mRNA_L-digitata_M_contig10253.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig10253.1.1
Unique NamemRNA_L-digitata_M_contig10253.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: D8LCM6_ECTSI (Methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM6_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 1.740e-60
Identity = 99/136 (72.79%), Postives = 117/136 (86.03%), Query Frame = 1
Query:    1 QVRLKELGSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIWERHEDSIYQRMAAVLETLSPG 408
            +V+ KE G   VLDVASAGGEPAITIAK +P ATVHATD APAM+DLIR+RAAE GVSNV A+VADGE+L GFGDGSVDAVTCTWGL+FMP+W+RA+QEFSRVL+ DG+V + +WER E S++QRM  V+ETL PG
Sbjct:  103 KVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAAEEGVSNVVASVADGEALTGFGDGSVDAVTCTWGLLFMPNWQRAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPG 238          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: A0A6H5JCB5_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCB5_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.030e-37
Identity = 80/144 (55.56%), Postives = 97/144 (67.36%), Query Frame = 1
Query:    1 QVRLKELGSATVLDVASAGGEPAITIAKV--------LPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIWERHEDSIYQRMAAVLETLSPG 408
            +V+ KE     VLDVASAGGEPAITIAK         +P AT+HATD AP M+DLIR+RA E GVSNV A+VADGE+L GFGD +VDAVTCTWGL+FMP+W+RA+QE                     S++QR+  V+ETL PG
Sbjct:  102 KVQPKEPEKQVVLDVASAGGEPAITIAKAREGIYRKAMPGATIHATDFAPVMIDLIRKRAVEEGVSNVVASVADGEALTGFGDETVDAVTCTWGLLFMPNWQRAIQE--------------------GSVFQRIRNVVETLVPG 225          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: I0Z1C2_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1C2_COCSC)

HSP 1 Score: 110 bits (274), Expect = 9.470e-27
Identity = 60/129 (46.51%), Postives = 83/129 (64.34%), Query Frame = 1
Query:   22 GSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIW-ERHEDSIYQRMAAVLETLSP 405
            G+  +LDVAS  GEP I++AK+ P  TV  TDIA  M+   + RA    + N   AVADGE+L+ FGD + D VTC  GLMFMP+++RA+ EF RVL+ DGL M++ W E  + ++   M AV   ++P
Sbjct:   51 GNPQILDVASGTGEPGISLAKLFPGGTVTITDIAEGMIAGAKGRADRLSLKNARFAVADGENLSQFGDATFDVVTCNAGLMFMPNYERALAEFRRVLKPDGLAMVSAWGEEEQTNVASLMLAVQRAVAP 179          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: A0A835YPT1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT1_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.290e-26
Identity = 66/155 (42.58%), Postives = 96/155 (61.94%), Query Frame = 1
Query:   10 LKELGSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAA----EAGVSNVTAAVADGES-------------------LAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIWERHEDSIYQRMAAVLETLSP 405
            +K  G  +VLDVASA GEPA++IA++LP ATVHATD +P MV+ +  R A      G++NV   VADGES                   L+ F D S+DA+TC++G+MFMP W++A++EF RVL+ +G+ +I +W   +++  QR A +   L P
Sbjct:   70 IKGDGPPSVLDVASAAGEPAVSIARLLPQATVHATDYSPGMVEALNTRVAVLRETEGLANVHTGVADGESDILTLLCAVVAACICRAQNLSQFEDASMDAITCSFGIMFMPAWQKAIREFYRVLKPNGIAIINVWGPEQEA--QRCACIRLWLLP 222          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: A0A2P6TSJ3_CHLSO (Methyltransferase type 11 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSJ3_CHLSO)

HSP 1 Score: 108 bits (270), Expect = 4.460e-26
Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 1
Query:   10 LKELGSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIWERHE 357
            L+    A +LDVASA GEPA+T+A  LP A + +TD+A A ++L + RAA AG++NV+   AD E L  +GD S DAVTC+ GLMFMP ++ AV+EF+RVL+  GL   A+W+  +
Sbjct:   49 LQGKAGARILDVASASGEPALTLAVALPQAQLVSTDLAHAFLELGKSRAARAGLTNVSFETADAEDLHRYGDASFDAVTCSLGLMFMPSFELAVKEFARVLKPGGLFAAAVWQSED 164          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: A0A8J9RMN2_9CHLO (Probable ubiquinone/menaquinone biosynthesis C-methyltransferase Ub at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RMN2_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 6.020e-25
Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = 1
Query:   22 GSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIW 345
            GS  +LD+AS  GEP + +AK+ PD  V  TD+A  M+   +RRA   GV N + AVAD E L+ +GD + D VTC  GLMFMP+++RA+ EF RVL+  GL M+++W
Sbjct:   54 GSPQILDIASGSGEPGLQLAKLFPDGRVTMTDLAEGMIIEAKRRADLHGVKNASFAVADAEDLSHYGDATFDVVTCNCGLMFMPNYERALSEFRRVLKPGGLAMLSVW 161          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: A0A5J4Y136_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y136_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 1.750e-22
Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 1
Query:   34 VLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIW 345
            VLD+AS  G PA+ + + +P+A+V ATD++PA V LI   AA  GV+NVTA  AD + L  F D + DAVTC++GLMFMPD ++A+QE  RVL+  GL +  +W
Sbjct:  295 VLDLASNAGSPAVPLGQAIPNASVVATDLSPASVSLISEYAASEGVTNVTAQPADAQHLQEFDDNTFDAVTCSYGLMFMPDHQKALQEAHRVLKLGGLYVATVW 398          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: I0Z1C3_COCSC (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1C3_COCSC)

