSPASGSEFALIPAQNASGNWVKV 301          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: UPI001F365B0E (HlyD family secretion protein n=1 Tax=Microbulbifer sp. TT37 TaxID=2904250 RepID=UPI001F365B0E)

HSP 1 Score: 350 bits (898), Expect = 4.480e-117
Identity = 178/287 (62.02%), Postives = 232/287 (80.84%), Query Frame = 1
Query:   37 AGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            AG+L   L   W   GGRG++ TENAYVKA+K+AL+ EV+ ++  V V+PNQPV  G LL++L+D PF+LAV EAE HLAQV+NQ++ RRADYAE EA + QA +DA F++RQL RN+++G  A+SEA LD+SRQ+L  ++AQIAIN +KL+ LRA LGG+P +PLE QAD++VAQA+LD+A YQLSRT ITAPA G VAN+VPQ+GEM  AG ++++++  +++W+EANLKETQL  VR GQ AEVT+DAYPG   +A+VD+LSPASGSEFA+IP QNASGNWVKV
Sbjct:   29 AGILVALLVAGWCLFGGRGTVETENAYVKADKIALAPEVSGVISIVAVRPNQPVKRGDLLLKLDDTPFRLAVEEAEGHLAQVRNQLLARRADYAEAEAAVEQARKDADFFRRQLERNEKLGRKALSEAQLDESRQKLDHARAQIAINTEKLSSLRAELGGNPMIPLEEQADLKVAQAKLDKARYQLSRTEITAPADGLVANEVPQVGEMAPAGVSLISMLGGESMWVEANLKETQLARVRAGQQAEVTLDAYPGFTWQAQVDSLSPASGSEFALIPPQNASGNWVKV 315          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: A0A7W2TWU9_9GAMM (HlyD family secretion protein n=2 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2TWU9_9GAMM)

HSP 1 Score: 344 bits (883), Expect = 5.300e-115
Identity = 179/293 (61.09%), Postives = 231/293 (78.84%), Query Frame = 1
Query:   19 RRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            R+L   AG++  A   AW  LGGRGS+ T+NAY+KA+K++L++EV  ++  V V+ NQ V +GQLL++L++ PFQLAV EAEAHL QV+NQ++ RRADYAE EA + QA  DAAFYQRQL RN++MGP AISE  LD+++Q L+R++AQIAIN+QKL+ L AALGG    PLE QAD+QVAQAQLD+ALYQLSRT I AP  G +AN+ PQ+GEM  AG  +++++++ + W+EANLKETQL +V+ GQ A V IDAYPG    A V++LSPASGSEFA+IPAQNASGNWVKV
Sbjct:   10 RQLSFAAGIIVSAAVTAWLLLGGRGSVHTDNAYIKASKVSLATEVGGVIAEVTVRANQSVKSGQLLLRLDNTPFQLAVDEAEAHLNQVKNQLLSRRADYAEAEAALEQARRDAAFYQRQLQRNEKMGPLAISEVQLDEAKQALSRARAQIAINQQKLSSLAAALGGDNTTPLEQQADLQVAQAQLDKALYQLSRTEIYAPIDGVIANETPQVGEMVPAGLTLISMISSTDTWVEANLKETQLAEVQAGQAATVVIDAYPGVEWTAIVESLSPASGSEFALIPAQNASGNWVKV 302          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: A0A5C9A170_9GAMM (HlyD family secretion protein n=3 Tax=Parahaliea TaxID=1857932 RepID=A0A5C9A170_9GAMM)

