mRNA_L-digitata_M_contig9971.4.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: D7G095_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G095_ECTSI) HSP 1 Score: 199 bits (507), Expect = 2.100e-56 Identity = 94/127 (74.02%), Postives = 108/127 (85.04%), Query Frame = 2
Query: 44 PRQLFSVDKAEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQRVSSV 424
P + SVDKAEDRSFLTKT++HCADLSGQVLD LALEWGRRIL+EFR+QA E GLP TT+ASGDLETT+KGQHFFA KIVKPLWEPFVALFP L+ LL +LN NC+YY+QE RLE+QR+S+
Sbjct: 677 PEHILSVDKAEDRSFLTKTILHCADLSGQVLDNHLALEWGRRILDEFRLQARLEANTGLPRTTVASGDLETTIKGQHFFAEKIVKPLWEPFVALFPKLKPLLKSLNRNCEYYRQEGLRLERQRLSAA 803
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: D7G099_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G099_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.280e-55 Identity = 96/123 (78.05%), Postives = 105/123 (85.37%), Query Frame = 2
Query: 53 LFSVDKAEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQRVSS 421
LFSVDKAEDRSFLTKT++HCADLSGQVLD LALEWGRRIL+EFR+QA E AGLPLTT+ASGD ETTMKGQHFFA KIVKPLW+PF LFP L LL NLN NCDYY QE RLE+QR+S+
Sbjct: 1002 LFSVDKAEDRSFLTKTILHCADLSGQVLDNHLALEWGRRILDEFRLQARLEGTAGLPLTTVASGDRETTMKGQHFFATKIVKPLWQPFAVLFPKLAPLLENLNNNCDYYHQEWLRLEQQRLSA 1124
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: A0A6H5KY22_9PHAE (Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY22_9PHAE) HSP 1 Score: 196 bits (497), Expect = 1.050e-54 Identity = 93/127 (73.23%), Postives = 106/127 (83.46%), Query Frame = 2
Query: 44 PRQLFSVDKAEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQRVSSV 424
P +FSVDKAEDR FLTKT++HCADLSGQ+LD LALEWGRRILEEFR+QA E GLP TT+ASGDLETT+KGQ FFA KIVKPLWEPFVALFP L+ LL LN NC+YY+QE RLE+QR+S+
Sbjct: 928 PEHIFSVDKAEDRLFLTKTILHCADLSGQLLDNHLALEWGRRILEEFRLQARLEANTGLPRTTVASGDLETTIKGQRFFAEKIVKPLWEPFVALFPELKPLLKGLNRNCEYYRQEGLRLEQQRLSAA 1054
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: A0A835YJJ2_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJJ2_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.810e-28 Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 2
Query: 65 DKAEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFR------------IQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRL 400
D EDR+ L + ++HCADLSGQV+ T +ALEWGRRIL+EFR Q+D E + GLP+T + + +KGQ FF KIV PLWEP ALFP L HL NL+ N +YY+ ++L
Sbjct: 1667 DSLEDRASLVELLVHCADLSGQVMTTPVALEWGRRILQEFRNQXXXXXXXXXXXQSDAEERLGLPITFVQISEESEIIKGQLFFLGKIVAPLWEPVAALFPELAHLRTNLDRNLEYYEDAIAKL 1790
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: A0A7S3UUD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUD2_HETAK) HSP 1 Score: 109 bits (272), Expect = 1.100e-26 Identity = 60/123 (48.78%), Postives = 76/123 (61.79%), Query Frame = 2
Query: 44 PRQLFSVDKAEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTM-KGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQ 409
PR F AEDR L V+HCADL+GQ L LALEWGRR+L EF+ QA+ E + GLPLT A G E + KGQ FF KI+ PL++ VA+FP + NL N YY E+ RL+++
Sbjct: 5 PRPPFDRADAEDRLRLLAGVVHCADLTGQALPRALALEWGRRVLAEFQAQAEKEDRLGLPLT-FARGSTELELVKGQIFFIEKILDPLFQALVAIFPRCKAFTKNLRDNQRYYAHESKRLQQK 126
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: A0A1W0A9L1_9STRA (Phosphodiesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9L1_9STRA) HSP 1 Score: 104 bits (260), Expect = 7.580e-23 Identity = 55/125 (44.00%), Postives = 72/125 (57.60%), Query Frame = 2
Query: 71 AEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEK----QRVSSVPPR 433
AEDR F ++++H +DL QV T +AL+W I +EF QA E GLP+T L D ++ QHFFAA++V+PLW V P LEH LVNL N +YQ E RL++ SS PR
