mRNA_L-digitata_M_contig9925.1.2 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig9925.1.2
Unique NamemRNA_L-digitata_M_contig9925.1.2
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: D8LRK7_ECTSI (YqgFc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK7_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 5.280e-94
Identity = 172/260 (66.15%), Postives = 192/260 (73.85%), Query Frame = 1
Query:  340 VHPSVAWLYP---SSATPXXXXXXXXXXXRKK-LRRTLCVDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGGGISRKVEIDSLAASVILDDYFAGGGRDGAERVEP--GEATAATLFAAGRDGQGGRGXXXXXXXXXXXDMYGEGSRQRLDEMRAESARSAAAGDDFVPTMRAPKRRRK 1101
            VHPSV+WLYP   SS T            + +  RRTLCVDYGTRRVGLAIG+GISPR VPGVTN G++LEV RQVL+RARGEGIRDIVVGLPLER     NGTE EMC+ VRGFAS+LAD GAASRP+A VFLWDERFSSAQA AMLDPYGGG+S KVEIDSLAAS+IL  +F  GG + AE+V+P  G  TA    AAGRDG+   G     XXXXX D YGEGSR+R  EMR ESARSAAAG+D        KRRR+
Sbjct:   44 VHPSVSWLYPPKPSSTTAVKTTDTRSQETKTRPSRRTLCVDYGTRRVGLAIGVGISPRAVPGVTNVGSDLEVARQVLVRARGEGIRDIVVGLPLER-----NGTETEMCEIVRGFASVLADVGAASRPTAGVFLWDERFSSAQAAAMLDPYGGGMSSKVEIDSLAASLILKHFFEEGGTNNAEKVKPSTGVVTAEVWRAAGRDGE--EGEEDESXXXXXEDAYGEGSRRRFQEMREESARSAAAGEDSARRRAWRKRRRR 296          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.520e-19
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  436 TLCVDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGGGISRKVEIDSLAASVILDDYFA 852
            TL VDYG RRVG+ +G+G + R +  + +  +   VV ++L  AR E I  IVVGLPLE+     +G E   C   R FA    DA AA+ P+  + LWDERFSS +AEA+L    G       +D++AA VILDD+FA
Sbjct:   78 TLGVDYGLRRVGVCVGVGFASRPLEVIEHDEDIDAVVARLLQIARRERIASIVVGLPLEK-----DGAEGLQCAATRRFA----DALAAAAPATPLVLWDERFSSREAEALLAHRPGAA-----LDAVAACVILDDFFA 202          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A7S2ZDD4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDD4_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 4.620e-19
Identity = 66/157 (42.04%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  430 RRTLCVDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAML---DPYGGGISRKVEIDSLAASVILDDYFAGGGRDGAERVEPG 891
            ++TL VDYG RRVGLA+ +GI+PR +  + NRGN  EV R++   AR E +  +VVGLPL      S G E E     R F   L  A     P   ++LWDERFS+  A   L     Y   +   V  DS AA  IL+D+F   G D AE + PG
Sbjct:   22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLN-----SKGDEGEQAAATRKFCEYLRIA----LPEPPIYLWDERFSTQTARNRLMSSKTYRNQVENFV--DSEAAVAILEDFFENSGDD-AELLYPG 166          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU)

HSP 1 Score: 94.4 bits (233), Expect = 5.980e-19
Identity = 60/142 (42.25%), Postives = 84/142 (59.15%), Query Frame = 1
Query:  433 RTLCVDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRA-RGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGGGISRKVEIDSLAASVILDDYFAG 855
