mRNA_L-digitata_M_contig98085.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: A0A2E9I2U4_9RHOB (NAD_binding_9 domain-containing protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A2E9I2U4_9RHOB) HSP 1 Score: 96.3 bits (238), Expect = 6.020e-22 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 1
Query: 13 MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA
Sbjct: 1 MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 50
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: A0A2D9YMX8_9RHOB (NAD_binding_9 domain-containing protein n=1 Tax=Maritimibacter sp. TaxID=2003363 RepID=A0A2D9YMX8_9RHOB) HSP 1 Score: 55.1 bits (131), Expect = 2.070e-7 Identity = 32/54 (59.26%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 1 EGISMKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
EG M D R IAV+GLGPRG+GALE+LAA G+ L VDVFD PA GA
Sbjct: 3 EGSEMNAGD-DRRIAVIGLGPRGVGALEALAALAETRGLRLSVDVFDPFPAPGA 55
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: A0A2M8J711_9RHOB (NAD_binding_9 domain-containing protein n=1 Tax=Pseudooceanicola lipolyticus TaxID=2029104 RepID=A0A2M8J711_9RHOB) HSP 1 Score: 50.4 bits (119), Expect = 8.900e-6 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 1 EGISMKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
+ + M +D R IAVVGLGPRG+GALE+LA K G+ + VD+FD PA GA
Sbjct: 52 DAMDMLKD---RRIAVVGLGPRGVGALEALAGLAEKFGICVPVDLFDPHPAPGA 102
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: A0A4R3JGV4_9RHOB (FAD-NAD(P)-binding protein n=1 Tax=Primorskyibacter sedentarius TaxID=745311 RepID=A0A4R3JGV4_9RHOB) HSP 1 Score: 50.1 bits (118), Expect = 1.220e-5 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 13 MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
MK+ + S IA+VG+GPRGLGALE+L A + ++VDVFD PA GA
Sbjct: 1 MKKAEGSLRIAIVGMGPRGLGALEALRALRCEGDAPIRVDVFDPFPASGA 50
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: A0A1M4N2G3_9RHOB (NAD_binding_9 domain-containing protein n=2 Tax=Donghicola eburneus TaxID=393278 RepID=A0A1M4N2G3_9RHOB) HSP 1 Score: 49.7 bits (117), Expect = 1.660e-5 Identity = 28/50 (56.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 13 MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
M RD IAVVG+GPR LGALE+LAA+ L VD +D PACGA
Sbjct: 1 MGRDMVETRIAVVGMGPRSLGALEALAARLGNDAAPLSVDCYDPFPACGA 50
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: A0A254QQN1_9RHOB (NAD_binding_9 domain-containing protein n=1 Tax=Phaeobacter sp. 22II1-1F12B TaxID=1317111 RepID=A0A254QQN1_9RHOB) HSP 1 Score: 49.7 bits (117), Expect = 1.660e-5 Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 13 MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPA 153
MK D P+ IAV+G GPR LGALE+LAA R+ ++Q+D FD PA
Sbjct: 1 MKTDHPALRIAVIGAGPRSLGALEALAADLREEKRAVQIDTFDPFPA 47
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: UPI001EE2886B (FAD/NAD(P)-binding protein n=1 Tax=Heliomarina baculiformis TaxID=2872036 RepID=UPI001EE2886B) HSP 1 Score: 49.7 bits (117), Expect = 1.660e-5 Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 13 MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPA 153
MK D P+ IAV+G GPR LGALE+LAA R+ ++Q+D FD PA
Sbjct: 1 MKTDHPALRIAVIGAGPRSLGALEALAADLREEQRAVQIDTFDPFPA 47
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: UPI001C6A144A (FAD/NAD(P)-binding protein n=1 Tax=Hoeflea sp. WL0058 TaxID=2865987 RepID=UPI001C6A144A) HSP 1 Score: 48.5 bits (114), Expect = 4.260e-5 Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 22 DDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
D P++ IAVVG GPRGLGALE+LAA+ + G + VDV+D GA
Sbjct: 8 DKPAKRIAVVGCGPRGLGALEALAARLSREGSPMSVDVYDPFRMLGA 54
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: UPI00145BBC6E (FAD/NAD(P)-binding protein n=1 Tax=Pseudooceanicola onchidii TaxID=2562279 RepID=UPI00145BBC6E) HSP 1 Score: 48.1 bits (113), Expect = 5.840e-5 Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 40 IAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
IA++GLGPRGLGALE+LA GV L+VD+FD P GA
Sbjct: 9 IAIIGLGPRGLGALEALADCATARGVRLEVDIFDTYPEPGA 49
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Match: A0A2T7G1D1_9RHOB (NAD_binding_9 domain-containing protein n=1 Tax=Thalassorhabdomicrobium marinisediminis TaxID=2170577 RepID=A0A2T7G1D1_9RHOB) HSP 1 Score: 48.1 bits (113), Expect = 5.840e-5 Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 40 IAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGA 162
+A+VGLGPRGLGA+E+L + R+AG+ LQVD FD + GA
Sbjct: 10 VAIVGLGPRGLGAVEALILRAREAGLHLQVDAFDTVDHPGA 50 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98085.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig98085.2.1 >prot_L-digitata_M_contig98085.2.1 ID=prot_L-digitata_M_contig98085.2.1|Name=mRNA_L-digitata_M_contig98085.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=50bp MKRDDPSRMIAVVGLGPRGLGALESLAAQGRKAGVSLQVDVFDALPACGAback to top mRNA from alignment at L-digitata_M_contig98085:814..975+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig98085.2.1 ID=mRNA_L-digitata_M_contig98085.2.1|Name=mRNA_L-digitata_M_contig98085.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=162bp|location=Sequence derived from alignment at L-digitata_M_contig98085:814..975+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig98085:814..975+ >mRNA_L-digitata_M_contig98085.2.1 ID=mRNA_L-digitata_M_contig98085.2.1|Name=mRNA_L-digitata_M_contig98085.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=150bp|location=Sequence derived from alignment at L-digitata_M_contig98085:814..975+ (Laminaria digitata LdigPH10_18mv male)back to top |