mRNA_L-digitata_M_contig99786.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig99786.1.1
Unique NamemRNA_L-digitata_M_contig99786.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: W5YTK5_9GAMM (Type II secretion system protein E n=12 Tax=Marinobacteraceae TaxID=2887365 RepID=W5YTK5_9GAMM)

HSP 1 Score: 623 bits (1606), Expect = 7.220e-221
Identity = 315/316 (99.68%), Postives = 316/316 (100.00%), Query Frame = 1
Query:    1 STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDG+LHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY
Sbjct:   13 STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGVLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 328          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: A0A1D9GKH1_9GAMM (Type II secretion system protein E n=1 Tax=Marinobacter salinus TaxID=1874317 RepID=A0A1D9GKH1_9GAMM)

HSP 1 Score: 545 bits (1405), Expect = 2.840e-190
Identity = 277/317 (87.38%), Postives = 297/317 (93.69%), Query Frame = 1
Query:    1 STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLG-ASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            STLTLRD+CTALVT GEI+QEDAERVL+ NIG  + G+G A++RHPL+LVA A L SQKTGRTLDLDRL+QWLAEWA QPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIG DE+L+ASTEPFKN+WE NLRQAV KDIRRVVANPEDIRRYTVEFYQLASSVSKAGG  +++ AG QNFEQLLDLG +SE+PDANDQHVVKIVDWLLQYAFDQRASDIHIEPRR VTQVRFRIDG+LHNVYEFP+ VGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMV+RIFDPEVLLKSY
Sbjct:   18 STLTLRDVCTALVTSGEISQEDAERVLTTNIGTSS-GAGQATRRHPLDLVAMAALTSQKTGRTLDLDRLSQWLAEWAGQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGRDEILVASTEPFKNEWESNLRQAVGKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGGQSSSGAGNQNFEQLLDLGTSSENPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRAVTQVRFRIDGVLHNVYEFPEHVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVMRIFDPEVLLKSY 333          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: A0A4Z1C606_9GAMM (Type II/IV secretion system protein n=2 Tax=Marinobacter TaxID=2742 RepID=A0A4Z1C606_9GAMM)

HSP 1 Score: 536 bits (1381), Expect = 1.050e-186
Identity = 268/316 (84.81%), Postives = 293/316 (92.72%), Query Frame = 1
Query:    1 STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            STLTLRD+CTALV   EITQED +RV+SANIG  +    PAS++HPLEL+AKAGL+S ++GRTLDLD L+QWLA+WA+Q YYHIDPLKIDTPAIA+VMSYAFAQRHGILAVEIG DEVLIAS EPFK+DWE NLRQAV+KDIRRVVANPEDIRRYTVEFYQLA+SVSKA GN     AG+QNFEQLLDLGA+++PDANDQHVVKIVDWLLQYAFDQRASDIHIEPRR VTQVRFRIDG+LHNVYEFP+QVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMV+RIFDPEVLLKS+
Sbjct:   13 STLTLRDLCTALVASKEITQEDGDRVMSANIGAGSDTGHPASRKHPLELIAKAGLQSLQSGRTLDLDTLSQWLAKWADQTYYHIDPLKIDTPAIAQVMSYAFAQRHGILAVEIGRDEVLIASAEPFKSDWEANLRQAVQKDIRRVVANPEDIRRYTVEFYQLANSVSKASGNRGGAAAGSQNFEQLLDLGANQNPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRTVTQVRFRIDGVLHNVYEFPEQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVMRIFDPEVLLKSF 328          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: UPI001C635F14 (type II/IV secretion system protein n=4 Tax=Marinobacter TaxID=2742 RepID=UPI001C635F14)

HSP 1 Score: 531 bits (1368), Expect = 1.160e-184
Identity = 266/316 (84.18%), Postives = 292/316 (92.41%), Query Frame = 1
Query:    1 STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            STLTLRD+CTALVT GEI+Q+DAERVL+AN+G  T G+G A++RHPLELVA A L S++T R LDLDRLTQWLA+WA QPYYHIDPL+ID PAIA+VMSYAFAQRHGILAVEI  DEVL+AS EPFK+DW+GNLRQA+RKDIRRVVANPEDIRRYTVEFYQLA+SVSKAGG+ ++   G QNFEQLLDLG SE+PDANDQHVVKIVDWLLQYAFDQRASDIHIEPRR VTQVRFRIDG+LHNVYEFP+ VGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDN EVELRLATMPTAFGEKMV+RIFDP+VLLKSY
Sbjct:   19 STLTLRDVCTALVTSGEISQDDAERVLTANLGAAT-GTGQAAKRHPLELVAIAALTSRRTDRALDLDRLTQWLADWAGQPYYHIDPLRIDAPAIAKVMSYAFAQRHGILAVEIHPDEVLVASPEPFKSDWQGNLRQALRKDIRRVVANPEDIRRYTVEFYQLANSVSKAGGSQSSGTGGNQNFEQLLDLGTSENPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRAVTQVRFRIDGVLHNVYEFPEHVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNREVELRLATMPTAFGEKMVMRIFDPDVLLKSY 333          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: A1TZ38_MARN8 (Type II secretion system protein E n=29 Tax=Marinobacteraceae TaxID=2887365 RepID=A1TZ38_MARN8)

