mRNA_L-digitata_M_contig102563.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: UPI001BB6CEB4 (PIG-L family deacetylase n=1 Tax=Akkermansiaceae bacterium TaxID=2562705 RepID=UPI001BB6CEB4) HSP 1 Score: 461 bits (1185), Expect = 1.370e-162 Identity = 219/263 (83.27%), Postives = 239/263 (90.87%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M + P A FIPD PETEALARTTHLGIGAHQDDLEFMAFHGILEC+A+ ++WFGGVTCTNGAGSS PYA FTDEDMM IRVQEQ TAAL+G+YGSM+QLDYPSSAVK ATDPSLK+DL+ ILEATRPEVVYTHNPADKHDTHIGVT+AAL AMRE+PA RP+KV+GCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSH+TD + QLIFGIDLTPL+TD SKDI+ ++
Sbjct: 1 MNFHQPNAQTFIPDCAPETEALARTTHLGIGAHQDDLEFMAFHGILECYARTDRWFGGVTCTNGAGSSAPVPYAKFTDEDMMKIRVQEQKTAALVGQYGSMIQLDYPSSAVKGATDPSLKDDLRKILEATRPEVVYTHNPADKHDTHIGVTIAALHAMREMPAAGRPRKVVGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHATDQSGQLIFGIDLTPLVTDESKDIITFI 263
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A7V4IEG6_9BACT (PIG-L family deacetylase n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7V4IEG6_9BACT) HSP 1 Score: 427 bits (1098), Expect = 2.440e-149 Identity = 200/263 (76.05%), Postives = 229/263 (87.07%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M+L+ PTA+I+IPD P AL R THLGIGAHQDDLEFMAFHGIL+CF K ++WFGGVTCTNG+GS+RTGPYA +TD MM +R QEQ TAAL+G+Y +M+QLDYPSSAVKSATDP+L+NDL+ IL RPEVVYTHNPADKHDTHIGV VAAL+AMR +P DQRP+ V+GCEVWRNLDWLPD +K LMDVSGRDNLAAALNGVFDSQIAGGKRYDLAT GRRAANATFF+SH+TD T QLIFG+DL PL+ D S DI++YV
Sbjct: 1 MKLHQPTADIYIPDGQPLPTALQRVTHLGIGAHQDDLEFMAFHGILQCFGKPDRWFGGVTCTNGSGSARTGPYASYTDAQMMTVRKQEQRTAALLGQYAAMIQLDYPSSAVKSATDPALQNDLREILAVMRPEVVYTHNPADKHDTHIGVVVAALQAMRALPRDQRPRTVVGCEVWRNLDWLPDAKKFLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATQGRRAANATFFESHATDKTTQLIFGMDLAPLVADESLDILDYV 263
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A3C1VHD2_9BACT (PIG-L family deacetylase n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A3C1VHD2_9BACT) HSP 1 Score: 422 bits (1085), Expect = 2.330e-147 Identity = 202/263 (76.81%), Postives = 224/263 (85.17%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M+L+ TA IF+PD P EAL R THLG+GAH DDLEFMAFHGILECFA + KWFGGVTCTNGAGSSRTG Y +TD MM +R EQNTAA IG+YG M QLDY SSA+KS TD +LKNDLK IL ATRPEVVYTHNPADKHDTHIGV +AAL AMRE+P DQRPKKVIGCEVWR+LDWL D EKVLMDVSG DNLAAALNGVFDSQIAGGKRYDLATLGRRA N+TFF+SH+TD NQLIFG+DLTP++ D +KDI+E+V
