mRNA_L-digitata_M_contig98464.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig98464.1.1
Unique NamemRNA_L-digitata_M_contig98464.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A3D4UH74_9BACT (ABC transmembrane type-1 domain-containing protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UH74_9BACT)

HSP 1 Score: 405 bits (1042), Expect = 1.280e-140
Identity = 211/230 (91.74%), Postives = 221/230 (96.09%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRIG 690
            DFGPSLKYDDKTVNEIIR +LPVSVTLGA+AILIAL IG  SG+IGAVKPNS ADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIE+LGADYIRTARAKGNPE VVL+KHALKNAFLPVLS+LGPATA AMTGSFVIERVFTVPG+G+HFV+AVQNKDLFLIIG VLVFSTMLIVFNL+VDILYRWIDPRI 
Sbjct:  105 DFGPSLKYDDKTVNEIIRDALPVSVTLGASAILIALIIGTISGIIGAVKPNSIADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIESLGADYIRTARAKGNPEHVVLIKHALKNAFLPVLSYLGPATAFAMTGSFVIERVFTVPGMGEHFVSAVQNKDLFLIIGTVLVFSTMLIVFNLVVDILYRWIDPRIA 334
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A3M2CNQ8_9BACT (ABC transporter permease n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CNQ8_9BACT)

HSP 1 Score: 352 bits (903), Expect = 1.760e-119
Identity = 178/228 (78.07%), Postives = 207/228 (90.79%), Query Frame = 1 
Query:    4 FGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
             GPSL+YDD TVNEI+ S+LPVSVTLGA AI+IAL +G+T+GV+GAVKPNS ADL+TLGVA++GISLPSFV GTVLLL FS+ +  FP A+WGT +S+ LP+  LSLPFAAYIARLTRMGMI+ALGADYIRTARAKG PER VL KHALKNAFLPVLSFLGPA A+AMTGSF++ERVFTVPG+G+HFVNAVQNKDLFLI+GVVL+F+TMLI+FNL VD+LYRW+DPRI
Sbjct:  106 LGPSLEYDDWTVNEIVASALPVSVTLGAAAIIIALVVGVTAGVVGAVKPNSLADLATLGVALIGISLPSFVIGTVLLLGFSLLIPIFPAAEWGTPKSLVLPSVTLSLPFAAYIARLTRMGMIDALGADYIRTARAKGAPERTVLFKHALKNAFLPVLSFLGPAAALAMTGSFIVERVFTVPGMGQHFVNAVQNKDLFLIMGVVLIFATMLILFNLAVDVLYRWVDPRI 333
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A5M4D944_9CYAN (ABC transporter permease n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D944_9CYAN)

HSP 1 Score: 345 bits (885), Expect = 1.020e-116
Identity = 176/229 (76.86%), Postives = 204/229 (89.08%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
            D GPSL Y+D +VNEII S+LPVS TLG  AILIA  IG+T+GV+GA++PNS ADL+TLGVA++GISLPSFVTGTVLLL+FS+W+  FPVA WGTL  +  P+ ALSLPFAAYIARLTRMGMIE L ADYIRTARAKG  ER V+LKHALKNAFLPVLSFLGPATA+AMTGSF++ERVF++PGLG+HFVNAVQ KDLFLI+GVVLVF+TMLIVFNL+VD+LY W+DPRI
Sbjct:  106 DLGPSLYYEDWSVNEIIGSALPVSATLGVFAILIATGIGVTAGVVGAIRPNSPADLTTLGVALIGISLPSFVTGTVLLLLFSVWIPIFPVAGWGTLDRLIQPSIALSLPFAAYIARLTRMGMIETLSADYIRTARAKGLSERTVILKHALKNAFLPVLSFLGPATALAMTGSFIVERVFSIPGLGQHFVNAVQTKDLFLIVGVVLVFATMLIVFNLVVDLLYHWVDPRI 334
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A7D8UFN3_9BACT (ABC transporter permease n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7D8UFN3_9BACT)