HSP 1 Score: 523 bits (1348), Expect = 1.100e-181
Identity = 267/315 (84.76%), Postives = 285/315 (90.48%), Query Frame = 1
Query:    4 TLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            TLTLRDIC+ALV  GEITQ+DAE+VL+AN+G  + G+G   QRHPLELVA A L SQ+ GRTLDL+RLT WLA W  Q YYHIDPLKIDTPAIARVMSYAFAQRHGILAVEI  +EV+IASTEPFK +WE NLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKA G  +   AG QNFEQLLDLGASE+PDANDQHVVKIVDWLLQYAFDQRASDIHIEPRR VTQVRFRIDG+LHNVYEFP+ VGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMV+RIFDPEVLLKS+
Sbjct:   16 TLTLRDICSALVESGEITQQDAEKVLTANLGAAS-GAGHTPQRHPLELVAIAALTSQRDGRTLDLERLTHWLARWGGQDYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEITPNEVVIASTEPFKREWESNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKASGGQSPGGAGNQNFEQLLDLGASENPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRTVTQVRFRIDGVLHNVYEFPEHVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVMRIFDPEVLLKSF 329          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: A0A072N5K3_9GAMM (Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Marinobacter nitratireducens TaxID=1137280 RepID=A0A072N5K3_9GAMM)

HSP 1 Score: 522 bits (1344), Expect = 4.160e-181
Identity = 263/315 (83.49%), Postives = 291/315 (92.38%), Query Frame = 1
Query:    7 LTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNA-ANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            L+LRD+CTALV+ GEITQ+DAERVLSAN+G  +GGS   ++RHPLELVA AGL S+ +GRTLDLD LT+WLA WA+QPYYHIDPLKIDTPAIA+VMSYAFAQRHGILAV+IG  EV+IAS EPFK+DWEGNL QAVRKDIRRVVANPEDIRRYTVEFYQLA+SVSKAGG       AG+QNFEQLLDLG++E+PDANDQHVV+IVDWLLQYAFDQRASDIHIEPRR VTQVRFRIDG+LHNVYEFP+ VG+AVTSRLKILGRLNVAEKRRPQDGRIKTRKPDN+EVELRLATMPTAFGEKMV+RIFDP+VLLKSY
Sbjct:   14 LSLRDLCTALVSSGEITQDDAERVLSANLGSVSGGS-QGAKRHPLELVAIAGLTSRSSGRTLDLDTLTKWLAGWADQPYYHIDPLKIDTPAIAQVMSYAFAQRHGILAVDIGAHEVVIASAEPFKSDWEGNLGQAVRKDIRRVVANPEDIRRYTVEFYQLANSVSKAGGQQTPGGSAGSQNFEQLLDLGSNENPDANDQHVVRIVDWLLQYAFDQRASDIHIEPRRGVTQVRFRIDGVLHNVYEFPEHVGIAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNNEVELRLATMPTAFGEKMVMRIFDPDVLLKSY 327          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: R8AXG2_9GAMM (Type IV-A pilus assembly ATPase PilB n=4 Tax=Marinobacter TaxID=2742 RepID=R8AXG2_9GAMM)