HSP 1 Score: 343 bits (879), Expect = 1.700e-114
Identity = 183/294 (62.24%), Postives = 228/294 (77.55%), Query Frame = 1
Query:   16 HRRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
             RRL  GAG+L  A  VAW   GG+GS+ ++NAYVKA+KLAL+++V  IV  V V+ N+ V  GQLLV+L+D PF+LAV EAEAHL QV+NQ+  R ADYAE EA + QA  DA +YQRQL RN++MGP AISE+ LD++RQ L+R+++QIAINRQKL+ L A LGG  D PLE  ADI+VAQAQLDRA YQLSRT + AP  G VAN+VPQ+GEM  +G  +V+++++++ W+E NLKETQL DVR GQ A V +DAYPG    A VD+LSPASGSEFA+IPAQNASGNWVKV
Sbjct:    7 RRRLGFGAGILTAAAVVAWLVYGGQGSVHSDNAYVKADKLALATDVGGIVAEVRVRANERVERGQLLVRLDDTPFRLAVEEAEAHLGQVRNQLQSRIADYAEAEAALEQAGRDADYYQRQLQRNEKMGPVAISESQLDEARQALSRARSQIAINRQKLSSLAAELGGGVDTPLEQHADIKVAQAQLDRARYQLSRTAVYAPVDGIVANEVPQVGEMVPSGLTLVSMLSSEDTWVEVNLKETQLADVRTGQHARVVVDAYPGVEWDAVVDSLSPASGSEFALIPAQNASGNWVKV 300          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: A0A5C9A542_9GAMM (HlyD family secretion protein n=2 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A542_9GAMM)

HSP 1 Score: 339 bits (869), Expect = 4.720e-113
Identity = 178/289 (61.59%), Postives = 225/289 (77.85%), Query Frame = 1
Query:   31 MGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            M AG++  A   AW   GGRGS+ TENAY+KA+ L+L+++V  IV  V V+ NQ V  GQLL +LED PF+LAVAEAEAHL QV+N+++ RRADYAE EA ++QA+ DA +YQRQL RN++MGP AISEA LD++RQQLAR+ +QIAINR+KL+ L A LGG    PLE QAD++VAQAQLD A Y+LSRT I AP  G +AN+VP++GEM  +G  ++ +++T++ W+EANLKETQL  V  GQ A VTIDAYPG    A VD++SPASGSEFA+IPAQNASGNWVKV
Sbjct:    1 MSAGVVTAAAVAAWLTFGGRGSVHTENAYIKADILSLATDVGGIVAEVPVEANQRVARGQLLARLEDTPFRLAVAEAEAHLHQVRNELLSRRADYAEAEAALQQAQRDADYYQRQLGRNEKMGPIAISEAQLDEARQQLARAHSQIAINREKLSSLAAELGGDNTTPLEDQADLKVAQAQLDNARYKLSRTEIYAPVDGLIANEVPKVGEMAPSGLTLINMLSTEDTWVEANLKETQLAGVAAGQKATVTIDAYPGVKWEATVDSVSPASGSEFALIPAQNASGNWVKV 289          
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Match: UPI001E5AFAE9 (HlyD family secretion protein n=1 Tax=Microbulbifer celer TaxID=435905 RepID=UPI001E5AFAE9)