Sbjct: 647 AEDRIFFVQSIVHASDLGAQVFPTPIALKWSNMIAKEFAYQALMETAEGLPVTHLHVDDPLHMVESQHFFAARLVQPLWNCLVRFLPQLEHCLVNLEKNIAHYQTEIRRLKQLSPTSSTSSYSPR 771
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: A0A6G0X0K6_9STRA (Phosphodiesterase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0K6_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.030e-22 Identity = 54/120 (45.00%), Postives = 71/120 (59.17%), Query Frame = 2
Query: 44 PRQLFSVDKAEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLE 403
P +FS EDR FL K ++H ADLS QV +AL+W I +EF QA E GLP+T + D ++ QHFFAA++V PLW V FP L+H +VNL N +Y+QE RL+
Sbjct: 661 PWTVFSKS-VEDRLFLVKAIVHAADLSAQVFPKPIALKWSNMIAKEFAYQALMESAEGLPVTHVHVDDPLLMVESQHFFAARLVAPLWISLVRFFPELDHCMVNLRDNIAHYEQEIRRLQ 779
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: T0QAR6_SAPDV (Phosphodiesterase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QAR6_SAPDV) HSP 1 Score: 103 bits (258), Expect = 1.420e-22 Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 2
Query: 74 EDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQRVSSVPPR 433
+DR FL +T++H +DL QV T +AL+W I +EF QA E GLP+T L D ++ QHFFAA++V+PLW V P L+H LVNL+ N +Y+QE RL++ +S PR
Sbjct: 686 DDRIFLVQTIVHASDLGAQVFPTPIALKWSNMIAKEFAYQALMETAEGLPVTHLHVDDPLHMVESQHFFAARLVQPLWSCLVRFLPKLDHRLVNLHKNIAHYEQEIRRLKQ--LSPHSPR 803
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: A0A1V9Z864_9STRA (Phosphodiesterase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z864_9STRA) HSP 1 Score: 101 bits (252), Expect = 9.000e-22 Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 2
Query: 71 AEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQRVSSVPPR 433
A+DR FL +T++H +DL QV T +AL+W I +EF QA E GLP+T L D ++ QHFFAA+IV+PLW V P L+H L NL N +Y+ E RL++ +S PR
Sbjct: 676 ADDRIFLVQTIVHASDLGAQVFPTPIALKWSNMIAKEFAYQALMETAEGLPVTHLHVDDPLHMVESQHFFAARIVQPLWHCLVRFLPKLDHCLGNLQKNIAHYESEIRRLKQ--LSPHSPR 794
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Match: A0A485LDF6_9STRA (Phosphodiesterase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDF6_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.670e-21 Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 2
Query: 71 AEDRSFLTKTVIHCADLSGQVLDTRLALEWGRRILEEFRIQADNEVKAGLPLTTLASGDLETTMKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQ 409
AEDR FL K ++H ADLSGQV +AL+W I +EF QA E GLP+T + D ++ QHFFA ++V PLW V FP L+H + NL N +Y+ E +RL+ +
Sbjct: 692 AEDRLFLVKALVHAADLSGQVFPKPIALKWSNMISKEFAYQALMESAEGLPVTHVHVDDPLLMVESQHFFAERLVAPLWISLVRYFPELDHCMTNLRGNIAHYEHEMARLKAE 804 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9971.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig9971.4.1 >prot_L-digitata_M_contig9971.4.1 ID=prot_L-digitata_M_contig9971.4.1|Name=mRNA_L-digitata_M_contig9971.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=81bp MKGQHFFAAKIVKPLWEPFVALFPALEHLLVNLNTNCDYYQQEASRLEKQback to top mRNA from alignment at L-digitata_M_contig9971:5616..9250- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig9971.4.1 ID=mRNA_L-digitata_M_contig9971.4.1|Name=mRNA_L-digitata_M_contig9971.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=3635bp|location=Sequence derived from alignment at L-digitata_M_contig9971:5616..9250- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig9971:5616..9250- >mRNA_L-digitata_M_contig9971.4.1 ID=mRNA_L-digitata_M_contig9971.4.1|Name=mRNA_L-digitata_M_contig9971.4.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=243bp|location=Sequence derived from alignment at L-digitata_M_contig9971:5616..9250- (Laminaria digitata LdigPH10_18mv male)back to top |