mRNA_L-digitata_M_contig99603.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A838IHE4_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IHE4_9DELT) HSP 1 Score: 337 bits (864), Expect = 8.480e-114 Identity = 170/260 (65.38%), Postives = 207/260 (79.62%), Query Frame = 1
Query: 4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALWD 783
P+A+TIAGSDSG GAG QADLKTFAA V GTSVLT+ITAQNTVGV + +L ++RAQY AV +DL P AAK GA+GS IG V ELL+++PID LVVDPVM++KHGE L+ + + L L++ A LV PNRHEA +TGR V+ P+SMKDAAK IFD GARNVLIKG HL++IVRD++YDG+GFVEFGADR+DS +HGSGCV +A+I ARL GD LLAAIE +REFIS AIE+AP++G GI+PVNP H LW+
Sbjct: 22 PIALTIAGSDSGGGAGIQADLKTFAALEVFGTSVLTMITAQNTVGVSEICVLDEQILRAQYNAVMTDLRPWAAKTGAMGSNTTIGIVAELLEEHPIDKLVVDPVMISKHGEQLLPDDACKALRERLMDKAFLVMPNRHEAAKLTGRTVEGPTSMKDAAKRIFDFGARNVLIKGGHLEKIVRDFYYDGSGFVEFGADRVDSGRLHGSGCVYAAAIVARLCLGDELLAAIEFSREFISGAIEKAPKLGAGISPVNPMHRLWE 281
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A4Y6Q353_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q353_9DELT) HSP 1 Score: 332 bits (851), Expect = 5.690e-112 Identity = 173/259 (66.80%), Postives = 201/259 (77.61%), Query Frame = 1
Query: 4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
P+A+TIAGSDSG GAG QADLK FAA VHG SVLTL+TAQNT GV + MLP +VRAQ+EAV DL PAAAK GALGSEA+IG V E L + PID LVVDPV+V+KHG+PLM E QR + +LE A+LVTPNRHEAEA+ GR V + +SMK+AAK I+D G ++VLIKG+H D+IVRD F+DGTGF+EFGADRIDS VHGSGCV SA ITARL+ D L AI R+FIS AIE AP +G GIAPVNP H W
Sbjct: 12 PVALTIAGSDSGGGAGIQADLKAFAACGVHGASVLTLVTAQNTQGVSGLEMLPEHLVRAQFEAVMGDLRPAAAKTGALGSEAVIGTVAEALSERPIDKLVVDPVIVSKHGDPLMPERAQRMIRDRMLEGAMLVTPNRHEAEALCGREVGNVASMKEAAKRIYDFGVQHVLIKGAHFDKIVRDIFFDGTGFIEFGADRIDSSRVHGSGCVYSAVITARLALEDELPEAIGFARDFISKAIENAPLVGRGIAPVNPMHEYW 270
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A5C6UPA3_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=5 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6UPA3_9DELT) HSP 1 Score: 328 bits (841), Expect = 2.650e-110 Identity = 170/261 (65.13%), Postives = 202/261 (77.39%), Query Frame = 1
Query: 1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRG-VDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
P +A+TIAGSDSG GAG QADLKTFAA V GTSVLTL+TAQNTVGV V M+ A+VRAQ +AV DL P AAK GALGSEAMIGCV+E L+D+P++ LVVDPVM++KHGEPLM + L +L HAL+VTPNR EA ++G V+S MK+AAK + GARNV+IKG H DRIVRD FYDG+GFVEFGADR+DS VHGSGC SA+I ARLS GD+L+ A+ REFIS AIE+AP+IG GI+PVNP H +W
Sbjct: 20 PAVALTIAGSDSGGGAGIQADLKTFAACGVFGTSVLTLLTAQNTVGVSSVEMVSEAMVRAQLDAVLGDLKPTAAKTGALGSEAMIGCVVEYLEDHPMERLVVDPVMISKHGEPLMPPSAFVALREKMLRHALIVTPNRFEAGNLSGMNEVESLQDMKEAAKRLHGAGARNVVIKGGHFDRIVRDVFYDGSGFVEFGADRVDSGRVHGSGCTFSAAICARLSRGDALVDAVAFAREFISEAIEKAPKIGEGISPVNPMHGVW 280
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A328C2Z0_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328C2Z0_9DELT) HSP 1 Score: 322 bits (826), Expect = 5.040e-108 Identity = 167/261 (63.98%), Postives = 203/261 (77.78%), Query Frame = 1
Query: 1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRG-VDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
P +A+TIAGSDSG GAG QADLKTFAA V GTS LTL+TAQNT GV LV M A+VRAQ +AV DL P+AAK GALG+EAMI ++E L+D+PI++LVVDPVM++KHGEPLM E+ L LL AL+VTPNR EA +TG G V+S + MK+AAK +F GAR+V+IKG H DRIVRD FYDG+GFVEFGADR+DS+ VHGSGC SA+I ARL+ D+L+ A+ REFIS AIE+APR+G GI+PVNP H +W