HSP 1 Score: 338 bits (868), Expect = 1.430e-112
Identity = 183/293 (62.46%), Postives = 229/293 (78.16%), Query Frame = 1
Query:   19 RRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSEVNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMVRRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLARSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSRTRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTDVRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV 897
            R L   AG+LA A   AW   GG G + TENAYVKA+KL+L+ EV+ IV  V+V+ NQ V+ G +LV+L+D PF+LAVAEAEAHLAQ++NQI  R+A+YAE EA + QA+EDA +Y+RQL RN+++G  A+SEA LD+SRQ L ++ A+IAIN +KLA LRA LGG+  VPLE QAD+ VAQAQLD+A YQLSRTRI AP SG +AND PQ+GEM  AG AVV+++ T+ +WIEANLKETQL  VR GQ AEV++DAYPG   +A V +L+ ASGSEFA+IP QNASGNWVKV
Sbjct:   15 RTLGFAAGILAAAAVTAWCIWGGAGRVHTENAYVKADKLSLAPEVSGIVAEVMVKANQAVSKGDVLVKLDDTPFRLAVAEAEAHLAQMKNQIHARQAEYAEAEAALAQAQEDADYYRRQLGRNEKLGKVALSEAQLDESRQMLKQASAKIAINTEKLASLRAELGGNSRVPLEQQADVMVAQAQLDKARYQLSRTRIVAPVSGVIANDAPQVGEMAPAGMAVVSMLDTEAMWIEANLKETQLEKVRAGQQAEVSVDAYPGVKFQALVASLAAASGSEFALIPPQNASGNWVKV 307          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99918.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1KRH4_9GAMM1.460e-19097.32HlyD family secretion protein n=6 Tax=Halieaceae T... [more]
A0A2N5Y7U1_9GAMM1.150e-13372.54HlyD family secretion protein n=2 Tax=Kineobactrum... [more]
A0A2D8IWG6_9GAMM2.900e-12164.16Multidrug transporter n=2 Tax=Haliea sp. TaxID=193... [more]
A0A3L7DUW6_9GAMM1.650e-11962.12HlyD family efflux transporter periplasmic adaptor... [more]
UPI0019D34A7C7.960e-11863.48HlyD family secretion protein n=2 Tax=Parahaliea m... [more]
UPI001F365B0E4.480e-11762.02HlyD family secretion protein n=1 Tax=Microbulbife... [more]
A0A7W2TWU9_9GAMM5.300e-11561.09HlyD family secretion protein n=2 Tax=Sediminihali... [more]
A0A5C9A170_9GAMM1.700e-11462.24HlyD family secretion protein n=3 Tax=Parahaliea T... [more]
A0A5C9A542_9GAMM4.720e-11361.59HlyD family secretion protein n=2 Tax=Parahaliea m... [more]
UPI001E5AFAE91.430e-11262.46HlyD family secretion protein n=1 Tax=Microbulbife... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99918contigL-digitata_M_contig99918:1..897 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121937.AUHJ01000020_gene1275
Preferred nameemrA
PFAMsBiotin_lipoyl_2,HlyD_3,HlyD_D23
Model size897
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K03543
KEGG TC8.A.1.1
KEGG ModuleM00701
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.96e-190
EggNOG OGsCOG1566@1|root,COG1566@2|Bacteria,1MU7I@1224|Proteobacteria,1RMAD@1236|Gammaproteobacteria,466Y4@72275|Alteromonadaceae
DescriptionHlyD membrane-fusion protein of T1SS
Cds size897
COG categoryV
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408659.2436695-CDS-L-digitata_M_contig99918:0..8971682408659.2436695-CDS-L-digitata_M_contig99918:0..897Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig99918 1..897 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99918.1.1prot_L-digitata_M_contig99918.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig99918 1..897 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig99918.1.1

>prot_L-digitata_M_contig99918.1.1 ID=prot_L-digitata_M_contig99918.1.1|Name=mRNA_L-digitata_M_contig99918.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=299bp
MSQLLHRRLLMGAGLLAGALAVAWFALGGRGSISTENAYVKANKLALSSE
VNAIVKAVLVQPNQPVTAGQLLVQLEDEPFQLAVAEAEAHLAQVQNQIMV
RRADYAEVEAEIRQAEEDAAFYQRQLTRNQRMGPSAISEADLDDSRQQLA
RSQAQIAINRQKLAGLRAALGGSPDVPLEAQADIQVAQAQLDRALYQLSR
TRITAPASGTVANDVPQLGEMTMAGFAVVTLMATDNIWIEANLKETQLTD
VRPGQMAEVTIDAYPGQVLRARVDTLSPASGSEFAMIPAQNASGNWVKV
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mRNA from alignment at L-digitata_M_contig99918:1..897-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig99918.1.1 ID=mRNA_L-digitata_M_contig99918.1.1|Name=mRNA_L-digitata_M_contig99918.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=897bp|location=Sequence derived from alignment at L-digitata_M_contig99918:1..897- (Laminaria digitata LdigPH10_18mv male)
ATGTCACAGCTGCTACACAGGCGCCTGCTGATGGGCGCGGGCCTGCTCGC CGGAGCCCTGGCAGTTGCCTGGTTCGCGCTGGGTGGACGCGGCAGCATCA GCACCGAGAACGCCTATGTGAAAGCCAACAAGCTGGCCCTGTCCAGCGAG GTGAATGCCATCGTCAAGGCGGTGCTGGTGCAGCCCAACCAGCCGGTTAC CGCAGGGCAGCTGCTGGTGCAACTGGAAGACGAGCCGTTCCAGCTCGCCG TGGCAGAGGCCGAAGCACATCTGGCGCAGGTACAGAACCAGATCATGGTG CGCCGCGCCGATTACGCCGAGGTAGAAGCCGAGATTCGCCAGGCCGAGGA AGACGCCGCGTTTTACCAGCGCCAGCTAACACGCAATCAGCGCATGGGGC CTTCGGCGATCTCCGAGGCAGATCTTGATGATTCGCGGCAGCAGCTGGCG CGCTCACAGGCGCAAATCGCGATCAACCGGCAGAAGCTTGCCGGCCTGCG CGCCGCGTTGGGCGGCAGCCCCGATGTGCCGCTGGAAGCCCAGGCCGACA TACAGGTGGCACAGGCGCAGCTGGACCGCGCCCTCTATCAGCTGTCGCGC ACTCGCATCACGGCACCGGCATCCGGCACAGTAGCCAATGACGTACCCCA GCTCGGTGAGATGACCATGGCCGGTTTTGCAGTCGTCACCTTGATGGCAA CGGACAATATCTGGATTGAAGCCAACCTCAAGGAAACGCAGCTGACAGAT GTGCGCCCGGGGCAAATGGCCGAGGTCACAATAGATGCTTATCCCGGCCA GGTACTGCGCGCCCGGGTGGATACCCTGAGCCCCGCCAGCGGTTCGGAGT TCGCCATGATTCCGGCACAGAACGCCAGCGGCAACTGGGTCAAGGTC
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Coding sequence (CDS) from alignment at L-digitata_M_contig99918:1..897-

