mRNA_L-digitata_M_contig98543.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig98543.1.1
Unique NamemRNA_L-digitata_M_contig98543.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: A0A7H0VDU5_9FLAO (YpdA family putative bacillithiol disulfide reductase n=1 Tax=Croceimicrobium hydrocarbonivorans TaxID=2761580 RepID=A0A7H0VDU5_9FLAO)

HSP 1 Score: 413 bits (1062), Expect = 4.220e-143
Identity = 200/272 (73.53%), Postives = 232/272 (85.29%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQKRVE 816
            STADKLEIGG+PFI+QN+KP R+EALEYYR+VCM H+L + L ERL+ V  SEAGF + TDK  Y  +YL LATGFYDLVNPLNIPGEEL KVAHYYKDPHPYF  RVAVVGAANSAVDAALELYRKGAKEVSMIIRE EISPRVKYWVRPD++NRIEEGSIKAYF++EL  I +  ++F+  G  K I NDAVLALTGYRPDF  L+NIGL+FS E S KP+Y+ +TMESS+  LFLAGVICGGLETNKWFIENSR+HA+ I+ E+++R++
Sbjct:   50 STADKLEIGGIPFISQNSKPTRSEALEYYRRVCMKHQLHIHLQERLIDVQSSEAGFSITTDKDAYQSQYLILATGFYDLVNPLNIPGEELPKVAHYYKDPHPYFGLRVAVVGAANSAVDAALELYRKGAKEVSMIIRESEISPRVKYWVRPDVINRIEEGSIKAYFEAELSAIHDDHIVFEHQGQSKEIANDAVLALTGYRPDFKMLENIGLEFSEEASHKPLYDEDTMESSVSNLFLAGVICGGLETNKWFIENSRVHADKIIGELKRRMK 321          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: A0A2T4WJ76_9BACT (YpdA family putative bacillithiol disulfide reductase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WJ76_9BACT)

HSP 1 Score: 332 bits (852), Expect = 3.230e-111
Identity = 161/271 (59.41%), Postives = 207/271 (76.38%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQKRV 813
            STADK+EIG VPFI+QN KPNR+EALEYYR+V M+  L + L E +  + K    F L++ +  Y  K + +ATGFYD  N +NIPGE L KV HYY+D HP+F++ VAV+GAANSAVDAALEL+RKGA+ VS+IIRE EIS RVKYWVRPD++NRI+EGSIKAYF+SE   I+ + +  +Q G   ++ ND VLALTGY+PD+  L  +GL FS +  ++PIYN ETMES+I GL+LAGVICGG++TNKWFIENSR HA +I+  I  ++
Sbjct:   50 STADKIEIGKVPFISQNVKPNRSEALEYYRRVAMVFNLNIHLQEEVFRIIKLSDHFTLESKREAYNAKRIVIATGFYDHANAMNIPGENLPKVQHYYQDAHPFFKRHVAVIGAANSAVDAALELFRKGAESVSIIIRESEISERVKYWVRPDIINRIKEGSIKAYFESECTRIEAEYLYIQQAGQELKLKNDNVLALTGYKPDYKLLIELGLQFSDDAIKQPIYNSETMESNIAGLYLAGVICGGMQTNKWFIENSRGHAGMIIKHILTQI 320          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: A0A4Q9FIC7_9FLAO (YpdA family putative bacillithiol disulfide reductase n=1 Tax=Hyunsoonleella flava TaxID=2527939 RepID=A0A4Q9FIC7_9FLAO)