HSP 1 Score: 520 bits (1340), Expect = 1.380e-180
Identity = 264/316 (83.54%), Postives = 284/316 (89.87%), Query Frame = 1
Query:    1 STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            STLTLRD+ TALVT GEI+QE+A+R+L AN+   T       +RHPLELVA+A L+S K+G  LDL+RLTQWLAEWA QP+YHIDPLKIDTP+IARVMSYAFAQRHGILAVEI  DEVLIAS EPFK+DWE NLRQAV+KDI RVVANPEDIRRYTVEFYQLA+SVSKAGG      AG QNFEQLLDLGASE+PDANDQHVVKIVDWLLQYAFDQRASDIHIEPRR +TQVRFRIDG+LHNVYEFP QVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMV+RIFDPEVLLKSY
Sbjct:   12 STLTLRDLATALVTSGEISQEEADRILKANMAADT------DRRHPLELVAQASLKSLKSGHNLDLERLTQWLAEWAGQPWYHIDPLKIDTPSIARVMSYAFAQRHGILAVEIRPDEVLIASAEPFKSDWESNLRQAVQKDIHRVVANPEDIRRYTVEFYQLANSVSKAGGRQGGGSAGNQNFEQLLDLGASENPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRTITQVRFRIDGVLHNVYEFPGQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVMRIFDPEVLLKSY 321          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: A0A1I6I3N6_9GAMM (General secretion pathway protein E n=30 Tax=Marinobacter TaxID=2742 RepID=A0A1I6I3N6_9GAMM)

HSP 1 Score: 520 bits (1340), Expect = 1.980e-180
Identity = 263/314 (83.76%), Postives = 287/314 (91.40%), Query Frame = 1
Query:    7 LTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            LTLRD+C ALV+ GEIT+EDAERVLSAN+G  +GG+    +RHPLELVA A   SQ +GRTLDLDRLTQWLA+WA+QPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEI  DEV+IAS EPF +DWE NL+QAVRKDIRRVVANPEDIRRYTVE YQLA+SV+KA G  A   AG+QNFEQLLDLGA+E+PDANDQHVVKIVDWLLQYAFDQRASDIHIEPRR VTQVRFRIDG+LHNVYEFP+ VGVAVTSRLKILGRLNVAEKR+PQDGRIKTRKPDNSEVELRLATMPTAFGEKMV+RIFDP+VLLK+Y
Sbjct:   21 LTLRDLCDALVSSGEITREDAERVLSANLGAASGGT--TGRRHPLELVAIAAPTSQTSGRTLDLDRLTQWLADWAQQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEITRDEVVIASAEPFVSDWEHNLQQAVRKDIRRVVANPEDIRRYTVELYQLANSVNKASGGQAPGKAGSQNFEQLLDLGANENPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRAVTQVRFRIDGVLHNVYEFPEHVGVAVTSRLKILGRLNVAEKRKPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVMRIFDPDVLLKTY 332          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: A0A5P9EKT4_9GAMM (Type II secretion system protein E n=14 Tax=Marinobacter TaxID=2742 RepID=A0A5P9EKT4_9GAMM)

HSP 1 Score: 518 bits (1333), Expect = 2.070e-179
Identity = 263/315 (83.49%), Postives = 284/315 (90.16%), Query Frame = 1
Query:    4 TLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            TLTLRDIC+ALV  GEI+Q+DAE+VL+AN+G  T   G  S RHPLELVA A + S + GRTLDLDRLT WLA WA Q YYHIDPLKIDTPAIARVMSYAFAQRHGILAVEI +DEVLIASTEPFK +WE NLRQA+RKDIRRVVANPEDIRRYTVEFYQLA+SVSKA G+ A   A  QNFEQLLD+G++E+PDANDQHVVKIVDWLLQYAFDQRASDIHIEPRR VTQVRFRIDG+LHNVYEFP+ VGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMV+RIFDPEVLLKS+
Sbjct:   16 TLTLRDICSALVESGEISQQDAEKVLTANLGAAT-QDGRTSPRHPLELVAIASITSLRDGRTLDLDRLTSWLARWAGQDYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIRQDEVLIASTEPFKTEWESNLRQAIRKDIRRVVANPEDIRRYTVEFYQLANSVSKASGSQAPGAASNQNFEQLLDIGSNENPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRAVTQVRFRIDGVLHNVYEFPEHVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVMRIFDPEVLLKSF 329          
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Match: A0A5B0VH77_9GAMM (Type II/IV secretion system protein n=1 Tax=Marinobacter salinexigens TaxID=2919747 RepID=A0A5B0VH77_9GAMM)