            RTL VD+G RR GLA+  GI+P  +  + ++   L  V   ++RA R EG   +V+G+P     Y S+G E E     R F  +LA   AA RP   V+LWDERFSSA+A +M    G G +R   ID +AA++IL+++F G
Sbjct:   62 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMP-----YNSSGGEGEQAVATRRFGELLARE-AAPRP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFEG 193          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: R1ED05_EMIHU (YqgFc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED05_EMIHU)

HSP 1 Score: 94.4 bits (233), Expect = 6.950e-19
Identity = 60/142 (42.25%), Postives = 84/142 (59.15%), Query Frame = 1
Query:  433 RTLCVDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRA-RGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGGGISRKVEIDSLAASVILDDYFAG 855
            RTL VD+G RR GLA+  GI+P  +  + ++   L  V   ++RA R EG   +V+G+P     Y S+G E E     R F  +LA   AA RP   V+LWDERFSSA+A +M    G G +R   ID +AA++IL+++F G
Sbjct:   26 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMP-----YNSSGGEGEQAVATRRFGELLARE-AAPRP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFEG 157          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A7S4D691_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D691_HETAK)

HSP 1 Score: 92.8 bits (229), Expect = 6.780e-18
Identity = 62/153 (40.52%), Postives = 89/153 (58.17%), Query Frame = 1
Query:  433 RTLCVDYGTRRVGLAIGIG-ISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGGGISRKVEIDSLAASVILDDYFAGGGRDGAERVEP 888
            R L VDYGT+RVG+AI  G I+PR V  + N G++ +V+R++   AR E I   VVG+PL+R     +G E       R F+  LAD  +   P   V++W+E FSS  AE++L     G      +D++AA +IL+DYF+  G  GAE + P
Sbjct:   74 RVLGVDYGTKRVGIAISAGGIAPRPVKIIQNSGDDSQVIREIKFMARAEQISSFVVGVPLQR-----DGAETNQSIINRNFSQTLADEVS---PRVPVYVWNEAFSSVAAESLLLHKSRG-EIDACLDAVAACMILEDYFSEDGW-GAELIPP 216          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A0M9UCW6_9CHLR (Putative pre-16S rRNA nuclease n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0M9UCW6_9CHLR)

HSP 1 Score: 83.6 bits (205), Expect = 8.910e-16
Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  445 VDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGGGI-SRKVEIDSLAASVILDDYFAGGGRDGAERVEP 888
            +DYG RRVG+A G+G++PR V  V   G+   ++ +++  AR E    I+VGLPL      ++G+E E     R FA +LA     ++    V+LWDER++S  A+  +   G    +R+ ++D++AA+V+L+ YF   G  GAERV P
Sbjct:    1 MDYGKRRVGVAAGVGMAPRPV-AVLPHGSLESLIARLVELARAEQAAKIIVGLPLN-----TDGSEGEQAAQCRAFAEVLA-----AQTDIPVYLWDERYTSKDAQQQMIAAGTTQKARREKLDAVAAAVMLEHYFEHQGV-GAERVIP 137          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A7S3E813_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E813_9RHOD)

HSP 1 Score: 82.8 bits (203), Expect = 2.910e-15
Identity = 50/114 (43.86%), Postives = 64/114 (56.14%), Query Frame = 1