HSP 1 Score: 341 bits (875), Expect = 3.370e-115
Identity = 176/229 (76.86%), Postives = 204/229 (89.08%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
            D GPSL+Y+D +VNEII  SLPVSVTLGA AI+IA+ +G+ +GV+GAVKPNS ADL+TL +A+VGISLPSFV GTVLLL+F++ +  FPV  WG+LR++ LPA  LSLPFAAYIARLTRMGMI+ALG DYIRTARAKG  E+ VLLKHALKNAFLPVLSFLGPATA AMTGSFV+ERVF VPGLG+HFVNAVQNKDLFLI+GVVL+FSTMLI+FNL VD+LYRW+DPRI
Sbjct:  106 DLGPSLQYEDWSVNEIIAGSLPVSVTLGAAAIVIAVIVGVFAGVVGAVKPNSPADLATLAIALVGISLPSFVIGTVLLLLFAVLIPVFPVGGWGSLRTMVLPAVTLSLPFAAYIARLTRMGMIDALGTDYIRTARAKGLDEKRVLLKHALKNAFLPVLSFLGPATAYAMTGSFVVERVFNVPGLGQHFVNAVQNKDLFLIMGVVLIFSTMLILFNLAVDVLYRWVDPRI 334
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: UPI001BA9519B (ABC transporter permease n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=UPI001BA9519B)

HSP 1 Score: 341 bits (874), Expect = 4.470e-115
Identity = 178/228 (78.07%), Postives = 202/228 (88.60%), Query Frame = 1 
Query:    4 FGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
             GPSL+Y D+ VNEII  SLP+SVTLG  AILIAL IG+T+GV+GA++PNS  DLSTL VA+VGISLPSFV GTVLLLVF++WLG FPVA WG   +I LPAF LSLPFAAYIARLTRMGM++ LGAD+IRTARAKG  E  VLL+HALKNAFLPVLS+LGPATA AMTGSFV+ERVFTVPG+G+HFVNAVQNKDLFLIIGVVL+FSTMLI+FNL VD+LYRW+DPRI
Sbjct:  107 LGPSLQYRDRNVNEIIAGSLPISVTLGGLAILIALAIGLTTGVLGAIRPNSWLDLSTLAVALVGISLPSFVIGTVLLLVFAVWLGVFPVASWGPYGAI-LPAFTLSLPFAAYIARLTRMGMLDCLGADFIRTARAKGVSESRVLLRHALKNAFLPVLSYLGPATAYAMTGSFVVERVFTVPGMGQHFVNAVQNKDLFLIIGVVLIFSTMLILFNLAVDVLYRWVDPRI 333
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A7C3Q2T3_9BACT (ABC transporter permease n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3Q2T3_9BACT)

HSP 1 Score: 338 bits (867), Expect = 5.350e-114
Identity = 171/230 (74.35%), Postives = 199/230 (86.52%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRIG 690
            D GPSL+Y D+ VN+II SSLPVS+T+G+ AI+IAL +G+++GV+GA KP S  D STL +A+VGISLP+FV GTVLL VFS+WL WFP+  W + R + LPAF LSLPFAAYIARLTRMGMIEAL ADYIRTARAKG  E  +L KHALKNAFLPVLS+LGPATAMAMTGSFV+ERVF VPGLG+HFVNAVQNKDLFLIIGVVL+FSTML+V NL+VD+LYRW+DPRI 
Sbjct:  106 DLGPSLQYSDQVVNDIIASSLPVSMTVGSLAIVIALALGVSAGVVGASKPGSLLDHSTLALALVGISLPTFVVGTVLLFVFSVWLRWFPIGTWSSPRDVVLPAFTLSLPFAAYIARLTRMGMIEALQADYIRTARAKGVAEFNILFKHALKNAFLPVLSYLGPATAMAMTGSFVVERVFNVPGLGQHFVNAVQNKDLFLIIGVVLIFSTMLVVMNLVVDVLYRWVDPRIA 335
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A4P5X256_9BACT (Peptide ABC transporter permease n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A4P5X256_9BACT)