HSP 1 Score: 328 bits (842), Expect = 1.100e-109
Identity = 158/268 (58.96%), Postives = 209/268 (77.99%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQ 804
            ST++KLEI  +PFI++N KPNR EALEYYR+V   +++ + L E++ A++K+  GF+++T+K E+  K L LATGFYD+ N L++PGE+L KV HYYK+ HPY  Q + VVGA+NS+VDAALE+YRKG   V+MIIR + I  RVKYWVRPD++NRIEEGSI AYF SE+IEI E EV+F+    +K+IPND V+ALTGY+P+FD L  +G+  S +E R P YN ETME++I G++LAGVICGG+ET+KWFIENSRIHA  I   I+
Sbjct:   50 STSEKLEIDSIPFISKNPKPNRDEALEYYRRVATSNQININLFEQVGAISKNNIGFEIRTNKGEHTTKKLILATGFYDIPNLLDVPGEDLPKVTHYYKEAHPYAMQDIVVVGASNSSVDAALEIYRKGGN-VTMIIRGEGIGERVKYWVRPDIINRIEEGSITAYFNSEIIEITENEVVFESPDGIKKIPNDFVVALTGYKPNFDLLNQLGVSQSDDEKRLPTYNTETMETNIEGVYLAGVICGGMETHKWFIENSRIHAKQIATHIE 316          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: UPI001BB711AA (YpdA family putative bacillithiol disulfide reductase n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=UPI001BB711AA)

HSP 1 Score: 328 bits (840), Expect = 2.610e-109
Identity = 160/274 (58.39%), Postives = 204/274 (74.45%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQ-NGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQKRVES 819
            ST+DKLEIG VPFI+ NTKP R+EALEYYR+V     L +   E +  V K    F + + K+ Y  + + L TGFYD  + L IPGEEL KV HYYKDPHP+F +++ VVGAANSAVD ALE +RKGA EVSMI+RE EISPR KYWVRPD++NRIEEGSI A+F +EL+EIKE  V+F+  NG L+ I ND VLA+TGY P+F  L+++G+  + +E++ PIYN ETME+  PG+F+AGV+CGGLET+KWFIENSR+H   I  E+ +R  S
Sbjct:   53 STSDKLEIGDVPFISHNTKPTRSEALEYYRRVTSAWNLNVLTYEGVERVEKENDLFTVSSKKSAYTARCVVLTTGFYDAPHKLGIPGEELPKVYHYYKDPHPFFGKKIVVVGAANSAVDVALETWRKGAAEVSMIVREPEISPRAKYWVRPDLINRIEEGSIPAHFNAELVEIKEDSVIFRDANGELQEIENDFVLAMTGYEPNFKLLRSLGVGINDDETQAPIYNEETMETDEPGVFVAGVVCGGLETHKWFIENSRVHGKRIAEELARRKSS 326          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: A0A2E1E8Z0_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E1E8Z0_9FLAO)

HSP 1 Score: 327 bits (838), Expect = 4.160e-109
Identity = 155/269 (57.62%), Postives = 205/269 (76.21%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQK 807
            ST+D+LEIG +PFI+ N+KP R EALEYYR+VC   KL ++L E+++++ K E  F++ TDK  Y  K + +ATGFYD+   LN+PGE L KV HYY +PHP++   +A+VG+ANSAVDAALE YRKGAK V+MIIRE+EI   VKYWVRPD++NRI+EGSI A+F SE+IEIK++ ++ K N   K + ND VLA+TGY+P+F  L  IG+ F  ++ R P YN +TMES+I G +LAGV+CGG +TNKWFIENSR HA LI+  I+K
Sbjct:   50 STSDRLEIGEIPFISNNSKPTRLEALEYYRRVCSHWKLNIKLYEKVISITK-EKNFKIITDKTTYKTKNIVIATGFYDIPFLLNVPGENLEKVYHYYSEPHPFYGMNIAIVGSANSAVDAALETYRKGAKSVTMIIRENEIGDNVKYWVRPDIINRIKEGSIPAFFNSEIIEIKKESIIIKTNNKNKELKNDFVLAMTGYQPNFKLLDEIGVSFEKDKYRTPRYNSKTMESNIKGAYLAGVVCGGYKTNKWFIENSREHAPLIIKSIKK 317          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: UPI0015BD1749 (YpdA family putative bacillithiol disulfide reductase n=3 Tax=Winogradskyella TaxID=286104 RepID=UPI0015BD1749)