Sbjct: 20 PAVALTIAGSDSGGGAGIQADLKTFAACGVFGTSALTLLTAQNTQGVTLVEMASEAMVRAQLDAVLGDLKPSAAKTGALGTEAMISFLVEYLEDHPIESLVVDPVMISKHGEPLMPESAFASLREKLLPRALIVTPNRFEAAHLTGMGEVESLAEMKEAAKRLFGAGARHVVIKGGHFDRIVRDVFYDGSGFVEFGADRVDSKRVHGSGCTFSAAICARLARQDALVDAVAFAREFISEAIEKAPRLGEGISPVNPMHGVW 280
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A5B8XSF5_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XSF5_9DELT) HSP 1 Score: 320 bits (821), Expect = 2.710e-107 Identity = 165/262 (62.98%), Postives = 199/262 (75.95%), Query Frame = 1
Query: 1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALWDS 786
P +A+TIAGSDSG GAG QADLKTFAA +V GTSVLTL+TAQNT GV V MLP AV+RAQ+EAV SDL P AAK GALG++ +IG V E+L D PI+ LVVDPVMV+KHG+PLM E + ++ A+++TPNR EA A+ GR VD M++AAK IFD+GA VLIKG HLD IVRD YDGTGF EFGADRI S VHGSGC SA+ITA+L+ G ++ AA+E R+FI+ AI AP IG GIAPVNP H++W+S
Sbjct: 18 PAVALTIAGSDSGGGAGIQADLKTFAASKVFGTSVLTLVTAQNTQGVTAVEMLPDAVIRAQFEAVMSDLNPTAAKTGALGNDRVIGLVAEMLDDRPIEKLVVDPVMVSKHGDPLMPEQAVKAFIALMVPRAMIITPNRFEARALIGRDVDDVRDMQEAAKRIFDMGAPAVLIKGGHLDHIVRDILYDGTGFTEFGADRIRSPRVHGSGCTFSAAITAKLAEGATIEAALEYARDFITKAILMAPEIGEGIAPVNPMHSVWNS 279
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A2Z4FPN7_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FPN7_9DELT) HSP 1 Score: 310 bits (794), Expect = 4.320e-103 Identity = 160/259 (61.78%), Postives = 197/259 (76.06%), Query Frame = 1
Query: 4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALW 780
P+A+TIAGSD G GAG QADLKTF+A VHGTS++TLITAQNT+GV V +L ++RAQ+EA+ SD+ AAK GALG E + V E L+++PI+ LVVDPVM++KHG+ LM Q+ + LLE ALL TPNR EAEA++G V + +SMKDAA+ I D G +NVLIKG+H D+IVRD FYDG F+EFGADRIDS VHGSGC SA+ITARL+ GD+L+AAIE R+FIS AI APRIG GI+PVNP H W
Sbjct: 23 PIALTIAGSDCGGGAGLQADLKTFSACGVHGTSIVTLITAQNTLGVSAVEVLSKPLIRAQFEALSSDVRALAAKTGALGDERGVKIVAECLKEWPIEKLVVDPVMMSKHGDALMPPPAQKLVRDYLLEGALLCTPNRFEAEALSGHEVGNVASMKDAARRIHDFGVKNVLIKGAHFDKIVRDVFYDGRDFLEFGADRIDSDRVHGSGCTFSAAITARLARGDALVAAIEYARKFISAAIANAPRIGQGISPVNPMHEYW 281
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A523J085_9DELT (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523J085_9DELT) HSP 1 Score: 240 bits (612), Expect = 7.670e-76 Identity = 131/254 (51.57%), Postives = 166/254 (65.35%), Query Frame = 1
Query: 4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLD-RIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVN 762
P A+TIAGSDSG GAG QADLKTF V+GTS LTLITAQNT+GV VH+LP+ +VR Q EAV D AAK GALGS ++ V + +Y + LVVDPVM++KHG PL++ L + L+ A L+TPN HEA A+ G VDS + M+DAA+ + DLG VL+KG HL + D YDG F A R+D+ H HGSGC SA+ITA L+ G++LL A+ + FI+ AI AP +G G PVN
Sbjct: 6 PTALTIAGSDSGGGAGIQADLKTFQRFGVYGTSALTLITAQNTLGVQEVHLLPLELVRRQIEAVAKDFDVGAAKTGALGSVELVETVAWAVDEYALPKLVVDPVMISKHGNPLLAPEAVASLKQQLIPKASLITPNLHEAAALLGSSVDSEARMRDAARALHDLGPGAVLLKGGHLPGKEAVDLLYDGHEFERLAATRVDTPHTHGSGCTHSAAITALLARGETLLEAVRQAKAFITRAISSAPGLGGGHGPVN 259
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A3C1NJF1_9HYPH (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3C1NJF1_9HYPH) HSP 1 Score: 231 bits (589), Expect = 2.100e-72 Identity = 129/253 (50.99%), Postives = 160/253 (63.24%), Query Frame = 1
Query: 4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVN 762
P+A+TIAGSD GAG QADLKTF V+G SVLTL+T QNT VD V L V AQ ++V D+ P AAK GALG+ +I + + LVVDPVM++KHG PL+ E Q+ L R LL HA LVTPN +EA ++GR + PSSM+ AAK I LG R VLIKG HL D Y F F A RI++ H HG+GC SA+ITA L+ G L+AAIET + +I+ AIE P +G G+ PVN