HSP 1 Score: 337 bits (864), Expect = 1.580e-113
Identity = 174/229 (75.98%), Postives = 199/229 (86.90%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
            DFGPSL+Y D+ VNEII  SLPVSVTLG  AI+IAL +G+++GVIGAVKPNS ADL+TL VA++GISLPSFV GT+LL VFS+WLGWF V  W    S+ LPA  LSLPFAAYIARLTRMGM+E L +D+IRTARAKG     V LKHALKNAFLPVLS+LGPATA+AMTGSFV+E VFTVPG+G+HFVNAVQNKDLFLI+GVVLVFSTML+VFNLIVD+LYRW+DPRI
Sbjct:  107 DFGPSLQYRDQRVNEIIGGSLPVSVTLGGVAIIIALVLGLSAGVIGAVKPNSFADLATLAVALIGISLPSFVVGTILLTVFSLWLGWFGVGVWNPPSSLVLPAVTLSLPFAAYIARLTRMGMLEHLSSDFIRTARAKGVGPMGVYLKHALKNAFLPVLSYLGPATALAMTGSFVVEVVFTVPGMGQHFVNAVQNKDLFLILGVVLVFSTMLVVFNLIVDVLYRWVDPRI 335
[Close]
BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: UPI0019946469 (ABC transporter permease n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI0019946469)

HSP 1 Score: 328 bits (842), Expect = 3.130e-110
Identity = 166/229 (72.49%), Postives = 199/229 (86.90%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
            DFGPSL Y+D  VN+I+RSSLPVS TLGA AIL+AL IG+ +G++GA++PNS  D+STL VA++GISLP+FV GT LL+VFS+W+  FP+ QWG  +   LPA  LSLPFAAYIARLTRMGM++ LGADYIRTARAKG  E  +LLKHALKNAFLPVLS+LGPATA+AMTGSFV+ERVFTV G+G+HFVN V NKDLFLIIGVVLV+STML++FNLIVD++YRW+DPRI
Sbjct:  105 DFGPSLLYEDWRVNDILRSSLPVSATLGAAAILLALVIGLGAGILGAIRPNSFLDISTLVVALIGISLPTFVIGTALLIVFSVWIQMFPIGQWGP-QGAVLPALTLSLPFAAYIARLTRMGMLDVLGADYIRTARAKGVSETRILLKHALKNAFLPVLSYLGPATALAMTGSFVVERVFTVQGMGQHFVNGVLNKDLFLIIGVVLVYSTMLVLFNLIVDVMYRWVDPRI 332
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BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A3M2BAD2_9BACT (ABC transporter permease (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BAD2_9BACT)

HSP 1 Score: 328 bits (842), Expect = 3.460e-110
Identity = 167/229 (72.93%), Postives = 197/229 (86.03%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
            D GPSL Y+D +VNEI+  +LPVS TLG  AILIA  +G+ +GVIGA+KPNS  DL TL +A++GISLPSFVTGT+LLL+F +W+  FPVA WGTL  +  P+ ALSLPFAAYIARLTRMGMIE L ADYIRTARAKG  E+ V+LKHALKNAFLPVLSFLGPATA+AMTGSF++ERVFT+PG+G+HFVNAVQ KDLFLIIGVVLVF+T+LI+FNL VD+LY W+DPRI
Sbjct:  106 DLGPSLNYEDWSVNEILAFALPVSATLGIFAILIATVVGVAAGVIGAIKPNSIVDLCTLVIALIGISLPSFVTGTILLLLFCVWIPLFPVAGWGTLDRLIQPSIALSLPFAAYIARLTRMGMIETLHADYIRTARAKGVREQQVILKHALKNAFLPVLSFLGPATALAMTGSFIVERVFTIPGMGEHFVNAVQTKDLFLIIGVVLVFATLLILFNLAVDLLYHWVDPRI 334
[Close]
BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Match: A0A6I7PTD0_9BACT (ABC transporter permease n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6I7PTD0_9BACT)