HSP 1 Score: 327 bits (838), Expect = 4.920e-109
Identity = 163/272 (59.93%), Postives = 206/272 (75.74%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQKRVE 816
            ST++KLEI  +PFI+ N KP R EALEYYR+V   + L + L E++L +NK++ GF++ +DKA Y  K + +ATGFYD+ N LN+PGE L KV HYYK+ HPY  Q +AVVGA+NS+VDAALE+YRKG   V+MI+R + I  RVKYWV+PD+LNRIEEGSIKAYF SE+ EIK  E++ K N     I ND V+ALTGYRP+F FL N G++FS +E   PIYN ETMES++ GL+LAGVICGG+ET+KWFIENSRIHA LI   I+   E
Sbjct:   54 STSEKLEIDEIPFISNNPKPTRNEALEYYRRVSTSNNLNINLYEKVLDINKAKNGFKIASDKAIYYSKKVIIATGFYDIPNLLNVPGEVLPKVFHYYKEAHPYTLQNIAVVGASNSSVDAALEIYRKGGN-VTMIVRGNTIGERVKYWVKPDILNRIEEGSIKAYFNSEIKEIKATEIIVKTNEGDITISNDYVVALTGYRPNFKFLANAGIEFSKDEKHIPIYNPETMESNVEGLYLAGVICGGMETHKWFIENSRIHAKLIANHIENNKE 324          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: A0A3D4C7F8_9FLAO (YpdA family putative bacillithiol disulfide reductase n=2 Tax=unclassified Flavobacteriaceae TaxID=61432 RepID=A0A3D4C7F8_9FLAO)

HSP 1 Score: 327 bits (837), Expect = 7.450e-109
Identity = 161/272 (59.19%), Postives = 202/272 (74.26%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQKRVE 816
            ST+D+LEIGGVPFI+QN KP R+EALEYYR+V   H+L+L L E + A+   E  F +QT KA+Y  K L +ATGFYD    LNIPGE L KV HYY +PHPYF   + +VGAANSAVDAALE +RKGAK V+M+IRE EI   VKYW RPD++NRIEEGSI A+F+SEL EI    V  +     ++I ND VLA+TGY+P+F  L++IG+ F  +E + PIY+  TME++  G+FLAGV+CGGL+TNKWFIENSR HA LI+A I K+ E
Sbjct:   50 STSDRLEIGGVPFISQNPKPTRSEALEYYRRVSHHHQLQLHLYEAVDAIINKEDDFMIQTTKAQYTAKNLVVATGFYDAPYLLNIPGENLPKVRHYYTEPHPYFNMDIVIVGAANSAVDAALETFRKGAKSVTMVIREKEIGQNVKYWARPDIINRIEEGSIAAFFESELKEITANHVTIQSPNGTRQIKNDYVLAMTGYQPNFKLLESIGVSFHQDEFQTPIYDESTMEANASGVFLAGVVCGGLKTNKWFIENSRDHAPLIMAAIAKKKE 321          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: UPI0014925C98 (YpdA family putative bacillithiol disulfide reductase n=1 Tax=Muricauda amphidinii TaxID=2735167 RepID=UPI0014925C98)