Query:  430 RRTLCVDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAML 771
            ++TL VDYG RRVGLA+ +GI+PR +  + NRGN  EV R++   AR E +  +VVGLPL      S G E E     R F   L  A     P   ++LWDERFS+  A   L
Sbjct:   22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLN-----SKGDEGEQAAATRKFCEYLRIA----LPEPPIYLWDERFSTQTARNRL 126          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A7S2WGV2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGV2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 5.930e-13
Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = 1
Query:  430 RRTLCVDYGTRRVGLAIGIGISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGGGISRKVE------IDSLAASVILDDYFAGGGRDGAERVEP 888
            R  L VDYGTRR+GLA+  G SPR V  + + GN  E+V ++L  A+GE    +VVG PL +     +G E       R F  +LA   A       V++ DER+SSA+AEA L      +S+K +      +D+ +A  IL  +F        ER+ P
Sbjct:   57 RLALGVDYGTRRIGLAMSAGFSPRPVLTIKHTGNTTEMVHKILNIAKGEDAELLVVGNPLNQ-----DGEENFQSDLTRNFTQVLASEVARRSLKLGVYMKDERYSSAEAEANLQ----FVSKKSKGRMLAVLDAESACSILRAFFNEPVDSSVERITP 206          
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Match: A0A7S0L5P9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5P9_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 7.160e-13
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  433 RTLCVDYGTRRVGLAIGIGISPRV-----VPGVTNR--GNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTSNGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPYGG-GISRKVEIDSLAASVILDDYFAG 855
            R+L VD GT R G+A+  G +P       VP       G+  ++V+ V   A+ EG+  IVVG+P     Y   G E +  Q  R FA MLA+   A  P   VFLWDERFS+A+A+  +  +GG G +    +D++AA+VIL+ +++G
Sbjct:   16 RSLGVDLGTVRTGIAVSSGYAPLPLTVLRVPRAAEEPVGDVSQLVQLVCNAAQREGVDQIVVGMP-----YNHTGGEGKQAQYTRQFAQMLANV--ARLP---VFLWDERFSTAEAQHRM--HGGFGAASGEAVDAVAAAVILEAFYSG 152          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9925.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRK7_ECTSI5.280e-9466.15YqgFc domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A8J2T1I1_9STRA2.520e-1944.60Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2ZDD4_9RHOD4.620e-1942.04Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3X7E5_EMIHU5.980e-1942.25Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
R1ED05_EMIHU6.950e-1942.25YqgFc domain-containing protein n=2 Tax=Emiliania ... [more]
A0A7S4D691_HETAK6.780e-1840.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0M9UCW6_9CHLR8.910e-1637.58Putative pre-16S rRNA nuclease n=2 Tax=Ardenticate... [more]
A0A7S3E813_9RHOD2.910e-1543.86Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2WGV2_9STRA5.930e-1336.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0L5P9_9EUKA7.160e-1338.26Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9925contigL-digitata_M_contig9925:405..2217 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRK7
