mRNA_L-digitata_M_contig9980.6.2 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: D8LIX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX3_ECTSI) HSP 1 Score: 386 bits (992), Expect = 3.840e-123 Identity = 192/229 (83.84%), Postives = 206/229 (89.96%), Query Frame = 1
Query: 1 QVDAYVIKSSELNFKPVHDATGKIKTGTVGPWACERHECTGDMQLQTFRKGAGDNLLTGLSMKDYFDSRHTLADKVMRASAGGGTDETAAATP--GPGTFFNFGERSRENQKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKVFKRGELEPELFLVNPEYGSSKRMRKVSV 681
QVDAYVIKSS LNFKPV D +GK+KTGTVGPWACE +ECTGDMQLQ FRKGAGDNLL+GLSMK+YFD R TL +KVMRA GG AATP GPG+ FNFGERS ++QKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGV+AAVTFDNCKVFK GELEPELFLV P+Y SS+RM+KV+V
Sbjct: 980 QVDAYVIKSSALNFKPVKDYSGKLKTGTVGPWACEMYECTGDMQLQAFRKGAGDNLLSGLSMKNYFDVRQTLEEKVMRAGGNGGEGSGVAATPSSGPGSLFNFGERSAQSQKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVYAAVTFDNCKVFKPGELEPELFLVKPDYSSSRRMQKVAV 1208
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A0A6H5L593_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L593_9PHAE) HSP 1 Score: 380 bits (976), Expect = 1.470e-118 Identity = 188/226 (83.19%), Postives = 203/226 (89.82%), Query Frame = 1
Query: 1 QVDAYVIKSSELNFKPVHDATGKIKTGTVGPWACERHECTGDMQLQTFRKGAGDNLLTGLSMKDYFDSRHTLADKVMRASAGGGTDETAAATP--GPGTFFNFGERSRENQKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKVFKRGELEPELFLVNPEYGSSKRMRK 672
QVDAYVIKSS LNFKPV D +GK+KTGTVGPWACE +ECTGDMQLQ FRKGAGDNLL+GLSMK+YFD R TL +KVMRA GG AATP GPG+ FNFGERS ++QKAKMLAKLNTPHKRFEKKIKASMWMSQ+FPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGV+AAVTFDNCK+FK GELEPELFLV P+Y SS+RM+K
Sbjct: 1226 QVDAYVIKSSALNFKPVKDYSGKLKTGTVGPWACEMYECTGDMQLQAFRKGAGDNLLSGLSMKNYFDVRQTLEEKVMRAGGDGGEASGVAATPSSGPGSLFNFGERSAQSQKAKMLAKLNTPHKRFEKKIKASMWMSQEFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVYAAVTFDNCKIFKPGELEPELFLVKPDYSSSRRMQK 1451
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A0A835YZ10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ10_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.420e-15 Identity = 57/208 (27.40%), Postives = 97/208 (46.63%), Query Frame = 1
Query: 43 KPVHDATGKIKTG----TVGPWACERHECTGDMQLQTFRK-GAGDNLLTGLSMKDYFDSRHTLADKVMRASAGGGTDETAAATPGPGTFFNFGERSRENQKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLE------------------VLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKV 597
+P ++GK+ G +G W C +++ G++ + T+ K GA L + DYF + +A AA HK ++++A MWM+ FPL+L+H+ P+L+ VL+++D+ + ++ ++L G+REAGFP ++SLPLYLGVFA V+FD C++
Sbjct: 321 RPPPGSSGKMVQGGTEAVMGGWPCTKYQGVGEVSVGTYTKSGAQGGALRRVREDDYFAAAXXXXXXXXXTAAA-----DAAGXXXXXXXXXXXXXXXXXXXXXXXXXXGVRHKATVRELRADMWMACGFPLSLDHILPVLQASAAAAATNILFVVVCEPVLAVEDRNMQQVLDLLRADGVREAGFPLRLSLPLYLGVFAEVSFDCCEM 523
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A0A0K9P2N4_ZOSMR (Ankyrin repeat protein-like n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P2N4_ZOSMR) HSP 1 Score: 64.3 bits (155), Expect = 2.900e-8 Identity = 31/87 (35.63%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 352 NTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKVFKRGE 612
N ++K +K +W++ DFPL +E + P+L+VL+ + K I +L+E+LTTK M + FPAK+++P+ + VTF + K +
Sbjct: 470 NKHESEYKKGLKPVLWLTPDFPLQIEEILPLLDVLANKVKAIRRLRELLTTK-MPQGTFPAKIAIPIVPTIRVLVTFTKFEELKSSD 555
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A0A151S7Q3_CAJCA (Ankyrin repeat domain-containing protein 13B n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S7Q3_CAJCA) HSP 1 Score: 63.2 bits (152), Expect = 6.630e-8 Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 370 FEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF--------DNCKVFKRGELEPELFLVNPEYGSS 657
F++ + ++W+SQ+FPL +E + PML++L+ + K + +L+E+LTTK +E+ FP KV++P+ V VTF +N F+ P N E G S
Sbjct: 369 FKRGMMPALWLSQNFPLKIEELLPMLDILAEKLKAVRRLRELLTTKLPKES-FPVKVAIPVVSTVRVLVTFNKFEEIQQENADEFESAPSSPTSGQENSEEGDS 471