Sbjct: 1 MKLHQSTAQIFVPDGKPVAEALKRITHLGVGAHHDDLEFMAFHGILECFASETKWFGGVTCTNGAGSSRTGAYEEYTDAQMMGVRRTEQNTAATIGQYGVMFQLDYSSSAIKSPTDLTLKNDLKEILVATRPEVVYTHNPADKHDTHIGVVIAALLAMRELPRDQRPKKVIGCEVWRSLDWLSDAEKVLMDVSGHDNLAAALNGVFDSQIAGGKRYDLATLGRRAGNSTFFESHATDKANQLIFGMDLTPVVADETKDILEFV 263
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: UPI00190E148A (PIG-L family deacetylase n=1 Tax=Luteolibacter yonseiensis TaxID=1144680 RepID=UPI00190E148A) HSP 1 Score: 419 bits (1077), Expect = 3.850e-146 Identity = 199/263 (75.67%), Postives = 231/263 (87.83%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M+ + P A +FIPD +PE EAL RTTHLGIGAHQDDLEFMAFHGIL CFA+ ++WFGGVTCTNGAGSSRTGPYA F+D++MM+IR QEQNTAA+IG Y +M+QLD+PSS VKSAT+ LKNDLK IL ATRP+VVYTHN ADKHDTHIGV VAAL AMRE+P +QRPK+VIGCEVWR LDWL D +K+LMDVS RDNLAA+LNGVFDSQIAGGKRYDLATLGRRAANATFF+SH+TD + QLIFG+DLTPL+ D + D+ ++V
Sbjct: 1 MKFHQPNAELFIPDGSPEAEALRRTTHLGIGAHQDDLEFMAFHGILRCFARDDQWFGGVTCTNGAGSSRTGPYAGFSDQEMMSIRRQEQNTAAVIGGYSAMIQLDHPSSVVKSATEQGLKNDLKEILAATRPDVVYTHNLADKHDTHIGVAVAALLAMRELPREQRPKQVIGCEVWRGLDWLSDEDKLLMDVSNRDNLAASLNGVFDSQIAGGKRYDLATLGRRAANATFFNSHATDASTQLIFGMDLTPLVEDDTLDVADHV 263
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A4Q2X7A4_9BACT (PIG-L family deacetylase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2X7A4_9BACT) HSP 1 Score: 403 bits (1036), Expect = 6.710e-140 Identity = 195/263 (74.14%), Postives = 218/263 (82.89%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M + +A +F+PD P EA+ R THLGIGAHQDDLEFMAFHGILEC + ++WFGGVTCTNGAGSSRTGPY FTD +MM +R QEQ+TAA+IG YG M+QLD+PSSAVKSATD SL DL+ I ATRPEVVYTHNPADKHDTHIGVTVA L+AMR++P +RP KVIGCEVWR LDWL D KVLMDV GRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTD + QLI+G+DLTPLI DI +V
Sbjct: 1 MNFFHKSARVFVPDDIPAEEAVRRVTHLGIGAHQDDLEFMAFHGILECLGRDDRWFGGVTCTNGAGSSRTGPYERFTDVEMMAVRRQEQDTAAVIGGYGVMIQLDHPSSAVKSATDSSLVGDLRKIFSATRPEVVYTHNPADKHDTHIGVTVAVLQAMRDLPPAERPGKVIGCEVWRGLDWLADNAKVLMDVGGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDASTQLIYGMDLTPLINGEVADIAGFV 263
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A7C5K5Y2_9BACT (PIG-L family deacetylase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7C5K5Y2_9BACT) HSP 1 Score: 390 bits (1001), Expect = 2.100e-134 Identity = 183/263 (69.58%), Postives = 213/263 (80.99%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M+L+N TA IF+PD P AL R THLGIGAHQDDLEFMAFHGIL C+ WFGGVTCTNG GS+RTGPYA FTD MM +R +EQN AA++G YG M+QLDYPS VK A +L++DL+ IL ATRPE+VYTHNPADKHDTH+GV VAAL+A+R +P QRP +V GCE+WRNLDWLPD EKV+MDVS NLAAALNGVFDSQIAGGKRYD+AT GRR ANATFF+SH+TD QLIFG+DLTPL+ D ++DIV +V