PFAMsRuvX
Model size1110
Max annot lvl2759|Eukaryota
KEGG koko:K07447
Hectar predicted targeting categorysignal peptide
Exons2
Evalue6.15e-95
EggNOG OGs2E4SD@1|root,2SBMG@2759|Eukaryota
Ec32 ortholog descriptionYqgF/RNase H-like domain
Ec32 orthologEc-12_000160.1
DescriptionHolliday junction resolvase
Cds size1080
COG categoryS
BRITEko00000,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408650.3205156-UTR-L-digitata_M_contig9925:404..4341682408650.3205156-UTR-L-digitata_M_contig9925:404..434Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig9925 405..434 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408650.3395405-CDS-L-digitata_M_contig9925:434..10331682408650.3395405-CDS-L-digitata_M_contig9925:434..1033Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig9925 435..1033 +
1682408650.3578684-CDS-L-digitata_M_contig9925:1736..22171682408650.3578684-CDS-L-digitata_M_contig9925:1736..2217Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig9925 1737..2217 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9925.1.2prot_L-digitata_M_contig9925.1.2Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig9925 435..2217 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig9925.1.2

>prot_L-digitata_M_contig9925.1.2 ID=prot_L-digitata_M_contig9925.1.2|Name=mRNA_L-digitata_M_contig9925.1.2|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=360bp
MAEARARRPRRPRQSLAATVAVCFCSLSVLAPPYLPGHAYVIPAAATRAR
LLRRLVATTATYRRCNATPAEQAEEMMPFSSGDTDGDSDQQAEYDDNDDN
EDDVHPSVAWLYPSSATPPPSGGSSSTASRKKLRRTLCVDYGTRRVGLAI
GIGISPRVVPGVTNRGNELEVVRQVLIRARGEGIRDIVVGLPLERQVYTS
NGTEAEMCQTVRGFASMLADAGAASRPSASVFLWDERFSSAQAEAMLDPY
GGGISRKVEIDSLAASVILDDYFAGGGRDGAERVEPGEATAATLFAAGRD
GQGGRGGGEEEQQEEEEDMYGEGSRQRLDEMRAESARSAAAGDDFVPTMR
APKRRRKRR*
back to top

mRNA from alignment at L-digitata_M_contig9925:405..2217+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig9925.1.2 ID=mRNA_L-digitata_M_contig9925.1.2|Name=mRNA_L-digitata_M_contig9925.1.2|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=1813bp|location=Sequence derived from alignment at L-digitata_M_contig9925:405..2217+ (Laminaria digitata LdigPH10_18mv male)
CGAAACCAGCGCACGCCACCACAGAGTATCATGGCGGAAGCACGAGCAAG ACGGCCGCGAAGGCCGAGACAATCATTGGCAGCAACTGTCGCGGTGTGTT TCTGCTCGTTGTCTGTTCTGGCTCCGCCGTATCTACCGGGACATGCTTAC GTGATCCCGGCAGCAGCAACCAGAGCGCGGCTTCTGCGCCGCCTAGTCGC AACAACTGCAACCTACAGGCGATGCAACGCTACACCAGCAGAGCAGGCTG AGGAGATGATGCCGTTCAGCAGCGGCGATACTGATGGCGACAGCGATCAG CAGGCCGAGTACGATGATAACGATGACAATGAGGATGACGTACACCCGTC GGTCGCGTGGCTCTACCCGTCGTCCGCGACTCCCCCTCCTTCGGGCGGGA GCAGCAGCACCGCCAGTAGGAAGAAGTTGAGGCGGACGCTCTGTGTGGAC TATGGCACCCGTCGTGTGGGACTGGCCATAGGTATAGGAATCTCGCCGCG CGTTGTGCCGGGCGTCACCAACCGCGGCAACGAGCTGGAGGTCGTGCGCC