HSP 1 Score: 94.0 bits (232), Expect = 6.410e-21
Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 1
Query:    7 RLKELGSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIW 345
            R +  G+  +LDVAS  GEP I++A+  P+ +V  TD+A  M+   + RA    V N +  VAD E L+ F D + D VTC  GLMFMP+++RA+ EF RVL+ DGL +++ W
Sbjct:   46 RAEVKGNPLILDVASGTGEPGISLARQFPNGSVIMTDLADGMIAGAKGRAERLSVKNASFDVADAEDLSQFKDATFDVVTCNCGLMFMPNYERALAEFRRVLKPDGLALMSAW 158          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: A0A2P6TIN7_CHLSO (Methyltransferase type 11 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TIN7_CHLSO)

HSP 1 Score: 92.0 bits (227), Expect = 7.410e-20
Identity = 53/111 (47.75%), Postives = 67/111 (60.36%), Query Frame = 1
Query:   10 LKELGSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAI 342
            L+    A +LDVASA GEPA ++A  LP ATVHATD+ P  V L   RA   G+ N+   VAD E L  F D S DAV C  GLMF+P+   A+  F RVL+  G ++I +
Sbjct:   30 LRGRADAQILDVASASGEPAASLAAALPLATVHATDLTPRFVQLGAARAQRLGLRNMRCQVADAERLEPFADASCDAVCCCMGLMFIPNVAAALAAFDRVLKPGGALVITV 140          
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Match: A0A154VU84_9PROT (Uncharacterized protein n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154VU84_9PROT)

HSP 1 Score: 90.5 bits (223), Expect = 2.960e-19
Identity = 60/127 (47.24%), Postives = 78/127 (61.42%), Query Frame = 1
Query:   34 VLDVASAGGEPAITIAK-VLPDATVHATDIAPAMVDLIRRRAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEFSRVLRSDGLVMIAIWERHEDSIY--QRMAAVLETLSP 405
            VLD+AS  GEPA++ AK V P   V ATD+APAM+  IRRRA  AG+SN+   +AD E+L  F D S D VTC +GLMF PD  +A++E  RVL+  G     +W    D+      + A +ETL P
Sbjct:   54 VLDLASGAGEPALSAAKRVGPGGQVLATDLAPAMMAGIRRRAKAAGLSNIGFEIADAEALP-FPDASFDRVTCRFGLMFFPDPLKALRESLRVLKPGGRAAFMVWGPLADNALFAVTLEAAIETLIP 179          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10253.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCM6_ECTSI1.740e-6072.79Methyltransferase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JCB5_9PHAE1.030e-3755.56Methyltransf_11 domain-containing protein n=1 Tax=... [more]
I0Z1C2_COCSC9.470e-2746.51S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A835YPT1_9STRA1.290e-2642.58S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A2P6TSJ3_CHLSO4.460e-2650.00Methyltransferase type 11 n=1 Tax=Chlorella soroki... [more]
A0A8J9RMN2_9CHLO6.020e-2549.07Probable ubiquinone/menaquinone biosynthesis C-met... [more]
A0A5J4Y136_9CHLO1.750e-2250.96Methyltransf_11 domain-containing protein n=1 Tax=... [more]
I0Z1C3_COCSC6.410e-2144.25S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A2P6TIN7_CHLSO7.410e-2047.75Methyltransferase type 11 n=1 Tax=Chlorella soroki... [more]
A0A154VU84_9PROT2.960e-1947.24Uncharacterized protein n=1 Tax=Oceanibaculum paci... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10253contigL-digitata_M_contig10253:199..3136 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LCM6
PFAMsMethyltransf_25
Model size408
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.86e-61
EggNOG OGs2CZJF@1|root,2SANJ@2759|Eukaryota
Ec32 ortholog descriptionMethyltransferase type 11
Ec32 orthologEc-03_002320.1
DescriptionubiE/COQ5 methyltransferase family
Cds size408
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406630.3998702-CDS-L-digitata_M_contig10253:198..3121682406630.3998702-CDS-L-digitata_M_contig10253:198..312Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10253 199..312 -
1682406630.4117026-CDS-L-digitata_M_contig10253:1184..13321682406630.4117026-CDS-L-digitata_M_contig10253:1184..1332Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10253 1185..1332 -
1682406630.426396-CDS-L-digitata_M_contig10253:1779..18411682406630.426396-CDS-L-digitata_M_contig10253:1779..1841Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10253 1780..1841 -
1682406630.4445682-CDS-L-digitata_M_contig10253:3052..31361682406630.4445682-CDS-L-digitata_M_contig10253:3052..3136Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10253 3053..3136 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10253.1.1prot_L-digitata_M_contig10253.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig10253 199..3136 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig10253.1.1