HSP 1 Score: 517 bits (1332), Expect = 2.570e-179
Identity = 259/314 (82.48%), Postives = 287/314 (91.40%), Query Frame = 1
Query:    7 LTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELVAKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSYAFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPEDIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQHVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQVGVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVLRIFDPEVLLKSY 948
            LTLRD+CTALV+ GEI+Q+DA+RVLSAN+G   GGS  A++RHPLEL+A AGL S ++GR L  + LT+WLAEWA QPYYHIDPLKIDTPAIA+VMSYAFAQRHGILAVEI  DEV+IAS +PFKNDWEGNL QAVRK IRRVVANPEDIRR+TVEFYQLASSVSKAGG  ++    TQNFEQLLDLG+SE+PDANDQHVV+IVDWLLQYAFDQRASDIHIEPRR VT+VRFRIDG+LH+VYEFP+ VG+AVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMV+RIFDPEVLLKSY
Sbjct:   13 LTLRDLCTALVSRGEISQDDADRVLSANLGAAAGGS-QATRRHPLELIAIAGLNSLRSGRALGQEELTRWLAEWANQPYYHIDPLKIDTPAIAKVMSYAFAQRHGILAVEINHDEVVIASADPFKNDWEGNLSQAVRKTIRRVVANPEDIRRFTVEFYQLASSVSKAGGQQSSAAGNTQNFEQLLDLGSSENPDANDQHVVRIVDWLLQYAFDQRASDIHIEPRRGVTRVRFRIDGVLHSVYEFPEHVGMAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGEKMVMRIFDPEVLLKSY 325          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99786.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W5YTK5_9GAMM7.220e-22199.68Type II secretion system protein E n=12 Tax=Marino... [more]
A0A1D9GKH1_9GAMM2.840e-19087.38Type II secretion system protein E n=1 Tax=Marinob... [more]
A0A4Z1C606_9GAMM1.050e-18684.81Type II/IV secretion system protein n=2 Tax=Marino... [more]
UPI001C635F141.160e-18484.18type II/IV secretion system protein n=4 Tax=Marino... [more]
A1TZ38_MARN81.100e-18184.76Type II secretion system protein E n=29 Tax=Marino... [more]
A0A072N5K3_9GAMM4.160e-18183.49Type II secretory pathway, ATPase PulE/Tfp pilus a... [more]
R8AXG2_9GAMM1.380e-18083.54Type IV-A pilus assembly ATPase PilB n=4 Tax=Marin... [more]
A0A1I6I3N6_9GAMM1.980e-18083.76General secretion pathway protein E n=30 Tax=Marin... [more]
A0A5P9EKT4_9GAMM2.070e-17983.49Type II secretion system protein E n=14 Tax=Marino... [more]
A0A5B0VH77_9GAMM2.570e-17982.48Type II/IV secretion system protein n=1 Tax=Marino... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99786contigL-digitata_M_contig99786:2..949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog443152.MDG893_09441
Preferred namegspE
PFAMsT2SSE,T2SSE_N
Model size948
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K02454
KEGG TC3.A.15
KEGG Pathwayko03070,ko05111,map03070,map05111
KEGG ModuleM00331
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.19e-219
EggNOG OGsCOG2804@1|root,COG2804@2|Bacteria,1MU7V@1224|Proteobacteria,1RMBS@1236|Gammaproteobacteria,4662Z@72275|Alteromonadaceae
DescriptionCOG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
Cds size948
COG categoryNU
BRITEko00000,ko00001,ko00002,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408657.9306264-CDS-L-digitata_M_contig99786:1..9491682408657.9306264-CDS-L-digitata_M_contig99786:1..949Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig99786 2..949 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99786.1.1prot_L-digitata_M_contig99786.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig99786 2..949 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig99786.1.1