Sbjct: 1 MKLHNETAEIFVPDGRPVDAALRRITHLGIGAHQDDLEFMAFHGILACYDSDRHWFGGVTCTNGGGSARTGPYAKFTDAQMMAVRRREQNAAAVVGRYGVMIQLDYPSREVKCAAATALRDDLRAILAATRPEIVYTHNPADKHDTHVGVVVAALQALRALPRAQRPARVWGCEIWRNLDWLPDAEKVVMDVSAHPNLAAALNGVFDSQIAGGKRYDVATQGRRQANATFFESHATDQATQLIFGMDLTPLVADETRDIVAHV 263
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A7C5QYY4_9BACT (PIG-L family deacetylase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7C5QYY4_9BACT) HSP 1 Score: 383 bits (983), Expect = 6.320e-132 Identity = 185/263 (70.34%), Postives = 211/263 (80.23%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M+L +P A IF P P R THLGIGAHQDDLEFMAFHGIL C+ E WFGGVTCTNGAGS+RTGPYA FTD +MM +R +EQN AA++G YG M+QL YPSS VKSATDPSLKNDLKTIL RP++VYTHNPADKHDTH+ V VA L+A+RE+ +QRP+K+ GCE+WR+LDWL D EKVLMDVS +NLAAALNGVFDSQIAGGKRYDLAT GRR ANATFF+SH+TD T IFG+DLTPL D S D+V YV
Sbjct: 1 MKLQSPNAEIFHPTGAPR-----RITHLGIGAHQDDLEFMAFHGILACYHSDELWFGGVTCTNGAGSARTGPYANFTDAEMMAVRRREQNAAAVLGRYGVMIQLGYPSSVVKSATDPSLKNDLKTILAELRPQIVYTHNPADKHDTHVAVVVATLQAIRELAPEQRPQKLWGCEIWRDLDWLSDDEKVLMDVSAHENLAAALNGVFDSQIAGGKRYDLATQGRRRANATFFESHATDKTTMQIFGMDLTPLAQDDSLDLVAYV 258
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A4P5QPY2_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5QPY2_9BACT) HSP 1 Score: 368 bits (945), Expect = 4.550e-126 Identity = 170/263 (64.64%), Postives = 207/263 (78.71%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEYV 789
M+ + PTA+IFIPD P +A AR THLGIGAHQDDLEFMAFHGIL+CF +WFGGVTCTNG+GS+RTG YA FTD +MM +R +EQ AA++G Y +M+QLDYPS K +DP L+ DL+ IL A +P VVYTHNPADKHDTH+ V V ++A+R++P D+RP+ V GCEVWR+LDWL D EK++ DVSG D+LAAALNG+FDSQIAGGKRYDLA +GRR ANATFF SH D ++ L F +DLTPL D S DI+EYV
Sbjct: 1 MKFHLPTADIFIPDGKPVADAFARITHLGIGAHQDDLEFMAFHGILQCFHSDTEWFGGVTCTNGSGSARTGSYADFTDAEMMAVRSEEQRQAAIVGRYAAMVQLDYPSGIAKDPSDPRLREDLRAILAAAQPRVVYTHNPADKHDTHVAVVVPVIQAIRDLPRDKRPQAVHGCEVWRDLDWLGDAEKIVHDVSGNDSLAAALNGIFDSQIAGGKRYDLAVMGRRRANATFFQSHGVDSSDALAFAMDLTPLAHDDSLDIIEYV 263
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A3E1EKH3_9BACT (N-acetylglucosaminyl deacetylase, LmbE family n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EKH3_9BACT) HSP 1 Score: 367 bits (943), Expect = 9.170e-126 Identity = 174/262 (66.41%), Postives = 208/262 (79.39%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEY 786
M+ TA +FIPD PE+EALAR THLG+GAHQDDLEFMA HGIL CF E+WFGGVTCTNG GSSR G YA F+DE+MM +R EQ TAA+ G YG+M+QLDYPSSAVKSA D L+ DL +L+ATRPE VYTHNPADKHDTH+GV VA ++A+R +PA +RP+ + GCE WRNLDW+ DGEKV+ DVSG +N+AAALNGVFDSQIAGGKRYDLA GRR ANATFF+SH++D + +DLTPL+ D DI+E+