HSP 1 Score: 326 bits (836), Expect = 1.130e-108
Identity = 156/272 (57.35%), Postives = 213/272 (78.31%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQKRVE 816
            S+++KLEI  +PFI++  KP R EALEYYR++   ++L + L E+++ V K    F +QTDK +Y  K + +ATGFYDL N +N+PGE+L KV+HYYKDPH Y  Q++AVVGA+NSA+DAALE +RKGA EV++IIR  E+  RVKYWVRPD++NRIEEGSIKAY+ SE+IEIKE E+L +       + ND VLALTGY+P+F+FL+++G+  S ++ R P Y+ ETME++IPGLFLAGVICGG+ET+KWFIENSRIHA +I+  I+ +++
Sbjct:   52 SSSEKLEIDEIPFISKEAKPKRNEALEYYRRIVTSNQLNIHLFEKVIEVQKKINQFHIQTDKNQYMAKNVIVATGFYDLPNTINVPGEDLPKVSHYYKDPHFYANQKLAVVGASNSAIDAALECWRKGA-EVTLIIRGPEVGKRVKYWVRPDIINRIEEGSIKAYYNSEVIEIKENEILLQTPEGEISLANDFVLALTGYKPNFEFLEHLGITLSQDQKRLPTYDPETMETNIPGLFLAGVICGGMETHKWFIENSRIHAPIIIKSIKHKMQ 322          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: A0A850LB11_9BACT (YpdA family putative bacillithiol disulfide reductase n=1 Tax=Flavobacteriia bacterium TaxID=2044941 RepID=A0A850LB11_9BACT)

HSP 1 Score: 326 bits (835), Expect = 1.310e-108
Identity = 156/271 (57.56%), Postives = 208/271 (76.75%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAG-FQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQKR 810
            ST+DKLEIGGVPFI+ N KP R+EALEYYR+V     L  RL E + +V K E G F ++T K  +   Y+ LATGFYD+ + L IPGE LSKVAHYY++ HPY+ Q++A++GA NSAVDAALE YRKGA +V++++R DEI  RVKYWV+PD+ NRI EGS+KA F S + EIKE+ +  + + S+  +PND VLALTGY P++ FL ++G++ + +E RKP+Y+ ETME+++ GL+LAGVICGG+ETNKWFIENSR+HAN I+  I +R
Sbjct:   52 STSDKLEIGGVPFISHNHKPTRSEALEYYRRVAQSWNLNTRLYESVSSVEKREDGMFYVRTSKTSFVASYVVLATGFYDIPHELGIPGEHLSKVAHYYREAHPYYGQKLAIIGAMNSAVDAALECYRKGA-DVTLVVRGDEIGERVKYWVKPDIENRIAEGSVKAMFNSRVTEIKEESITIETSDSVVELPNDFVLALTGYEPNYQFLSDMGIEVADDELRKPVYDPETMETNVSGLYLAGVICGGMETNKWFIENSRVHANAILDHIGRR 321          
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Match: A0A3R7XLI6_9FLAO (YpdA family putative bacillithiol disulfide reductase n=1 Tax=Flavobacteriaceae bacterium TMED121 TaxID=1986703 RepID=A0A3R7XLI6_9FLAO)