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A0A388K4G6_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4G6_CHABU) HSP 1 Score: 63.2 bits (152), Expect = 7.300e-8 Identity = 29/88 (32.95%), Postives = 56/88 (63.64%), Query Frame = 1
Query: 319 ENQKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF 582
E++K ++P + K +K ++W++ DFPLT++ + P+L+++S + K + +L+E+LTTK + FP KV++P+ + VTF
Sbjct: 510 ESRKGGSRPSSSSPESEYVKGLKPTLWLTDDFPLTVQELLPLLDLMSPRVKAVRRLRELLTTK-LPTGSFPVKVAIPIVPTIRVVVTF 596
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A9VBY7_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VBY7_MONBE) HSP 1 Score: 62.4 bits (150), Expect = 1.170e-7 Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 385 KASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKVFKRGELEPELFLVNPEY 648
+A++WM Q FPLT+EH+ +LE ++ D +IH + L + GFP K+ +P++ V A VTF + F+ +E ELF + +Y
Sbjct: 400 RATLWMHQGFPLTIEHLVTLLEAVAPTDPMIHSMTTFLQQR--LPPGFPVKLDIPVFPTVSARVTFHH---FEERAIEAELFAIPKDY 482
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: K7N264_SOYBN (Uncharacterized protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7N264_SOYBN) HSP 1 Score: 62.0 bits (149), Expect = 1.640e-7 Identity = 38/125 (30.40%), Postives = 66/125 (52.80%), Query Frame = 1
Query: 208 HTLADKVMRASAGGGTDETAAATPGPGTFFNFGERSRENQKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF 582
H A K + +GG D T +F + E+Q F++ + ++W+SQ+FPL ++ + PML++L+ + K + +L+E+LTTK +E+ FP KV++P+ V VTF
Sbjct: 360 HNRAKKEKKGRSGGHRDHKERKTNSAQPAEHFVNQKGESQ--------------FKRGMMPALWLSQNFPLKIDELLPMLDILAEKLKAVRRLRELLTTKLPKES-FPVKVAIPVVSTVRVLVTF 469
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A0A371HZ19_MUCPR (Ankyrin repeat domain-containing protein 13B (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371HZ19_MUCPR) HSP 1 Score: 62.0 bits (149), Expect = 1.660e-7 Identity = 29/85 (34.12%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 370 FEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKVFKRGELEPE 624
F++ + ++W+SQ+FPL ++ + PML++L+ + K + +L+E+LTTK ++ FP KV++P+ V VTF + +R +++ E
Sbjct: 411 FKRGMMPALWLSQNFPLQIDELLPMLDILAEKLKAVRRLRELLTTKLPKDT-FPVKVAIPVVSTVRVLVTFTKFEELQREQVDDE 494
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Match: A0A445AHB3_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445AHB3_ARAHY) HSP 1 Score: 62.0 bits (149), Expect = 1.980e-7 Identity = 30/71 (42.25%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 370 FEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF 582
F+K + S+W+SQ++PL +E + P+L++LS + K + +++EVLTTK ++ FP KVS+P+ V VTF
Sbjct: 1042 FKKGMNPSLWLSQNYPLKIEELFPLLDILSEKVKAVRRVREVLTTKLPKDT-FPVKVSIPVISTVRVLVTF 1111 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9980.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig9980.6.2 >prot_L-digitata_M_contig9980.6.2 ID=prot_L-digitata_M_contig9980.6.2|Name=mRNA_L-digitata_M_contig9980.6.2|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=236bp QVDAYVIKSSELNFKPVHDATGKIKTGTVGPWACERHECTGDMQLQTFRKback to top mRNA from alignment at L-digitata_M_contig9980:6630..9304- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig9980.6.2 ID=mRNA_L-digitata_M_contig9980.6.2|Name=mRNA_L-digitata_M_contig9980.6.2|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=2675bp|location=Sequence derived from alignment at L-digitata_M_contig9980:6630..9304- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig9980:6630..9304- >mRNA_L-digitata_M_contig9980.6.2 ID=mRNA_L-digitata_M_contig9980.6.2|Name=mRNA_L-digitata_M_contig9980.6.2|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=708bp|location=Sequence derived from alignment at L-digitata_M_contig9980:6630..9304- (Laminaria digitata LdigPH10_18mv male)back to top |