mRNA_L-digitata_M_contig9768.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: D7FW86_ECTSI (Sterol C-5 desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW86_ECTSI) HSP 1 Score: 245 bits (625), Expect = 1.250e-79 Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 1
Query: 1 RCYFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
RCYF+ SDVGG +GYV+YT VYL VEIGIYWMHRTLHTNKFLYKYVHALHHKYN+ ETLSPWASIAFNPLDG LQACPYVICLFFIPCHYYTHMAMF FTAIWATNIHDAV GN+EP+MGAKYHTV
Sbjct: 119 RCYFHFSDVGGLIGYVLYTVVYLTFVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSPETLSPWASIAFNPLDGVLQACPYVICLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNSEPIMGAKYHTV 245
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A7S2GVH5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVH5_9STRA) HSP 1 Score: 209 bits (533), Expect = 2.320e-65 Identity = 90/125 (72.00%), Postives = 110/125 (88.00%), Query Frame = 1
Query: 7 YFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
Y+++S++GGW Y+++T++YL+ VEIGIYWMHRTLHTNKFLYKYVH LHHKYN + L+PWASIAFNPLDG LQA PYV+ LF +PCHY TH+AM FTAIWATNIHDA+ GNTEP+MG+KYHT+
Sbjct: 158 YWSISEIGGWPQYLIFTAIYLSLVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKRQLLTPWASIAFNPLDGILQASPYVVALFLVPCHYLTHVAMLFFTAIWATNIHDALDGNTEPIMGSKYHTI 282
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A835YRT7_9STRA (Sterol C-5 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT7_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.040e-64 Identity = 91/127 (71.65%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 1 RCYFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
R Y+++S+VGGW YV T +YL VEIGIYWMHR LHTNK LYKYVHALHHKYN A+TL+PW S+AFNPLDG LQACPYVI LF +PCHY TH+ M FTA+WATNIHDA+ G+TEP+MG+KYHT+
Sbjct: 153 RAYYSISEVGGWPQYVALTLLYLTLVEIGIYWMHRKLHTNKILYKYVHALHHKYNKAQTLTPWCSVAFNPLDGILQACPYVIMLFVVPCHYLTHVVMLFFTAVWATNIHDALDGDTEPIMGSKYHTM 279
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A7S2GVG9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVG9_9STRA) HSP 1 Score: 201 bits (512), Expect = 2.450e-64 Identity = 88/118 (74.58%), Postives = 103/118 (87.29%), Query Frame = 1
Query: 28 GGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
GGW Y+++T++YL+ VEIGIYWMHRTLHTNKFLYKYVH LHHKYN + L+PWASIAFNPLDG LQA PYV+ LF +PCHY TH+AM FTAIWATNIHDA+ GNTEP+MG+KYHT+
Sbjct: 5 GGWPQYLIFTAIYLSLVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKRQLLTPWASIAFNPLDGILQASPYVVALFLVPCHYLTHVAMLFFTAIWATNIHDALDGNTEPIMGSKYHTI 122
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A4D9D2S1_9STRA (Fatty acid hydroxylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2S1_9STRA) HSP 1 Score: 207 bits (527), Expect = 5.630e-64 Identity = 88/127 (69.29%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 1 RCYFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
+CY+ + ++GGW Y+ +T +YLA VE+G+YWMHRTLH NK LYKY+H LHHKYN TLSPWAS+AFNP+DG LQA PYVICLF +PCHY TH+AM FTA+WATNIHDA+ GNTEPVMG+KYHT+
Sbjct: 171 QCYYYVEEIGGWPYYLAFTLLYLAMVEVGVYWMHRTLHENKVLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVICLFLVPCHYLTHVAMVFFTAVWATNIHDAMDGNTEPVMGSKYHTM 297
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A7R9UEU8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEU8_9STRA) HSP 1 Score: 204 bits (520), Expect = 4.590e-63 Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 1 RCYFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
R YF + ++GGW Y+ +T Y VEIGIYW+HRTLHTNKFLYKYVHALHHKYN+A TLSPWASIAFNPLDG QA PYV+ +F +PCHY TH+ M FT IW+TNIHDAV GN EP+MGAKYHTV