>mRNA_L-digitata_M_contig99918.1.1 ID=mRNA_L-digitata_M_contig99918.1.1|Name=mRNA_L-digitata_M_contig99918.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=897bp|location=Sequence derived from alignment at L-digitata_M_contig99918:1..897- (Laminaria digitata LdigPH10_18mv male)
ATGTCACAGCTGCTACACAGGCGCCTGCTGATGGGCGCGGGCCTGCTCGC
CGGAGCCCTGGCAGTTGCCTGGTTCGCGCTGGGTGGACGCGGCAGCATCA
GCACCGAGAACGCCTATGTGAAAGCCAACAAGCTGGCCCTGTCCAGCGAG
GTGAATGCCATCGTCAAGGCGGTGCTGGTGCAGCCCAACCAGCCGGTTAC
CGCAGGGCAGCTGCTGGTGCAACTGGAAGACGAGCCGTTCCAGCTCGCCG
TGGCAGAGGCCGAAGCACATCTGGCGCAGGTACAGAACCAGATCATGGTG
CGCCGCGCCGATTACGCCGAGGTAGAAGCCGAGATTCGCCAGGCCGAGGA
AGACGCCGCGTTTTACCAGCGCCAGCTAACACGCAATCAGCGCATGGGGC
CTTCGGCGATCTCCGAGGCAGATCTTGATGATTCGCGGCAGCAGCTGGCG
CGCTCACAGGCGCAAATCGCGATCAACCGGCAGAAGCTTGCCGGCCTGCG
CGCCGCGTTGGGCGGCAGCCCCGATGTGCCGCTGGAAGCCCAGGCCGACA
TACAGGTGGCACAGGCGCAGCTGGACCGCGCCCTCTATCAGCTGTCGCGC
ACTCGCATCACGGCACCGGCATCCGGCACAGTAGCCAATGACGTACCCCA
GCTCGGTGAGATGACCATGGCCGGTTTTGCAGTCGTCACCTTGATGGCAA
CGGACAATATCTGGATTGAAGCCAACCTCAAGGAAACGCAGCTGACAGAT
GTGCGCCCGGGGCAAATGGCCGAGGTCACAATAGATGCTTATCCCGGCCA
GGTACTGCGCGCCCGGGTGGATACCCTGAGCCCCGCCAGCGGTTCGGAGT
TCGCCATGATTCCGGCACAGAACGCCAGCGGCAACTGGGTCAAGGTC
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