Sbjct: 3 PIALTIAGSDPSGGAGIQADLKTFHQRNVYGMSVLTLLTVQNTRSVDAVEPLAPGFVLAQLDSVLEDIPPHAAKTGALGTREIIEAIARRAAHFSFP-LVVDPVMISKHGAPLLPEEAQKTLVRELLPHATLVTPNLYEASVLSGRQIKDPSSMESAAKDIAQLGPRAVLIKGGHLSGEATDLLYADGLFHLFSAPRIETAHTHGTGCTYSAAITAELAKGVGLVAAIETAKRYITRAIETNPGLGRGVGPVN 254
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A7K0A465_9ACTN (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0A465_9ACTN) HSP 1 Score: 231 bits (590), Expect = 2.240e-72 Identity = 133/263 (50.57%), Postives = 167/263 (63.50%), Query Frame = 1
Query: 4 PLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHL--DRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHALWDS 786
P A+TIAGSDSG GAG QADLKTF A HG S +T +TAQNT GV +H +P V AQ +AV +D+ AAK G L S +I V ++ + I LVVDPV V G L+ + L LL AL+VTPN EA +TGR +DS +MKDAA I DLG R VL+KG HL +R V D F+DGT E A R D+ HG+GCV+SA+I ARL+HGD L+ A++T +EF++ AIER +IG+G PVNP W S
Sbjct: 12 PRALTIAGSDSGGGAGIQADLKTFMALGCHGMSAVTALTAQNTRGVTAIHDVPPDFVEAQIDAVVTDIGVDAAKTGMLSSGEIIEGVARAVERHGISNLVVDPVSVATSGAQLLRDDAVAALMERLLPRALIVTPNLQEAALLTGRAIDSTDAMKDAATEIRDLGPRTVLVKGGHLHEERAV-DVFFDGTTHHEIAAPRFDTEDTHGTGCVLSAAIAARLAHGDRLIDAVQTAKEFVTGAIERGLKIGSGYGPVNP---AWGS 270
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Match: A0A7V9N290_9CHLR (Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9N290_9CHLR) HSP 1 Score: 230 bits (587), Expect = 7.920e-72 Identity = 128/259 (49.42%), Postives = 174/259 (67.18%), Query Frame = 1
Query: 1 PPLAMTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPVAVVRAQYEAVYSDLTPAAAKLGALGSEAMIGCVIELLQDYPIDALVVDPVMVTKHGEPLMSEATQRFLARNLLEHALLVTPNRHEAEAITGRGVDSPSSMKDAAKHIFDLGARNVLIKGSHLDRIVRDYFYDGTGFVEFGADRIDSRHVHGSGCVMSASITARLSHGDSLLAAIETTREFISNAIERAPRIGNGIAPVNPFHAL 777
P AMTIAGSDSGAGAG QADLKTFAA V+GTSV+T +TAQNT GV V +P V+ Q ++V+ D+ A K G L + +++ V L+ + + ALVVDPVMV K GEPL+ + L ++LL AL+VTPN EAE ++G +DSP + +DAA+ I +LG R V++KG HL D YDG F F A+RID+++ HG+GC SA+ITA L+ G + LAAIE + +++ AI + IG+G +PVN FHA+
Sbjct: 10 PVKAMTIAGSDSGAGAGIQADLKTFAALDVYGTSVVTAVTAQNTRGVFAVAEVPEEVIAIQIDSVFEDIGADAVKTGMLSAASIVEIVASRLEAWGVAALVVDPVMVAKGGEPLLQQNAVAALKQHLLPLALVVTPNIPEAEVLSGIAIDSPRAARDAARAIAELGPRYVVVKGGHLAGNATDIVYDGQTFTAFSAERIDTQNTHGTGCTFSAAITAHLACGLAPLAAIEAAKVWLTGAIRESYAIGDGHSPVNHFHAI 268 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99603.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig99603.1.1 >prot_L-digitata_M_contig99603.1.1 ID=prot_L-digitata_M_contig99603.1.1|Name=mRNA_L-digitata_M_contig99603.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=259bp MTIAGSDSGAGAGAQADLKTFAAHRVHGTSVLTLITAQNTVGVDLVHMLPback to top mRNA from alignment at L-digitata_M_contig99603:17..805+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig99603.1.1 ID=mRNA_L-digitata_M_contig99603.1.1|Name=mRNA_L-digitata_M_contig99603.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=789bp|location=Sequence derived from alignment at L-digitata_M_contig99603:17..805+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig99603:17..805+ >mRNA_L-digitata_M_contig99603.1.1 ID=mRNA_L-digitata_M_contig99603.1.1|Name=mRNA_L-digitata_M_contig99603.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=777bp|location=Sequence derived from alignment at L-digitata_M_contig99603:17..805+ (Laminaria digitata LdigPH10_18mv male)back to top |