HSP 1 Score: 325 bits (832), Expect = 3.500e-108
Identity = 157/269 (58.36%), Postives = 206/269 (76.58%), Query Frame = 1
Query:    1 STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVNKSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDPHPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVRPDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGYRPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNKWFIENSRIHANLIVAEIQK 807
            ST+DKLEIG VPFI+ N KP RAEALEYYR+V    +L LRL E +  + K +AGF+L+T K  Y  K + L+TGFYD+   L++PGE+L KV HYYK+PH +F   VAV+G+ANSAVD ALELYRKGAK V+MIIRE+EI   VKYW RPD+ NRI+EGSIKAYFK+++ EI E ++ FK       I ND VLA+TGY+P+F  L+++G++F  +E + P+YN  TM+S+  G++LAGV+CGGL+TNKWFIENSRIHAN+I+  ++K
Sbjct:   50 STSDKLEIGEVPFISHNPKPTRAEALEYYRRVSSHWELSLRLYEEIKVIEKLDAGFELKTTKGIYKTKKIVLSTGFYDIPYLLDVPGEDLDKVMHYYKEPHTFFGMNVAVIGSANSAVDVALELYRKGAKSVTMIIREEEIGKNVKYWARPDINNRIKEGSIKAYFKADIKEITEDKIRFKIPEKEIVIENDFVLAMTGYKPNFQLLESLGVEFQEDEFKTPVYNSITMQSNQMGVYLAGVVCGGLKTNKWFIENSRIHANIIMDHVKK 318          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98543.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7H0VDU5_9FLAO4.220e-14373.53YpdA family putative bacillithiol disulfide reduct... [more]
A0A2T4WJ76_9BACT3.230e-11159.41YpdA family putative bacillithiol disulfide reduct... [more]
A0A4Q9FIC7_9FLAO1.100e-10958.96YpdA family putative bacillithiol disulfide reduct... [more]
UPI001BB711AA2.610e-10958.39YpdA family putative bacillithiol disulfide reduct... [more]
A0A2E1E8Z0_9FLAO4.160e-10957.62Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
UPI0015BD17494.920e-10959.93YpdA family putative bacillithiol disulfide reduct... [more]
A0A3D4C7F8_9FLAO7.450e-10959.19YpdA family putative bacillithiol disulfide reduct... [more]
UPI0014925C981.130e-10857.35YpdA family putative bacillithiol disulfide reduct... [more]
A0A850LB11_9BACT1.310e-10857.56YpdA family putative bacillithiol disulfide reduct... [more]
A0A3R7XLI6_9FLAO3.500e-10858.36YpdA family putative bacillithiol disulfide reduct... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98543contigL-digitata_M_contig98543:3..824 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog504487.JCM19302_4237
Preferred nameypdA
PFAMsPyr_redox_3
Model size822
Max annot lvl976|Bacteroidetes
KEGG rclassRC00013,RC02518,RC02873
KEGG koko:K00384
KEGG ReactionR02016,R03596,R09372
KEGG Pathwayko00450,map00450
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.56e-107
EggNOG OGsCOG0492@1|root,COG0492@2|Bacteria,4NDVS@976|Bacteroidetes,1HXB3@117743|Flavobacteriia
EC1.8.1.9
DescriptionPFAM Pyridine nucleotide-disulphide oxidoreductase
Cds size822
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408642.9621868-CDS-L-digitata_M_contig98543:2..8241682408642.9621868-CDS-L-digitata_M_contig98543:2..824Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig98543 3..824 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98543.1.1prot_L-digitata_M_contig98543.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig98543 3..824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig98543.1.1