AGGTGCTTATTCGAGCTCGCGGGGAGGGGATACGCGACATCGTGGTGGGA TTGCCGCTTGAGAGGCAAGTATATACTTCGTACCAGTATTCGTTTGACGC ATGAGATAACGAGACAAGAGACACAGACACGACTCATACATACCTTCACA CTCATTCGTAATAGTCAAGCGATGAGCCAGGTAACTGATGAGCTGGTGAG TACGTGCCTGGTACAGCTTGTAGCCAGTACGCAGGGACTTATCTACAGGT ATTTCATAGCACTTATCGTATCAGGAGAAAACTTCCAGACACAGGCAGAG GGCAGCATCAGCTGGCTATCGCATCAGTGCAGGGGGTGCTGGCGGTCTGC ACCGCTGGAGGCCAGCTCAAGCTCGAAAGCCACGACATGGCTCTCGGAAT GCTCCAACATCGCACCTCAGCACTCAGTACACTCTTGTGCGGCACTAAAT ACGGCTGACTACAAGTACTGCCTGTGTAATTTACAGCTTTTCTTCCACAC ACTTGTCACGGTCGCTCGCCCCAACGCACAGCAGTTCCATTATATTTTGG AGACAGCGACTCCCCCAATTCCTCGTTCTGGTGCGGCCACTACATGCGAG GCCTGCTCTTTACGCTCCGCGCTGCGTATGCTATCCTGCGTACGGCATCA TCATGTCAAATAGGGCATCTATTCTATGGGTGCGATATCATATTATACGA TCGTACTCGTACACGATTTTATTTTCCTTCCCCTTACCCAGTCGGCATCG CTCTCTCGCTCTGCGCGTGCGTGCGTGCGCAGAAACGGGACGGAGGCCGA GATGTGTCAAACCGTGCGCGGCTTCGCGTCCATGCTGGCCGATGCGGGCG CCGCGTCTCGCCCCTCCGCGAGCGTCTTCCTCTGGGACGAGCGATTCTCC TCGGCGCAAGCGGAGGCCATGCTGGACCCATACGGGGGTGGGATTAGCCG CAAGGTCGAGATAGACTCTCTCGCGGCCAGCGTCATCCTCGACGACTATT TCGCCGGGGGAGGAAGGGACGGCGCGGAGAGGGTCGAACCCGGCGAAGCC ACGGCGGCTACTCTGTTCGCCGCCGGGAGAGACGGGCAAGGGGGGCGGGG GGGGGGGGAGGAAGAGCAGCAGGAAGAGGAGGAGGACATGTACGGGGAGG GGTCGAGGCAAAGGCTAGACGAGATGCGAGCCGAGTCGGCTAGGAGCGCG GCCGCGGGAGACGACTTTGTTCCCACGATGCGCGCGCCGAAACGAAGGCG CAAGCGACGCTAG
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig9925:405..2217+

>mRNA_L-digitata_M_contig9925.1.2 ID=mRNA_L-digitata_M_contig9925.1.2|Name=mRNA_L-digitata_M_contig9925.1.2|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1080bp|location=Sequence derived from alignment at L-digitata_M_contig9925:405..2217+ (Laminaria digitata LdigPH10_18mv male)
ATGGCGGAAGCACGAGCAAGACGGCCGCGAAGGCCGAGACAATCATTGGC
AGCAACTGTCGCGGTGTGTTTCTGCTCGTTGTCTGTTCTGGCTCCGCCGT
ATCTACCGGGACATGCTTACGTGATCCCGGCAGCAGCAACCAGAGCGCGG
CTTCTGCGCCGCCTAGTCGCAACAACTGCAACCTACAGGCGATGCAACGC
TACACCAGCAGAGCAGGCTGAGGAGATGATGCCGTTCAGCAGCGGCGATA
CTGATGGCGACAGCGATCAGCAGGCCGAGTACGATGATAACGATGACAAT
GAGGATGACGTACACCCGTCGGTCGCGTGGCTCTACCCGTCGTCCGCGAC
TCCCCCTCCTTCGGGCGGGAGCAGCAGCACCGCCAGTAGGAAGAAGTTGA
GGCGGACGCTCTGTGTGGACTATGGCACCCGTCGTGTGGGACTGGCCATA
GGTATAGGAATCTCGCCGCGCGTTGTGCCGGGCGTCACCAACCGCGGCAA
CGAGCTGGAGGTCGTGCGCCAGGTGCTTATTCGAGCTCGCGGGGAGGGGA
TACGCGACATCGTGGTGGGATTGCCGCTTGAGAGGCAAGTATATACTTCA
AACGGGACGGAGGCCGAGATGTGTCAAACCGTGCGCGGCTTCGCGTCCAT
GCTGGCCGATGCGGGCGCCGCGTCTCGCCCCTCCGCGAGCGTCTTCCTCT
GGGACGAGCGATTCTCCTCGGCGCAAGCGGAGGCCATGCTGGACCCATAC
GGGGGTGGGATTAGCCGCAAGGTCGAGATAGACTCTCTCGCGGCCAGCGT
CATCCTCGACGACTATTTCGCCGGGGGAGGAAGGGACGGCGCGGAGAGGG
TCGAACCCGGCGAAGCCACGGCGGCTACTCTGTTCGCCGCCGGGAGAGAC
GGGCAAGGGGGGCGGGGGGGGGGGGAGGAAGAGCAGCAGGAAGAGGAGGA
GGACATGTACGGGGAGGGGTCGAGGCAAAGGCTAGACGAGATGCGAGCCG
AGTCGGCTAGGAGCGCGGCCGCGGGAGACGACTTTGTTCCCACGATGCGC
GCGCCGAAACGAAGGCGCAAGCGACGCTAG
back to top