mRNA_L-digitata_M_contig102488.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig102488.1.1
Unique NamemRNA_L-digitata_M_contig102488.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: A0A222E0F4_9RHOB (DNA helicase n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E0F4_9RHOB)

HSP 1 Score: 595 bits (1534), Expect = 3.950e-203
Identity = 302/303 (99.67%), Postives = 302/303 (99.67%), Query Frame = 1
Query:    1 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 909
            LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLA RVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT
Sbjct:  252 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLASRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 554          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: A0A6F8QEY7_9RHOB (DNA helicase n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A6F8QEY7_9RHOB)

HSP 1 Score: 488 bits (1257), Expect = 9.420e-162
Identity = 253/303 (83.50%), Postives = 266/303 (87.79%), Query Frame = 1
Query:    1 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 909
            L+ QL  IEAPD AGL  +Q ALLTQ GTIRKTLGTK  RA+A DLFEALDQLA RVEEA   Q +LAAA RD ALH FAG FLRDY+AEK RRGWLDFDDLITRARDLL DP VAEWVLYRLDGGIDHILVDEAQDTSP QWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRL RTDAPLV   L+YSFRSAEPILR+VDNTF GA+ASGFV D  H AFK+AMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTV LAQRIA FI+++I+  T
Sbjct:  252 LSGQLGAIEAPDRAGLAQVQAALLTQAGTIRKTLGTKGVRASAADLFEALDQLAARVEEALAMQRALAAADRDTALHGFAGAFLRDYDAEKQRRGWLDFDDLITRARDLLRDPGVAEWVLYRLDGGIDHILVDEAQDTSPEQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLARTDAPLVPASLDYSFRSAEPILRLVDNTFRGAEASGFVGDG-HLAFKEAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVQLAQRIAHFIKESIENGT 553          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: UPI001C9488E2 (double-strand break repair helicase AddA n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C9488E2)

HSP 1 Score: 486 bits (1251), Expect = 7.350e-161
Identity = 250/303 (82.51%), Postives = 267/303 (88.12%), Query Frame = 1
Query:    1 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 909
            LAD+LA I+APD  GL  +Q ALLTQ GTI KTLGT+K R +APDLFEALDQLA RVE++  TQ +L AA RDAALHAFA  FL +YE EK+RRGWLDFDDLITRARDLLSDP VAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGAR D+RRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFA RL  TDAPLV   L YSFRSAEPILR+VDNTF GA+ASGFV D  HRAFK+AMPGRVDLWPLV+KVGDE+DG WHEPVDRPSATHHTV LAQRIARFIRQTID +T
Sbjct:  252 LADKLAAIQAPDRTGLAQVQDALLTQAGTILKTLGTQKVRKDAPDLFEALDQLAARVEDSLATQRALVAATRDAALHAFAEVFLTEYEGEKLRRGWLDFDDLITRARDLLSDPGVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARTDIRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFARRLANTDAPLVPADLLYSFRSAEPILRLVDNTFRGAEASGFVGDG-HRAFKEAMPGRVDLWPLVEKVGDEDDGPWHEPVDRPSATHHTVKLAQRIARFIRQTIDNRT 553          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: A0A0P1H0F1_9RHOB (DNA helicase n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1H0F1_9RHOB)

HSP 1 Score: 472 bits (1215), Expect = 2.190e-155
Identity = 238/301 (79.07%), Postives = 261/301 (86.71%), Query Frame = 1
Query:    1 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDA 903
            LAD  A   APDAAGL ++Q ALLTQ+GTIRKTLGTKKPR NAPDLFE LDQLA RVE AR TQ+++ AA RD AL+AFA  F+  YEAEK+RRGWLDFDDLITRARDLLSDP VA+WVLYRLDGGIDHILVDEAQDTSPVQWQVIERLA EFT+GEGAR D+RRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFA+RL RT+ PL SM L+YSFRSA PIL +VD TF+GA+ASGF  DQ H AFKD MPGRVDLWPL+DKV D+EDG W EP+DR  +TH TVILAQRIARFIR+TIDA
Sbjct:  252 LADHFARFTAPDAAGLALMQEALLTQSGTIRKTLGTKKPRTNAPDLFEQLDQLAARVEAARQTQIAVRAARRDIALYAFAQHFVPAYEAEKLRRGWLDFDDLITRARDLLSDPKVADWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAHEFTSGEGARQDIRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFAERLARTETPLASMTLKYSFRSASPILSLVDATFEGAEASGFSADQTHAAFKDRMPGRVDLWPLIDKVDDDEDGDWFEPLDRVGSTHQTVILAQRIARFIRRTIDA 552          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: A0A238JQT5_9RHOB (DNA helicase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238JQT5_9RHOB)

