mRNA_L-digitata_M_contig98525.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: A0A5C6QW38_9GAMM (DAO_C domain-containing protein n=1 Tax=Colwellia sp. C1TZA3 TaxID=2508879 RepID=A0A5C6QW38_9GAMM) HSP 1 Score: 84.7 bits (208), Expect = 2.820e-19 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYA 201
WSA+ EQV HLDDL+LRRTRLG +LPQG LP+++A+ P L WSE +W E+ RY WQ +Y+
Sbjct: 68 WSARFEQVHHLDDLLLRRTRLGNVLPQGARELLPQVKAQCSPYLSWSELKWQQEISRYLALWQNSYS 134
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: UPI0019EF9D8D (Glycerol-3-phosphate dehydrogenase/oxidase n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019EF9D8D) HSP 1 Score: 89.0 bits (219), Expect = 5.810e-19 Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAY 198
W+A+ E V+HLDDL+LRRTRLGL+LPQGGL+CL ++A LDW E RW E+ RY++ WQR Y
Sbjct: 458 WAARAELVVHLDDLLLRRTRLGLLLPQGGLACLDHIRAVCEGELDWDEARWEQEIARYQKLWQRYY 523
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: UPI00191BE35A (glycerol-3-phosphate dehydrogenase/oxidase n=1 Tax=Thermus thermamylovorans TaxID=2509362 RepID=UPI00191BE35A) HSP 1 Score: 88.6 bits (218), Expect = 7.600e-19 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYAP 204
W+A+ E V+HLDDL+LRR RLGL LP+GG+ L RL+ + P+L W E RW AEV+RYR W+ AY+P
Sbjct: 450 WAAEREGVVHLDDLLLRRVRLGLTLPEGGIPLLERLRPWLQPALGWDETRWQAEVERYRGVWRSAYSP 517
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: UPI001BDF1A31 (glycerol-3-phosphate dehydrogenase/oxidase n=1 Tax=Bacillus sp. SM2101 TaxID=2805366 RepID=UPI001BDF1A31) HSP 1 Score: 88.2 bits (217), Expect = 1.050e-18 Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYAP 204
W+A++E ++HLDDL+LRR RLG+ILP+G +S L RL+ EV LDW ++RW EV RY++ W++ Y+P
Sbjct: 452 WAAKYESIVHLDDLLLRRVRLGMILPEGAISILERLKVEVQSLLDWDDERWDDEVARYKKLWKQGYSP 519
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: A0A212RV93_9CHLR (Glycerol-3-phosphate dehydrogenase n=1 Tax=Thermoflexus hugenholtzii JAD2 TaxID=877466 RepID=A0A212RV93_9CHLR) HSP 1 Score: 87.4 bits (215), Expect = 1.940e-18 Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYAP 204
W+A+ E V+HLDDL+LRRTRLGL LP+GGL L R +A + L W E RWA EVQRYRQ W+ +Y P
Sbjct: 449 WAARFEGVVHLDDLLLRRTRLGLCLPEGGLPFLRRHRARLQAMLGWDEARWAWEVQRYRQIWETSYQP 516
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: A0A523BS76_9CHLR (Glycerol-3-phosphate dehydrogenase/oxidase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A523BS76_9CHLR) HSP 1 Score: 87.4 bits (215), Expect = 1.990e-18 Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYAPQRINCAP 225
W+A+ EQV+HL+DL+LRRTRLGL+LP GGL+ ++A P L WS+Q W AE YR WQR+Y+P +P
Sbjct: 459 WAARAEQVVHLEDLLLRRTRLGLLLPVGGLAEFDHIRAVCQPELGWSDQHWQAEANNYRALWQRSYSPPGAEYSP 533
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: A0A2A5M149_9GAMM (FAD-dependent oxidoreductase n=1 Tax=Marinobacter sp. ANT_B65 TaxID=2039467 RepID=A0A2A5M149_9GAMM) HSP 1 Score: 87.0 bits (214), Expect = 2.710e-18 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYA 201
W+ HE V+HLDDLMLRRTRLGLILPQGG + LP L+ L+W +++W AEV RY+Q W +AY+
Sbjct: 464 WACTHEDVLHLDDLMLRRTRLGLILPQGGKALLPGLKQLCQSLLEWDDEQWFAEVARYQQLWLKAYS 530
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: A0A1F8QS17_9CHLR (FAD-dependent oxidoreductase n=1 Tax=Chloroflexi bacterium RBG_16_57_11 TaxID=1797651 RepID=A0A1F8QS17_9CHLR) HSP 1 Score: 86.7 bits (213), Expect = 3.670e-18 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYAP 204
W+A+ E V+HLDDL+LRRTRLGL+LP+GG C ++A V P L W E RW EV Y WQR Y+P
Sbjct: 459 WAARAEAVVHLDDLLLRRTRLGLLLPRGGKDCFQSIRAVVQPELGWEEARWETEVTTYLDLWQRCYSP 526
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: UPI001B80D0C6 (glycerol-3-phosphate dehydrogenase/oxidase n=1 Tax=Cognaticolwellia mytili TaxID=1888913 RepID=UPI001B80D0C6) HSP 1 Score: 86.3 bits (212), Expect = 5.190e-18 Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYA 201
WS + EQV HLDDL+LRRTRLG +LPQG LP+++ P L WSEQ+W EV RY WQ+AY+
Sbjct: 532 WSVRFEQVQHLDDLLLRRTRLGNVLPQGARELLPKIKTLCSPYLSWSEQKWQEEVSRYLAIWQKAYS 598
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Match: A0A3S9QBH5_9GAMM (DAO_C domain-containing protein n=1 Tax=Colwellia sp. Arc7-635 TaxID=2497879 RepID=A0A3S9QBH5_9GAMM) HSP 1 Score: 83.6 bits (205), Expect = 6.050e-18 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 WSAQHEQVMHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYRQAWQRAYA 201
WS + EQV HLDDL+LRRTRLG +LP G LP+++A P L WSEQ+W AE+ RY WQ +Y+
Sbjct: 162 WSVKFEQVQHLDDLLLRRTRLGNVLPAGARELLPKIKALCSPYLSWSEQQWQAEITRYLSIWQVSYS 228 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98525.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig98525.1.1 >prot_L-digitata_M_contig98525.1.1 ID=prot_L-digitata_M_contig98525.1.1|Name=mRNA_L-digitata_M_contig98525.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=67bp MHLDDLMLRRTRLGLILPQGGLSCLPRLQAEVGPSLDWSEQRWAAEVQRYback to top mRNA from alignment at L-digitata_M_contig98525:1..225+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig98525.1.1 ID=mRNA_L-digitata_M_contig98525.1.1|Name=mRNA_L-digitata_M_contig98525.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=225bp|location=Sequence derived from alignment at L-digitata_M_contig98525:1..225+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig98525:1..225+ >mRNA_L-digitata_M_contig98525.1.1 ID=mRNA_L-digitata_M_contig98525.1.1|Name=mRNA_L-digitata_M_contig98525.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=201bp|location=Sequence derived from alignment at L-digitata_M_contig98525:1..225+ (Laminaria digitata LdigPH10_18mv male)back to top |