mRNA_L-digitata_M_contig99845.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A520NQH4_9PROT (Guanylate kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NQH4_9PROT) HSP 1 Score: 137 bits (344), Expect = 7.330e-39 Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 MADTDGHIERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
MADT G IERRGLMLVLSSPSGAGKTTISRLLLE D++ISLSVS+TTRPKRPGEVDG+DYHF++ +F LMLNR+ELLE AK F
Sbjct: 1 MADTSGRIERRGLMLVLSSPSGAGKTTISRLLLERDNDISLSVSITTRPKRPGEVDGMDYHFLDLTEFNLMLNRRELLEHAKVF 84
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A2S6Q9Q8_9PROT (Guanylate kinase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q9Q8_9PROT) HSP 1 Score: 127 bits (320), Expect = 3.110e-35 Identity = 62/84 (73.81%), Postives = 72/84 (85.71%), Query Frame = 1
Query: 1 MADTDGHIERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
M D + +ERRGLMLVLSSPSGAGKTTISR++LE D+ ISLS+SVTTRPKRPGEVDG DYHF++ +F LMLNR+ELLE AK F
Sbjct: 1 MDDMESRVERRGLMLVLSSPSGAGKTTISRMVLERDEEISLSISVTTRPKRPGEVDGRDYHFVDRTEFNLMLNRRELLEHAKVF 84
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A2D8PQP9_9PROT (Guanylate kinase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQP9_9PROT) HSP 1 Score: 127 bits (319), Expect = 4.400e-35 Identity = 65/84 (77.38%), Postives = 71/84 (84.52%), Query Frame = 1
Query: 1 MADTDGHIERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
M + G IERRGLMLVLSSPSGAGKTTISRLLLE D NISLSVSVTTR KRPGEV+ DY+F++P +F LMLNRQELLE AK F
Sbjct: 1 MTEERGEIERRGLMLVLSSPSGAGKTTISRLLLERDKNISLSVSVTTRTKRPGEVEARDYYFVDPTEFNLMLNRQELLEHAKVF 84
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A7Y0DZ29_9PROT (Guanylate kinase n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0DZ29_9PROT) HSP 1 Score: 121 bits (303), Expect = 1.200e-32 Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 1
Query: 22 IERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
I RRGLMLVLSSPSGAGK+TISR +LE+DDNIS+SVSVTTRPKRPGEVDGV YHFI+ +F LM+NR +LLE AK F
Sbjct: 11 IRRRGLMLVLSSPSGAGKSTISRAILEDDDNISMSVSVTTRPKRPGEVDGVHYHFIDKTEFDLMVNRGQLLEHAKVF 87
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A523FZD3_9PROT (Guanylate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FZD3_9PROT) HSP 1 Score: 120 bits (302), Expect = 1.530e-32 Identity = 59/81 (72.84%), Postives = 70/81 (86.42%), Query Frame = 1
Query: 10 TDGHIERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
++G I RRG+MLVLSSPSGAGKTTISRLLLE DDN+++SVSVTTRPKR GEV+G+DY F++P F LM+NRQE LE AK F
Sbjct: 2 SNGGIGRRGVMLVLSSPSGAGKTTISRLLLECDDNLTMSVSVTTRPKRRGEVEGIDYRFVDPTTFNLMVNRQEFLESAKVF 82
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A2E5V422_9PROT (Guanylate kinase n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E5V422_9PROT) HSP 1 Score: 119 bits (297), Expect = 8.710e-32 Identity = 57/77 (74.03%), Postives = 65/77 (84.42%), Query Frame = 1
Query: 22 IERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
IERRGLMLVLSSPSGAGKTTISRLLLE D N+S+S+S TTRP RPGE DG DY+F++P +F LM+NR E LE AK F
Sbjct: 6 IERRGLMLVLSSPSGAGKTTISRLLLERDSNLSMSISTTTRPMRPGEEDGCDYNFVDPTEFNLMVNRHEFLEHAKVF 82
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A7C9K7A7_9PROT (Guanylate kinase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9K7A7_9PROT) HSP 1 Score: 118 bits (295), Expect = 2.250e-31 Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 1
Query: 16 GHIERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
G I RRGLML+LSSPSGAGKTTISRLLLE D+N+ +SVS TTR KRPGEV+GVDYHF++P F L +NR+E LE AK F
Sbjct: 14 GAIRRRGLMLILSSPSGAGKTTISRLLLEKDENLEMSVSATTRQKRPGEVEGVDYHFVDPTTFNLKVNRREFLEYAKVF 92
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A858R5F6_9PROT (Guanylate kinase n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R5F6_9PROT) HSP 1 Score: 117 bits (294), Expect = 3.340e-31 Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 1
Query: 4 ADTDGHIERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
A G I RRGLMLVLSSPSGAGKTTISR +LE+D N+S+SVSVTTR KRPGEV G DY FI+P +F LM+NR+ELLE AK F
Sbjct: 12 AGLPGDIRRRGLMLVLSSPSGAGKTTISRRMLESDGNLSMSVSVTTRAKRPGEVHGKDYFFIDPTEFNLMVNRRELLEHAKVF 94
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: A0A516H687_9PROT (Guanylate kinase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A516H687_9PROT) HSP 1 Score: 117 bits (292), Expect = 5.190e-31 Identity = 59/77 (76.62%), Postives = 65/77 (84.42%), Query Frame = 1
Query: 22 IERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
I RRGLMLVLSSPSGAGKTTISR LL D ++ LSVSVTTR +RPGEVDG YHFI+ +DFGLM+NRQELLE AK F
Sbjct: 8 IARRGLMLVLSSPSGAGKTTISRRLLAEDPDLHLSVSVTTRARRPGEVDGTHYHFISSEDFGLMVNRQELLEHAKVF 84
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Match: UPI00048C9392 (guanylate kinase n=2 Tax=Nisaea TaxID=390876 RepID=UPI00048C9392) HSP 1 Score: 116 bits (290), Expect = 1.070e-30 Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 1
Query: 22 IERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKRPGEVDGVDYHFINPDDFGLMLNRQELLEDAKGF 252
++RRGLMLVLSSPSGAGKT+ISR LLE +D +++SVS TTRP+RPGEVDGVDYHFI+ DF LM+NR E LE AK F
Sbjct: 9 VQRRGLMLVLSSPSGAGKTSISRRLLETEDELTMSVSATTRPRRPGEVDGVDYHFIDQTDFQLMINRGEFLEYAKVF 85 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99845.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig99845.1.1 >prot_L-digitata_M_contig99845.1.1 ID=prot_L-digitata_M_contig99845.1.1|Name=mRNA_L-digitata_M_contig99845.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=84bp MADTDGHIERRGLMLVLSSPSGAGKTTISRLLLENDDNISLSVSVTTRPKback to top mRNA from alignment at L-digitata_M_contig99845:3..254- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig99845.1.1 ID=mRNA_L-digitata_M_contig99845.1.1|Name=mRNA_L-digitata_M_contig99845.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=252bp|location=Sequence derived from alignment at L-digitata_M_contig99845:3..254- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig99845:3..254- >mRNA_L-digitata_M_contig99845.1.1 ID=mRNA_L-digitata_M_contig99845.1.1|Name=mRNA_L-digitata_M_contig99845.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=252bp|location=Sequence derived from alignment at L-digitata_M_contig99845:3..254- (Laminaria digitata LdigPH10_18mv male)back to top |