>prot_L-digitata_M_contig10253.1.1 ID=prot_L-digitata_M_contig10253.1.1|Name=mRNA_L-digitata_M_contig10253.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=136bp
QVRLKELGSATVLDVASAGGEPAITIAKVLPDATVHATDIAPAMVDLIRR
RAAEAGVSNVTAAVADGESLAGFGDGSVDAVTCTWGLMFMPDWKRAVQEF
SRVLRSDGLVMIAIWERHEDSIYQRMAAVLETLSPG
back to top

mRNA from alignment at L-digitata_M_contig10253:199..3136-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig10253.1.1 ID=mRNA_L-digitata_M_contig10253.1.1|Name=mRNA_L-digitata_M_contig10253.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=2938bp|location=Sequence derived from alignment at L-digitata_M_contig10253:199..3136- (Laminaria digitata LdigPH10_18mv male)
CAGGTGCGGCTGAAAGAGCTGGGGTCGGCGACCGTTTTAGACGTCGCCTC CGCCGGTGGAGAACCCGCCATCACTATCGCTAAGGTGCTAAAGATGCGAA CTTGGTCGTGGTTGTGGAGACGTTTTTTTGTTTTCCCCTCTTATTGTCTT GTCTCGGCGACCCATGTGCACCGAGTTAAGGGCACCCCGTGACAAGCCGA AACAAGCGCTCGTAACTAAGCATTGCTCTTATCTGTAGTGGGCAATGCAT AGCTGTTTAGTCCAGGCGGAACATGCCGATTTGAACGCTCTTAAGTCCCG AATTATCTTGTCATGGGGTGCTCTTAACTCGGGGTACCCAGGCCGACTGT TGCGTCCCGTCTGTAAGAACTTTTTCCTAGACCCCTCCCGAAACGCGCGT GAGGGATGGTAGAACTTATTAGCAGAGGTCAGTCGGCAATACCCAATGAA CGCTGCCACGGGCTAACATCAGACGATGGCGCAGTTGCGTTCGCCGACAG GGGGCCGGTGGGAAACACCCCCTTCTGCGCCGCGGCCACGACCTCTTGGC GTGTCTACTCCGACCCCGCTTCGAGGTTCCCTCTGTTAGTTACGACACAT AATTTGTTAGTTGTACAGCACCACCCTCTATACCACTCAGTCACGTGACT TAGTGACCTAGAAGGTAGTGCTATATAGCTAACACCCTTCCTGGAAGTAA CGTCTCAGAAAGGCAATGTGCGGGACAGACAACCTCCGCTTGGGCCTGGG CCTACCGTCTAATACACAGGATAGCGCACCACTGGGACAAATTCGGAGCC GATTTTGTTCAAAACCAAGGGAGGCGCACACAACGAAAATGGCGGTTGTG GAAAGATCTCGAATGAGATCTTTTCGTTCGATGCTTCGCTCGGCGTTTGC GCTGTCGTCGTTGTCTATGACCTCTTCTTGGAAATGCGTCCGAGGGGGGG GGGTGTTGTGCGTTTCCTGCCTAAAGATTTTGTCGACTCGATAGATCATC TGGCTGCGGCCTGCGTGCTGCACCGTGTGGCATCTGCTTGTCGTACCACC CGGTAGGAACCGAACACCGCTCGTGCGCGTAGAAAATAACTTTACAGCGG GAAGATAAACGACATAAAAGACAACCTCTTTTCTTACCGTACAACCTGGG AATAGTCGCCGCCCAGACTTTTACGAAACTCAAGCGTTTATGCGGGCAAC AAACCCAGCGAATACCCTCGGCGTGCAACCGCATATAATAATGCTGTCCT CATTTTTCGCTGTCCCCTCCGCACCGACCCATAAACGCCTCCCAGGTACT GCCGGATGCGACGGTACACGCCACCGACATCGCTCCGGCAATGGTCGATC TAATCAGGTGTGCCTCAACGGAGCATGTGTCTCGCCAGAATGCCATTCGG AAGCCACGCACCTCGAGATGACCGAGCCATCATTTATTTAATTCTCCTTG ATCATTTTGTCTGACTGAATCTCCCGCTGCTCGCGTGCGGTACGCTCCAT