>prot_L-digitata_M_contig98543.1.1 ID=prot_L-digitata_M_contig98543.1.1|Name=mRNA_L-digitata_M_contig98543.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=274bp
STADKLEIGGVPFIAQNTKPNRAEALEYYRKVCMLHKLELRLAERLLAVN
KSEAGFQLQTDKAEYACKYLTLATGFYDLVNPLNIPGEELSKVAHYYKDP
HPYFEQRVAVVGAANSAVDAALELYRKGAKEVSMIIREDEISPRVKYWVR
PDMLNRIEEGSIKAYFKSELIEIKEKEVLFKQNGSLKRIPNDAVLALTGY
RPDFDFLQNIGLDFSHEESRKPIYNGETMESSIPGLFLAGVICGGLETNK
WFIENSRIHANLIVAEIQKRVES*
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mRNA from alignment at L-digitata_M_contig98543:3..824+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig98543.1.1 ID=mRNA_L-digitata_M_contig98543.1.1|Name=mRNA_L-digitata_M_contig98543.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=822bp|location=Sequence derived from alignment at L-digitata_M_contig98543:3..824+ (Laminaria digitata LdigPH10_18mv male)
TCCACCGCCGATAAATTGGAAATTGGCGGTGTTCCCTTTATTGCTCAAAA TACCAAGCCCAATCGCGCCGAGGCCTTAGAGTACTACCGGAAAGTTTGCA TGCTCCATAAACTTGAGCTTCGCTTAGCGGAAAGACTCCTGGCCGTAAAC AAAAGCGAAGCTGGATTTCAATTGCAAACTGATAAGGCCGAATATGCTTG TAAGTACTTAACCCTGGCTACTGGCTTTTACGATTTGGTTAATCCGCTTA ATATCCCCGGTGAAGAACTAAGCAAAGTGGCTCATTACTATAAAGATCCT CATCCCTATTTCGAACAAAGAGTGGCTGTAGTAGGCGCGGCGAACTCGGC CGTAGATGCGGCTTTGGAGCTTTATCGCAAAGGGGCCAAAGAAGTGAGTA TGATTATTCGCGAGGATGAGATTTCACCGCGGGTAAAGTATTGGGTGCGT CCGGATATGCTCAATCGCATTGAGGAAGGTTCGATTAAGGCCTATTTTAA GTCGGAACTTATTGAGATAAAAGAAAAGGAGGTTTTATTTAAGCAGAATG GCAGCTTAAAGCGAATTCCCAATGATGCCGTTTTAGCCCTAACTGGTTAT CGTCCCGATTTTGACTTTTTACAAAATATTGGTTTGGACTTTTCGCATGA GGAAAGTCGCAAGCCCATTTACAATGGCGAAACCATGGAAAGCTCAATCC CGGGTTTATTTCTTGCCGGCGTTATTTGCGGTGGTTTAGAAACCAATAAA TGGTTTATTGAAAACTCGCGCATTCACGCTAATTTGATTGTAGCGGAAAT TCAAAAAAGAGTGGAGTCTTAA
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Coding sequence (CDS) from alignment at L-digitata_M_contig98543:3..824+

>mRNA_L-digitata_M_contig98543.1.1 ID=mRNA_L-digitata_M_contig98543.1.1|Name=mRNA_L-digitata_M_contig98543.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=822bp|location=Sequence derived from alignment at L-digitata_M_contig98543:3..824+ (Laminaria digitata LdigPH10_18mv male)
TCCACCGCCGATAAATTGGAAATTGGCGGTGTTCCCTTTATTGCTCAAAA
TACCAAGCCCAATCGCGCCGAGGCCTTAGAGTACTACCGGAAAGTTTGCA
TGCTCCATAAACTTGAGCTTCGCTTAGCGGAAAGACTCCTGGCCGTAAAC
AAAAGCGAAGCTGGATTTCAATTGCAAACTGATAAGGCCGAATATGCTTG
TAAGTACTTAACCCTGGCTACTGGCTTTTACGATTTGGTTAATCCGCTTA
ATATCCCCGGTGAAGAACTAAGCAAAGTGGCTCATTACTATAAAGATCCT
CATCCCTATTTCGAACAAAGAGTGGCTGTAGTAGGCGCGGCGAACTCGGC
CGTAGATGCGGCTTTGGAGCTTTATCGCAAAGGGGCCAAAGAAGTGAGTA
TGATTATTCGCGAGGATGAGATTTCACCGCGGGTAAAGTATTGGGTGCGT
CCGGATATGCTCAATCGCATTGAGGAAGGTTCGATTAAGGCCTATTTTAA
GTCGGAACTTATTGAGATAAAAGAAAAGGAGGTTTTATTTAAGCAGAATG
GCAGCTTAAAGCGAATTCCCAATGATGCCGTTTTAGCCCTAACTGGTTAT
CGTCCCGATTTTGACTTTTTACAAAATATTGGTTTGGACTTTTCGCATGA
GGAAAGTCGCAAGCCCATTTACAATGGCGAAACCATGGAAAGCTCAATCC
CGGGTTTATTTCTTGCCGGCGTTATTTGCGGTGGTTTAGAAACCAATAAA
TGGTTTATTGAAAACTCGCGCATTCACGCTAATTTGATTGTAGCGGAAAT
TCAAAAAAGAGTGGAGTCTTAA
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