Sbjct: 1 MDFQLTTARVFIPDGKPESEALARVTHLGVGAHQDDLEFMALHGILACFHGVERWFGGVTCTNGCGSSRIGDYAGFSDEEMMEVRRVEQETAAVTGRYGAMIQLDYPSSAVKSAEDGRLREDLVRVLKATRPEWVYTHNPADKHDTHLGVLVALVEAIRSLPAGERPRALYGCEGWRNLDWMDDGEKVVHDVSGHENIAAALNGVFDSQIAGGKRYDLAVAGRRRANATFFNSHASDTAALAEYAMDLTPLMVDDGLDILEF 262
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Match: A0A2V5MX23_9BACT (PIG-L family deacetylase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5MX23_9BACT) HSP 1 Score: 366 bits (939), Expect = 3.850e-125 Identity = 169/262 (64.50%), Postives = 207/262 (79.01%), Query Frame = 1
Query: 1 MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAKKEKWFGGVTCTNGAGSSRTGPYAIFTDEDMMNIRVQEQNTAALIGEYGSMLQLDYPSSAVKSATDPSLKNDLKTILEATRPEVVYTHNPADKHDTHIGVTVAALKAMREIPADQRPKKVIGCEVWRNLDWLPDGEKVLMDVSGRDNLAAALNGVFDSQIAGGKRYDLATLGRRAANATFFDSHSTDHTNQLIFGIDLTPLITDHSKDIVEY 786
M+ N PT++IFIPD AL RTTH+G+GAHQDDLE MA HGILECF + E+WF G+TCTNGAGSSR GPYA ++D+ M ++R +EQ TAA+IG+Y +MLQLDYPSS +K+ D SL DL I T+P VVYTHNPADKHDTH+ V V ++A+R++PA RPKKV GCEVWRNLDWLPD +KV +DVS R NLAAAL VFDSQIAGGKRYDLA+ GRR ANAT+F SH TD ++IF IDLTP++TD ++D+V+Y
Sbjct: 1 MKFNQPTSDIFIPDGASLETALGRTTHVGVGAHQDDLEIMALHGILECFGRPERWFTGITCTNGAGSSRAGPYASYSDQQMQDVRRREQRTAAVIGQYSAMLQLDYPSSVIKNPADKSLTGDLFGIFSRTKPAVVYTHNPADKHDTHLAVLVPTIEALRQLPATDRPKKVYGCEVWRNLDWLPDEDKVALDVSERQNLAAALICVFDSQIAGGKRYDLASQGRRRANATYFQSHQTDTAREVIFAIDLTPVVTDPTRDLVDY 262 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102563.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102563.1.1 >prot_L-digitata_M_contig102563.1.1 ID=prot_L-digitata_M_contig102563.1.1|Name=mRNA_L-digitata_M_contig102563.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=263bp MELNNPTANIFIPDSTPETEALARTTHLGIGAHQDDLEFMAFHGILECFAback to top mRNA from alignment at L-digitata_M_contig102563:116..904+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102563.1.1 ID=mRNA_L-digitata_M_contig102563.1.1|Name=mRNA_L-digitata_M_contig102563.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=789bp|location=Sequence derived from alignment at L-digitata_M_contig102563:116..904+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102563:116..904+ >mRNA_L-digitata_M_contig102563.1.1 ID=mRNA_L-digitata_M_contig102563.1.1|Name=mRNA_L-digitata_M_contig102563.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=789bp|location=Sequence derived from alignment at L-digitata_M_contig102563:116..904+ (Laminaria digitata LdigPH10_18mv male)back to top |