>prot_L-digitata_M_contig99786.1.1 ID=prot_L-digitata_M_contig99786.1.1|Name=mRNA_L-digitata_M_contig99786.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=316bp
STLTLRDICTALVTGGEITQEDAERVLSANIGIQTGGSGPASQRHPLELV
AKAGLESQKTGRTLDLDRLTQWLAEWAEQPYYHIDPLKIDTPAIARVMSY
AFAQRHGILAVEIGEDEVLIASTEPFKNDWEGNLRQAVRKDIRRVVANPE
DIRRYTVEFYQLASSVSKAGGNNAANPAGTQNFEQLLDLGASEHPDANDQ
HVVKIVDWLLQYAFDQRASDIHIEPRRNVTQVRFRIDGMLHNVYEFPDQV
GVAVTSRLKILGRLNVAEKRRPQDGRIKTRKPDNSEVELRLATMPTAFGE
KMVLRIFDPEVLLKSY
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mRNA from alignment at L-digitata_M_contig99786:2..949+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig99786.1.1 ID=mRNA_L-digitata_M_contig99786.1.1|Name=mRNA_L-digitata_M_contig99786.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=948bp|location=Sequence derived from alignment at L-digitata_M_contig99786:2..949+ (Laminaria digitata LdigPH10_18mv male)
AGTACCTTGACCCTGAGGGATATCTGCACGGCGCTGGTCACCGGTGGTGA GATTACCCAGGAGGATGCCGAACGGGTTCTCTCGGCCAACATTGGTATCC AGACAGGGGGCAGCGGGCCCGCTAGCCAGCGCCACCCACTGGAACTGGTC GCCAAGGCCGGGTTGGAGAGCCAGAAAACCGGCCGCACCCTGGATCTGGA CAGACTGACCCAGTGGCTCGCGGAGTGGGCGGAACAGCCCTACTACCACA TCGACCCCCTGAAGATAGATACACCCGCGATTGCCCGGGTGATGTCCTAT GCCTTTGCCCAGCGACACGGCATTCTCGCGGTTGAAATAGGTGAGGATGA AGTTCTCATCGCCAGCACCGAACCCTTCAAGAATGACTGGGAAGGCAACC TGCGCCAGGCGGTGAGAAAAGACATCCGCCGCGTGGTCGCCAACCCCGAG GATATCCGCCGTTACACCGTTGAGTTCTATCAACTGGCAAGCTCTGTCAG CAAGGCAGGCGGCAACAACGCAGCCAACCCCGCCGGTACCCAGAATTTCG AGCAACTGCTGGACCTTGGGGCCAGCGAACACCCGGATGCCAACGACCAG CACGTGGTCAAGATTGTTGACTGGCTGCTGCAGTACGCCTTCGACCAACG CGCATCGGATATCCACATAGAACCACGGCGCAATGTCACCCAGGTGCGCT TTCGCATCGATGGGATGCTGCACAACGTCTACGAATTCCCGGACCAGGTC GGCGTGGCCGTGACCAGCCGCCTGAAGATTCTCGGCAGGCTGAACGTGGC GGAAAAGCGCCGCCCCCAGGACGGCCGCATAAAAACCCGAAAGCCGGACA ACAGCGAGGTGGAATTGCGGCTGGCCACCATGCCAACCGCGTTTGGCGAG AAGATGGTGTTGCGGATATTTGATCCGGAAGTGCTGTTGAAGTCCTAC
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Coding sequence (CDS) from alignment at L-digitata_M_contig99786:2..949+

>mRNA_L-digitata_M_contig99786.1.1 ID=mRNA_L-digitata_M_contig99786.1.1|Name=mRNA_L-digitata_M_contig99786.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=948bp|location=Sequence derived from alignment at L-digitata_M_contig99786:2..949+ (Laminaria digitata LdigPH10_18mv male)
AGTACCTTGACCCTGAGGGATATCTGCACGGCGCTGGTCACCGGTGGTGA
GATTACCCAGGAGGATGCCGAACGGGTTCTCTCGGCCAACATTGGTATCC
AGACAGGGGGCAGCGGGCCCGCTAGCCAGCGCCACCCACTGGAACTGGTC
GCCAAGGCCGGGTTGGAGAGCCAGAAAACCGGCCGCACCCTGGATCTGGA
CAGACTGACCCAGTGGCTCGCGGAGTGGGCGGAACAGCCCTACTACCACA
TCGACCCCCTGAAGATAGATACACCCGCGATTGCCCGGGTGATGTCCTAT
GCCTTTGCCCAGCGACACGGCATTCTCGCGGTTGAAATAGGTGAGGATGA
AGTTCTCATCGCCAGCACCGAACCCTTCAAGAATGACTGGGAAGGCAACC
TGCGCCAGGCGGTGAGAAAAGACATCCGCCGCGTGGTCGCCAACCCCGAG
GATATCCGCCGTTACACCGTTGAGTTCTATCAACTGGCAAGCTCTGTCAG
CAAGGCAGGCGGCAACAACGCAGCCAACCCCGCCGGTACCCAGAATTTCG
AGCAACTGCTGGACCTTGGGGCCAGCGAACACCCGGATGCCAACGACCAG
CACGTGGTCAAGATTGTTGACTGGCTGCTGCAGTACGCCTTCGACCAACG
CGCATCGGATATCCACATAGAACCACGGCGCAATGTCACCCAGGTGCGCT
TTCGCATCGATGGGATGCTGCACAACGTCTACGAATTCCCGGACCAGGTC
GGCGTGGCCGTGACCAGCCGCCTGAAGATTCTCGGCAGGCTGAACGTGGC
GGAAAAGCGCCGCCCCCAGGACGGCCGCATAAAAACCCGAAAGCCGGACA
ACAGCGAGGTGGAATTGCGGCTGGCCACCATGCCAACCGCGTTTGGCGAG
AAGATGGTGTTGCGGATATTTGATCCGGAAGTGCTGTTGAAGTCCTAC
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