Sbjct: 178 RAYFYVDEIGGWSNYLAWTVAYFVLVEIGIYWVHRTLHTNKFLYKYVHALHHKYNSAATLSPWASIAFNPLDGIAQASPYVVAMFLVPCHYITHLLMLFFTGIWSTNIHDAVPGNIEPIMGAKYHTV 304
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A6V1TBS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TBS5_HETAK) HSP 1 Score: 202 bits (514), Expect = 1.880e-62 Identity = 88/127 (69.29%), Postives = 108/127 (85.04%), Query Frame = 1
Query: 1 RCYFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
R Y++L+DVGG GY+ +T+VY+A VEIGIYWMHR LHTNKFLYK+VHALHHKYN TL+PWASIAFNPLDG LQACPY+I FF+PCHY TH+ + FTA+WATNIHD + G++EP+MG+KYH +
Sbjct: 149 RVYYSLADVGGLGGYLFFTAVYIAFVEIGIYWMHRVLHTNKFLYKHVHALHHKYNKPSTLTPWASIAFNPLDGLLQACPYLIATFFVPCHYLTHLILLFFTALWATNIHDTLNGDSEPIMGSKYHLI 275
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A7S2UWH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWH0_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.060e-61 Identity = 90/127 (70.87%), Postives = 102/127 (80.31%), Query Frame = 1
Query: 1 RCYFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
R Y+++SDVGGW Y Y + YL VE GIYW+HRTLHTNKFLYK+VHALHHKYN TLSPWASIAFNP+DG QA PYV LF IPCHY+TH+AM FT +WATNIHD + GNTEPVMG+KYH V
Sbjct: 163 RVYYSMSDVGGWQWYAAYMAAYLLFVEFGIYWVHRTLHTNKFLYKHVHALHHKYNKPTTLSPWASIAFNPVDGVAQASPYVAGLFLIPCHYFTHLAMLFFTGVWATNIHDTLHGNTEPVMGSKYHLV 289
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A6U4L1I3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L1I3_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.680e-61 Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 1
Query: 7 YFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
YF + D+GGW Y+ T+ Y A VEIGIYWMHRTLHTNKFLYK+VH LHHKYN+ TLSPWASIAFNPLDG QA PYV + F+PCHY TH+ M FT IWATNIHDA+ G+TEP+MGAKYHT+
Sbjct: 188 YFYIDDIGGWANYLAITAFYFALVEIGIYWMHRTLHTNKFLYKWVHGLHHKYNSHATLSPWASIAFNPLDGIAQASPYVFVMLFVPCHYLTHLIMLFFTGIWATNIHDAIDGDTEPIMGAKYHTI 312
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Match: A0A482SVV9_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVV9_9ARCH) HSP 1 Score: 198 bits (504), Expect = 4.450e-61 Identity = 85/125 (68.00%), Postives = 104/125 (83.20%), Query Frame = 1
Query: 7 YFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALHHKYNTAETLSPWASIAFNPLDGCLQACPYVICLFFIPCHYYTHMAMFAFTAIWATNIHDAVAGNTEPVMGAKYHTV 381
YF +SD+GGW Y Y +Y+ VEIG+YWMHRTLHTNKFLYKYVH LHHKYN TL+PWASIAFNPLDG LQA PYV+CLFF+P HY+TH+ + F+ +WATNIHDA+ G++EP+MG+KYHT+
Sbjct: 151 YFYVSDIGGWGWYTAYLVLYITLVEIGVYWMHRTLHTNKFLYKYVHGLHHKYNKLTTLTPWASIAFNPLDGILQASPYVVCLFFVPVHYFTHIFLLFFSGVWATNIHDAMWGDSEPIMGSKYHTL 275 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9768.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig9768.1.1 >prot_L-digitata_M_contig9768.1.1 ID=prot_L-digitata_M_contig9768.1.1|Name=mRNA_L-digitata_M_contig9768.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=131bp RCYFNLSDVGGWVGYVVYTSVYLACVEIGIYWMHRTLHTNKFLYKYVHALback to top mRNA from alignment at L-digitata_M_contig9768:695..2605+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig9768.1.1 ID=mRNA_L-digitata_M_contig9768.1.1|Name=mRNA_L-digitata_M_contig9768.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=1911bp|location=Sequence derived from alignment at L-digitata_M_contig9768:695..2605+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig9768:695..2605+ >mRNA_L-digitata_M_contig9768.1.1 ID=mRNA_L-digitata_M_contig9768.1.1|Name=mRNA_L-digitata_M_contig9768.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=393bp|location=Sequence derived from alignment at L-digitata_M_contig9768:695..2605+ (Laminaria digitata LdigPH10_18mv male)back to top |