HSP 1 Score: 327 bits (838), Expect = 5.310e-110
Identity = 165/229 (72.05%), Postives = 198/229 (86.46%), Query Frame = 1 
Query:    1 DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKPNSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIALPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHALKNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLIIGVVLVFSTMLIVFNLIVDILYRWIDPRI 687
            DFGPS +Y D TVN+I+ S+LPVSV LG +AILIAL IG+ +GV+GAV+PNS AD++TL +A++GIS+P+FV G+VLL+VF +WLG   V  WGT+  + LPA  LSLPFAAYIARLTRMGMIE+LGADYIRTARAKG  ERVV+L+HALKNAFLPVLSFLGPA A AMTGSFV+E+VF VPGLG+HFVN V NKDLFLI+GVVL++++MLI FNLIVDILY W+DPRI
Sbjct:   76 DFGPSFRYPDWTVNDIVASALPVSVALGLSAILIALMIGVAAGVVGAVRPNSFADIATLVIALIGISMPAFVIGSVLLIVFPVWLGIGSVGAWGTIPDMILPAITLSLPFAAYIARLTRMGMIESLGADYIRTARAKGVAERVVILRHALKNAFLPVLSFLGPAAAQAMTGSFVVEKVFNVPGLGQHFVNGVLNKDLFLIMGVVLIYASMLIAFNLIVDILYHWVDPRI 304
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98464.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D4UH74_9BACT1.280e-14091.74ABC transmembrane type-1 domain-containing protein... [more]
A0A3M2CNQ8_9BACT1.760e-11978.07ABC transporter permease n=1 Tax=Planctomycetes ba... [more]
A0A5M4D944_9CYAN1.020e-11676.86ABC transporter permease n=1 Tax=Cyanobacteria bac... [more]
A0A7D8UFN3_9BACT3.370e-11576.86ABC transporter permease n=1 Tax=Phycisphaerales b... [more]
UPI001BA9519B4.470e-11578.07ABC transporter permease n=2 Tax=unclassified Lept... [more]
A0A7C3Q2T3_9BACT5.350e-11474.35ABC transporter permease n=1 Tax=Phycisphaerales b... [more]
A0A4P5X256_9BACT1.580e-11375.98Peptide ABC transporter permease n=1 Tax=Phycispha... [more]
UPI00199464693.130e-11072.49ABC transporter permease n=1 Tax=Pyrinomonadaceae ... [more]
A0A3M2BAD2_9BACT3.460e-11072.93ABC transporter permease (Fragment) n=1 Tax=Planct... [more]
A0A6I7PTD0_9BACT5.310e-11072.05ABC transporter permease n=1 Tax=Phycisphaerales b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98464contigL-digitata_M_contig98464:3..695 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog448385.sce3458
Preferred nameappB
PFAMsBPD_transp_1
Model size693
Max annot lvl28221|Deltaproteobacteria
KEGG koko:K02033,ko:K15581
KEGG TC3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25
KEGG Pathwayko01501,ko02010,ko02024,map01501,map02010,map02024
KEGG ModuleM00239,M00439
Hectar predicted targeting categorysignal anchor
Exons1
Evalue9.65e-78
EggNOG OGsCOG0601@1|root,COG0601@2|Bacteria,1MU8Z@1224|Proteobacteria,43AFB@68525|delta/epsilon subdivisions,2X5XK@28221|Deltaproteobacteria,2Z2YK@29|Myxococcales
DescriptionBinding-protein-dependent transport system inner membrane component
Cds size693
COG categoryEP
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408641.935666-CDS-L-digitata_M_contig98464:2..6951682408641.935666-CDS-L-digitata_M_contig98464:2..695Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig98464 3..695 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98464.1.1prot_L-digitata_M_contig98464.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig98464 3..695 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig98464.1.1

