mRNA_L-digitata_M_contig99264.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: A0A2E7I2S3_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I2S3_9PROT) HSP 1 Score: 82.8 bits (203), Expect = 7.550e-20 Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 1 ELEQAGRARADGDAPSERPCMMCGNKFESEGWHNRLCGSCRKRSAPLG 144
E E GRARA GD +ER CM+CGNKFESEGWHNRLCGSCRKRS G
Sbjct: 21 ETEAYGRARAQGDEATERSCMVCGNKFESEGWHNRLCGSCRKRSVAAG 68
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: A0A2E7PMQ9_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PMQ9_9PROT) HSP 1 Score: 82.8 bits (203), Expect = 7.750e-20 Identity = 36/48 (75.00%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 1 ELEQAGRARADGDAPSERPCMMCGNKFESEGWHNRLCGSCRKRSAPLG 144
E E GR RA GD +ER CMMCGNKFESEGWHNRLCGSCRKRS G
Sbjct: 22 ETEAYGRVRAQGDEATERSCMMCGNKFESEGWHNRLCGSCRKRSVAAG 69
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: A0A2S6Q5S5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q5S5_9PROT) HSP 1 Score: 62.4 bits (150), Expect = 7.360e-12 Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 1
Query: 25 RADGDAPSERPCMMCGNKFESEGWHNRLCGSCRKRSAP 138
RA D P++R CM CG KF SEGWHNRLC CRKRS P
Sbjct: 19 RAVSDVPTDRNCMSCGEKFASEGWHNRLCLRCRKRSEP 56
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: A0A2E6RR90_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E6RR90_9PROT) HSP 1 Score: 58.5 bits (140), Expect = 2.470e-10 Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 1
Query: 25 RADGDAPSERPCMMCGNKFESEGWHNRLCGSCRKRSAP 138
RA+ D PS+R CM C FES+GWHNRLC +CR S+P
Sbjct: 20 RAETDRPSKRKCMSCHKPFESQGWHNRLCNTCRSLSSP 57
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: A0A2E0GIY8_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E0GIY8_9PROT) HSP 1 Score: 57.8 bits (138), Expect = 4.980e-10 Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 25 RADGDAPSERPCMMCGNKFESEGWHNRLCGSCRKRSAP 138
RA D P++R CM C FES+GWHNRLC SCR S+P
Sbjct: 20 RAPTDRPTKRKCMSCAKTFESQGWHNRLCNSCRTLSSP 57
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: W6KFA8_MAGSQ (Uncharacterized protein n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6KFA8_MAGSQ) HSP 1 Score: 56.6 bits (135), Expect = 1.690e-9 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1
Query: 19 RARADGDAPSERPCMMCGNKFESEGWHNRLCGSCRKRS 132
R R+ D P++R C+ CG +FESEGW NRLC CRKR+
Sbjct: 29 RERSRADQPTKRQCLSCGKEFESEGWGNRLCSRCRKRT 66
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: UPI00083886F6 (hypothetical protein n=1 Tax=Paenirhodobacter sp. MME-103 TaxID=1662865 RepID=UPI00083886F6) HSP 1 Score: 49.7 bits (117), Expect = 2.340e-6 Identity = 20/31 (64.52%), Postives = 22/31 (70.97%), Query Frame = 1
Query: 52 RPCMMCGNKFESEGWHNRLCGSCRKRSAPLG 144
R CM CG +FESEG HNRLCG CR + LG
Sbjct: 63 RACMCCGQEFESEGIHNRLCGYCRHKGDALG 93
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: UPI00187FE092 (hypothetical protein n=1 Tax=Marivivens aquimaris TaxID=2774876 RepID=UPI00187FE092) HSP 1 Score: 46.2 bits (108), Expect = 3.450e-5 Identity = 17/32 (53.12%), Postives = 23/32 (71.88%), Query Frame = 1
Query: 46 SERPCMMCGNKFESEGWHNRLCGSCRKRSAPL 141
SER C+ C +F+SEG HNR+C CR +SA +
Sbjct: 49 SERACLCCNERFQSEGSHNRMCDKCRVKSAGM 80
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: K2J1P0_9PROT (Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 TaxID=1207063 RepID=K2J1P0_9PROT) HSP 1 Score: 47.4 bits (111), Expect = 3.990e-5 Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 1
Query: 19 RARADGDAPSERPCMMCGNKFESEGWHNRLCGSCR 123
R RA A +R C+ CGN F+S+G HNR+CGSC+
Sbjct: 103 RHRAARKAKQQRICLCCGNPFDSDGKHNRVCGSCK 137
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Match: A0A2T4JP22_9RHOB (Uncharacterized protein n=4 Tax=Cereibacter changlensis TaxID=402884 RepID=A0A2T4JP22_9RHOB) HSP 1 Score: 46.2 bits (108), Expect = 4.510e-5 Identity = 15/28 (53.57%), Postives = 23/28 (82.14%), Query Frame = 1
Query: 43 PSERPCMMCGNKFESEGWHNRLCGSCRK 126
P R C+ CG++F+SEG+H+R+CG CR+
Sbjct: 51 PRMRSCLCCGDEFQSEGYHHRMCGPCRR 78 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99264.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig99264.2.1 >prot_L-digitata_M_contig99264.2.1 ID=prot_L-digitata_M_contig99264.2.1|Name=mRNA_L-digitata_M_contig99264.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=49bp ELEQAGRARADGDAPSERPCMMCGNKFESEGWHNRLCGSCRKRSAPLG*back to top mRNA from alignment at L-digitata_M_contig99264:382..528- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig99264.2.1 ID=mRNA_L-digitata_M_contig99264.2.1|Name=mRNA_L-digitata_M_contig99264.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=147bp|location=Sequence derived from alignment at L-digitata_M_contig99264:382..528- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig99264:382..528- >mRNA_L-digitata_M_contig99264.2.1 ID=mRNA_L-digitata_M_contig99264.2.1|Name=mRNA_L-digitata_M_contig99264.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=147bp|location=Sequence derived from alignment at L-digitata_M_contig99264:382..528- (Laminaria digitata LdigPH10_18mv male)back to top |