AACAATTATGCCCTGCCGCGCAACCCAAAACGTTGCACACATCGGACAGA TCAAGATCTACAGTAGATGATCTAGATCCTAGATTTACCGTTATGATATT TAGTGCTGGATCTGTGTAGTACATATCCAACCCAGGAACCATGTGCTAGA TCACGCAAATCACACAGCTCCCATCCGATAACATGATCTAGATCATGCAG ATAGTACAGATCATGGATCTGTCTATCTGCTTTCAAATCTCTAGATCATG AAAAGGGGGTCTGATGTGTTCGATGTGTGAAACAATGTGTCACCACGTCA CCAGGCGGCGAGCTGCTGAGGCCGGGGTTTCCAATGTCACGGCGGCTGTA GCTGACGGGGAATCGTTGGCGGGATTCGGGGACGGGTCGGTGGATGCGGT GACCTGTACCTGGGGACTGATGTTCATGCCGGACTGGAAGCGGGCGGTTC AGGTACTTCAAACGTTTGCGACGAGACGCGCCAGACAGTCCTGCCGCCGG TCCTTGTTGGTGGTGTTGGTGGTGTTGATGGTGTTGTTGCTCTTGTTGGT AGTTCTGTTGTTGGTGTTGGTGATGGTGGTGCTGTTGATGGTGTTGATGT TGGTGTGGTGTTGGTAGCGTTGATATTGGTGTAGTTGGTGTTGGTGTTGT TGGTGTTGTTATTTGTCGTTGTCGTTGTCGTTGTTGATGATGTTTTTTTA GTAGCCTGTACTCAGCTTTCGCTTTAGGTAGCTGCTCTCCGACGCTGACT TGTTGCTGTTGCATGTTTGAAATGGTGTAAAAACAAGCATTTTCGATATT TAAGATCGTGTTTCCATTAGCATCGGTCTTAGTGTTCGGTATTTTTTTGT TGTCGTTGTCGTTGTCGATGTTGTTGTTTTCAATAGCCTGTACTCGGCTT TCGGTTTAGGTAGCTGCTCTCCGATGCTGATTGCATATTCCAGAAGTTTG GTGGTCGGTAAGCGACGCTTCATCGTTGTATCGCCATTGCCCGCCTCCCC CCCGCCCCCCCAAGCGACAGCCCTGATGTGTACAGTGTAGGCACACGAAC AAGAAAGAGCCTAATAAGCACAAAAGGCTGACTTTTTGGAGGACGCTAAG AAAACTTGATCAAGAAAAATTGCTTAACGGCGAGCTCTACACTAAATCCT ACTGGTGTATGACAGCCTATGCTCAAGGTTGTTCAAGGATGGTGTCACTA TAAGGTTCTAAGGCTTGCTCATGTTAGGTGTTTCTTCTTGGCGGACCCAT ACTGTATCAACCTCTCCGGCGCGGCGTTTCTCACGCGTCTCTGTCGCCCG AATAAAAACTGTATCCCACGGCAGGAGTTTTCGCGCGTGCTGAGAAGCGA CGGGTTGGTGATGATAGCGATATGGGAGAGACACGAAGACTCCATCTACC AGCGGATGGCCGCCGTGCTGGAGACCCTCTCTCCAGGT
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig10253:199..3136-

>mRNA_L-digitata_M_contig10253.1.1 ID=mRNA_L-digitata_M_contig10253.1.1|Name=mRNA_L-digitata_M_contig10253.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=408bp|location=Sequence derived from alignment at L-digitata_M_contig10253:199..3136- (Laminaria digitata LdigPH10_18mv male)
CAGGTGCGGCTGAAAGAGCTGGGGTCGGCGACCGTTTTAGACGTCGCCTC
CGCCGGTGGAGAACCCGCCATCACTATCGCTAAGGTACTGCCGGATGCGA
CGGTACACGCCACCGACATCGCTCCGGCAATGGTCGATCTAATCAGGCGG
CGAGCTGCTGAGGCCGGGGTTTCCAATGTCACGGCGGCTGTAGCTGACGG
GGAATCGTTGGCGGGATTCGGGGACGGGTCGGTGGATGCGGTGACCTGTA
CCTGGGGACTGATGTTCATGCCGGACTGGAAGCGGGCGGTTCAGGAGTTT
TCGCGCGTGCTGAGAAGCGACGGGTTGGTGATGATAGCGATATGGGAGAG
ACACGAAGACTCCATCTACCAGCGGATGGCCGCCGTGCTGGAGACCCTCT
CTCCAGGT
back to top