HSP 1 Score: 452 bits (1163), Expect = 7.800e-148
Identity = 232/303 (76.57%), Postives = 255/303 (84.16%), Query Frame = 1
Query:    1 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 909
            LA++L ++  PD AGL +LQ A+LT+TGT+ K LGTKK R  AP  F+ LDQLA RVEE+   Q  L A  RD ALHAFA  FL  Y++EK RRGWLDFDDLITRARDLL+D  VAEWVLYRLDGGIDHILVDEAQDTSPVQWQVI+RLAQEFT+G+GARAD RRTIFVVGDKKQSIYSFQGADPSEFDRMR+DFA RL RTDAPLVSMGLEYSFRSAEPILR+VD TFDGAQ SGFV DQ HRAFK+ MPGRVDLWP+V+ V DEED  W EPVDRP A HHTV+LA RIARFIRQTI A+T
Sbjct:  251 LAEKLGLVTGPDIAGLGLLQDAVLTKTGTVLKRLGTKKSREAAPAAFDQLDQLAARVEESVEMQRRLDAVRRDIALHAFAEVFLAAYDSEKERRGWLDFDDLITRARDLLNDAGVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIDRLAQEFTSGQGARADTRRTIFVVGDKKQSIYSFQGADPSEFDRMREDFAARLARTDAPLVSMGLEYSFRSAEPILRLVDTTFDGAQESGFV-DQKHRAFKERMPGRVDLWPVVEPVKDEEDSPWDEPVDRPGARHHTVVLAARIARFIRQTIQART 552          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: UPI000EF51E6D (double-strand break repair helicase AddA n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF51E6D)

HSP 1 Score: 446 bits (1146), Expect = 3.300e-145
Identity = 226/296 (76.35%), Postives = 250/296 (84.46%), Query Frame = 1
Query:   13 LAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTID 900
            +A + A DAAGLD L+ ALLTQ GT+RKTLGTKK R + PDLF  LDQLA RVE AR T+++L A ARD ALH FA  FL  YE EK  RGWLDFDDLITRARDLLSDP VA+WVLYRLDGGIDHILVDEAQDTSPVQWQVIERLA EFT+GEGAR DVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFA+RL RT+ PL ++ L+YSFRSAEPIL +VD TF+GA  SGF PDQ H AFKD MPGRVDLWPLV+KV ++EDG W +PVDR S+THHTVILA+RIARFI+  ID
Sbjct:  255 MAQVTAHDAAGLDALEGALLTQAGTLRKTLGTKKLRGDHPDLFAQLDQLAARVEAARETRIALGAVARDEALHDFAQAFLPAYEHEKTLRGWLDFDDLITRARDLLSDPKVADWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAHEFTSGEGARQDVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFAERLTRTETPLAALTLKYSFRSAEPILSLVDATFEGAVESGFSPDQTHMAFKDRMPGRVDLWPLVEKVEEDEDGEWFQPVDRVSSTHHTVILARRIARFIKARID 550          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: A0A2T6AR95_9RHOB (DNA helicase n=1 Tax=Allosediminivita pacifica TaxID=1267769 RepID=A0A2T6AR95_9RHOB)

HSP 1 Score: 442 bits (1136), Expect = 6.490e-144
Identity = 221/299 (73.91%), Postives = 251/299 (83.95%), Query Frame = 1
Query:    1 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTI 897
            LAD+L     P  AGLD+L++ALLTQ+GTI KTLGTK  RANAP+ F+ LDQLA RVEEA+ T++ L AA RD ALHAFA  F+ +YEAEK RRGWLDFDDLITR +DLL +P VA+WVLYRLDGGIDHILVDEAQDTSP QW+VIERLA+EFTAGEGARAD RRTIFVVGDKKQSIYSFQGADPSEFDRMR++F +RL  TDAPL SM LEYSFRSAEPILR+VD TF+G + SGF PDQ H AFKD MPGRVDLWPLV+K  +EEDGAW++PVDR  + HH VILA RIARF+ + I
Sbjct:  252 LADKLKTFPGPTTAGLDLLESALLTQSGTILKTLGTKGARANAPEAFDQLDQLAARVEEAKQTKLCLQAADRDIALHAFAQSFIPEYEAEKTRRGWLDFDDLITRTQDLLENPGVADWVLYRLDGGIDHILVDEAQDTSPAQWKVIERLAREFTAGEGARADTRRTIFVVGDKKQSIYSFQGADPSEFDRMREEFRNRLRDTDAPLSSMELEYSFRSAEPILRLVDQTFEGREPSGFTPDQKHIAFKDQMPGRVDLWPLVEKTEEEEDGAWYDPVDRVGSRHHDVILANRIARFVGKAI 550          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: X6L1Y9_9RHOB (DNA helicase n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6L1Y9_9RHOB)

