mRNA_L-digitata_M_contig99217.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A6H5JB93_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB93_9PHAE) HSP 1 Score: 176 bits (445), Expect = 3.140e-51 Identity = 81/86 (94.19%), Postives = 82/86 (95.35%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCK H VHYHEASMW+GTKEVLSHL VSAEFIAEFPAM
Sbjct: 394 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKQHDVHYHEASMWEGTKEVLSHLSDVSAEFIAEFPAM 479
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A812UH41_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UH41_SYMMI) HSP 1 Score: 147 bits (370), Expect = 1.350e-41 Identity = 66/86 (76.74%), Postives = 71/86 (82.56%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QV+TTRN+TST FVDWFCGGLQYQVDHHLFP +PRHNL+K H LVESFCK GV YHE MW GTKEVL HL VS EF+ EFPAM
Sbjct: 230 QVSTTRNITSTWFVDWFCGGLQYQVDHHLFPSLPRHNLKKAHELVESFCKSEGVTYHETDMWVGTKEVLMHLSKVSREFVTEFPAM 315
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A6V1P576_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V1P576_HETAK) HSP 1 Score: 143 bits (360), Expect = 7.880e-39 Identity = 65/86 (75.58%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QVTTTRN+TS FVDWFCGGLQYQVDHHLFP IPRHNL+K H LV FCK H V YHE +MW GTKEVLS L +VS EF EFPAM
Sbjct: 385 QVTTTRNITSNWFVDWFCGGLQYQVDHHLFPMIPRHNLKKTHQLVTGFCKEHSVTYHETNMWVGTKEVLSFLNNVSTEFFTEFPAM 470
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A1S7C7Q7_9STRA (Delta-6 fatty acid desaturase n=2 Tax=Nannochloropsis TaxID=5748 RepID=A0A1S7C7Q7_9STRA) HSP 1 Score: 140 bits (354), Expect = 6.210e-38 Identity = 63/86 (73.26%), Postives = 71/86 (82.56%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QVTTTRNVT + V WFCGGL YQVDHHLFP IPRH L K+H LVE FCK HGV YHE +MW+GTKEVL+HL SV+ EF+A+FPAM
Sbjct: 389 QVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 474
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A835YIW8_9STRA (Delta-6 fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIW8_9STRA) HSP 1 Score: 137 bits (346), Expect = 8.730e-37 Identity = 65/86 (75.58%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QVTTTRNV+ FVDWFCGGLQYQVDHHLFP IPRHNL KVH V +FCK +GV YHEASM GT EVLSHL VS +FI EFPAM
Sbjct: 387 QVTTTRNVSPNLFVDWFCGGLQYQVDHHLFPSIPRHNLPKVHAAVAAFCKENGVEYHEASMLAGTVEVLSHLKGVSTQFIGEFPAM 472
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A4D9CU91_9STRA (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU91_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.470e-36 Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QVTTTRNVT + WFCGGL YQVDHHLFP IPRH L ++H LVESFCK HGV YHE SMW+GT EVL+HL SV+ EF+ +FPAM
Sbjct: 390 QVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTLEVLAHLASVTKEFVTDFPAM 475
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A835YVN5_9STRA (Delta-6 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN5_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.200e-36 Identity = 64/86 (74.42%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QVTTTRNV+ FVDWFCGGLQYQVDHHLFP IPRHNL+KVH LV +FC+ +GV YHEASM GT EVL HL VS FI EFPAM
Sbjct: 384 QVTTTRNVSPNLFVDWFCGGLQYQVDHHLFPSIPRHNLKKVHALVAAFCRENGVAYHEASMLAGTGEVLGHLKEVSEAFIHEFPAM 469
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A7S2STG5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STG5_9STRA) HSP 1 Score: 133 bits (335), Expect = 4.750e-35 Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEFPAM 258
QVTTTRN+T FV W CGGL+YQVDHHLFP +PRH+L K H L+ SFCK HG+ Y+EAS W+GT +VL+HL SV+ EF+AEFPAM
Sbjct: 415 QVTTTRNITGNAFVHWLCGGLEYQVDHHLFPMMPRHSLPKAHELIVSFCKEHGIKYNEASYWKGTWDVLNHLDSVAHEFVAEFPAM 500
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A7S1Y960_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y960_9STRA) HSP 1 Score: 123 bits (309), Expect = 7.200e-35 Identity = 60/88 (68.18%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 1 QVTTTRNVTS-----TPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAEF 249
QVTTTRNVT FVDWFCGGLQYQVDHHLFP +PRH+L+K H LV SFCK GV YHEA M GT EVL HL SVS EF+ +F
Sbjct: 11 QVTTTRNVTGGHGIPQAFVDWFCGGLQYQVDHHLFPTLPRHSLKKAHALVASFCKEWGVKYHEADMVDGTMEVLQHLKSVSDEFVIDF 98
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Match: A0A7S2XQ84_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQ84_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.110e-33 Identity = 62/95 (65.26%), Postives = 69/95 (72.63%), Query Frame = 1
Query: 1 QVTTTRNVTS-----TPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKHHGVHYHEASMWQGTKEVLSHLGSVSAEFIAE----FPAM 258
QVTTTRN+T FVDWFCGGLQYQVDHHLFP +PRHNL+K H L+ESFCK V YHEA +W+GT EVL HL VS +FI E FPAM
Sbjct: 392 QVTTTRNITGGHGIPQAFVDWFCGGLQYQVDHHLFPMMPRHNLKKTHVLIESFCKEWDVQYHEADLWEGTLEVLQHLSKVSDDFIVEMIQEFPAM 486 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99217.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig99217.1.1 >prot_L-digitata_M_contig99217.1.1 ID=prot_L-digitata_M_contig99217.1.1|Name=mRNA_L-digitata_M_contig99217.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=87bp QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKback to top mRNA from alignment at L-digitata_M_contig99217:205..465- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig99217.1.1 ID=mRNA_L-digitata_M_contig99217.1.1|Name=mRNA_L-digitata_M_contig99217.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=261bp|location=Sequence derived from alignment at L-digitata_M_contig99217:205..465- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig99217:205..465- >mRNA_L-digitata_M_contig99217.1.1 ID=mRNA_L-digitata_M_contig99217.1.1|Name=mRNA_L-digitata_M_contig99217.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=261bp|location=Sequence derived from alignment at L-digitata_M_contig99217:205..465- (Laminaria digitata LdigPH10_18mv male)back to top |