>prot_L-digitata_M_contig98464.1.1 ID=prot_L-digitata_M_contig98464.1.1|Name=mRNA_L-digitata_M_contig98464.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=231bp
DFGPSLKYDDKTVNEIIRSSLPVSVTLGATAILIALFIGITSGVIGAVKP
NSAADLSTLGVAMVGISLPSFVTGTVLLLVFSIWLGWFPVAQWGTLRSIA
LPAFALSLPFAAYIARLTRMGMIEALGADYIRTARAKGNPERVVLLKHAL
KNAFLPVLSFLGPATAMAMTGSFVIERVFTVPGLGKHFVNAVQNKDLFLI
IGVVLVFSTMLIVFNLIVDILYRWIDPRIG*
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mRNA from alignment at L-digitata_M_contig98464:3..695+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig98464.1.1 ID=mRNA_L-digitata_M_contig98464.1.1|Name=mRNA_L-digitata_M_contig98464.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=693bp|location=Sequence derived from alignment at L-digitata_M_contig98464:3..695+ (Laminaria digitata LdigPH10_18mv male)
GACTTCGGCCCCTCCCTCAAATACGACGACAAGACCGTGAACGAGATCAT
CCGCAGTTCGCTGCCTGTCTCGGTCACGCTGGGCGCAACCGCAATCCTTA
TTGCGCTGTTCATCGGGATCACCTCGGGTGTCATCGGCGCGGTCAAGCCC
AACTCCGCGGCCGACCTCTCCACGCTGGGCGTGGCCATGGTTGGGATCTC
GCTGCCGAGCTTTGTCACCGGCACCGTGCTGCTGCTGGTGTTCTCTATCT
GGCTTGGCTGGTTCCCTGTCGCCCAGTGGGGCACGCTCCGCAGCATCGCC
CTCCCCGCCTTCGCGCTCTCGCTGCCCTTCGCTGCTTACATCGCTCGGCT
CACTCGCATGGGCATGATTGAAGCCCTCGGTGCCGACTACATCCGCACCG
CACGCGCCAAGGGCAACCCCGAGCGGGTGGTGCTGCTCAAGCACGCCCTG
AAGAATGCCTTCCTGCCCGTGCTCAGCTTCCTTGGCCCAGCCACGGCCAT
GGCCATGACCGGCTCGTTTGTCATCGAGCGCGTCTTTACGGTGCCCGGGT
TGGGCAAGCACTTCGTCAACGCCGTGCAGAACAAGGACCTCTTCCTGATC
ATCGGCGTGGTGCTCGTTTTCTCGACCATGCTAATCGTGTTCAACCTGAT
CGTGGACATCCTCTACCGCTGGATCGATCCACGCATCGGCTGA
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Coding sequence (CDS) from alignment at L-digitata_M_contig98464:3..695+

>mRNA_L-digitata_M_contig98464.1.1 ID=mRNA_L-digitata_M_contig98464.1.1|Name=mRNA_L-digitata_M_contig98464.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=693bp|location=Sequence derived from alignment at L-digitata_M_contig98464:3..695+ (Laminaria digitata LdigPH10_18mv male)
GACTTCGGCCCCTCCCTCAAATACGACGACAAGACCGTGAACGAGATCAT
CCGCAGTTCGCTGCCTGTCTCGGTCACGCTGGGCGCAACCGCAATCCTTA
TTGCGCTGTTCATCGGGATCACCTCGGGTGTCATCGGCGCGGTCAAGCCC
AACTCCGCGGCCGACCTCTCCACGCTGGGCGTGGCCATGGTTGGGATCTC
GCTGCCGAGCTTTGTCACCGGCACCGTGCTGCTGCTGGTGTTCTCTATCT
GGCTTGGCTGGTTCCCTGTCGCCCAGTGGGGCACGCTCCGCAGCATCGCC
CTCCCCGCCTTCGCGCTCTCGCTGCCCTTCGCTGCTTACATCGCTCGGCT
CACTCGCATGGGCATGATTGAAGCCCTCGGTGCCGACTACATCCGCACCG
CACGCGCCAAGGGCAACCCCGAGCGGGTGGTGCTGCTCAAGCACGCCCTG
AAGAATGCCTTCCTGCCCGTGCTCAGCTTCCTTGGCCCAGCCACGGCCAT
GGCCATGACCGGCTCGTTTGTCATCGAGCGCGTCTTTACGGTGCCCGGGT
TGGGCAAGCACTTCGTCAACGCCGTGCAGAACAAGGACCTCTTCCTGATC
ATCGGCGTGGTGCTCGTTTTCTCGACCATGCTAATCGTGTTCAACCTGAT
CGTGGACATCCTCTACCGCTGGATCGATCCACGCATCGGCTGA
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