HSP 1 Score: 439 bits (1129), Expect = 9.070e-143
Identity = 226/303 (74.59%), Postives = 251/303 (82.84%), Query Frame = 1
Query:    1 LADQLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 909
            LA+ LA   APD AG   L+ ALLT  GTIRKTLGTK  R     LFE LDQLA RVE A   + +LA  ARD ALHAFA  FL++Y+AEK RRGWLDFDDLITRARDLLSDP VA+WVLYRLDGGIDHILVDEAQDTSPVQWQVIERLA EFT+GEGARA+VRRTIFVVGDKKQSIYSFQGADPSEFDRMR+DFADRL RTDAPLV M LE+SFRSAEPILR+VDNTF  A+ASGF  DQ HRAFK AMPGRVDLWP+V+ + +E+ G W EPVDR   TH TVILA+R+A+F+R+T+DA T
Sbjct:  253 LAEGLAACTAPDLAGFAALKGALLTDAGTIRKTLGTKGVRTAHGTLFEKLDQLAARVEGALEAERALACTARDIALHAFAQPFLKEYKAEKERRGWLDFDDLITRARDLLSDPKVADWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAHEFTSGEGARAEVRRTIFVVGDKKQSIYSFQGADPSEFDRMREDFADRLRRTDAPLVPMTLEFSFRSAEPILRLVDNTFMDAEASGFAADQKHRAFKAAMPGRVDLWPVVETIKEEKPGPWFEPVDRVGQTHATVILARRVAQFVRRTLDAGT 555          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: A0A2K8WBD3_9RHOB (DNA helicase n=2 Tax=Sagittula TaxID=58842 RepID=A0A2K8WBD3_9RHOB)

HSP 1 Score: 429 bits (1102), Expect = 8.070e-139
Identity = 223/296 (75.34%), Postives = 240/296 (81.08%), Query Frame = 1
Query:   22 IEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 909
            I+  D   L  L+   LTQ GTIRK   TK  R NAP+L EA DQLA RVE A  T+ +L AA RD AL AFA  F+  YE  KMRRGWLDFDDLITRARDLLSD  VA+WVLYRLDGGIDHILVDEAQDTSPVQW VIERLA+EFT+GEGAR D RRTIFVVGDKKQSIYSFQGADPSEFDRMR+DF +RL  TDAPL +M LEYSFRSAEPILRVVD+TFDGA ASGF PDQ HRAFK  MPGRVDLWP+VDK  D+EDG WH+P+DR  A HHTVILAQRIARFIRQTIDA T
Sbjct:  258 IKGHDTQALAALKQICLTQGGTIRKNFPTKATRKNAPELCEAFDQLADRVEGALETEKALTAADRDIALTAFAARFVPAYEEAKMRRGWLDFDDLITRARDLLSDERVADWVLYRLDGGIDHILVDEAQDTSPVQWDVIERLAREFTSGEGAR-DTRRTIFVVGDKKQSIYSFQGADPSEFDRMREDFRERLMNTDAPLNAMVLEYSFRSAEPILRVVDSTFDGADASGFSPDQKHRAFKSEMPGRVDLWPVVDKTRDDEDGPWHQPLDRKGARHHTVILAQRIARFIRQTIDAGT 552          
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Match: A0A238J635_9RHOB (DNA helicase n=1 Tax=Pelagimonas phthalicica TaxID=1037362 RepID=A0A238J635_9RHOB)

HSP 1 Score: 421 bits (1083), Expect = 5.430e-136
Identity = 217/300 (72.33%), Postives = 240/300 (80.00%), Query Frame = 1
Query:   10 QLAMIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARRVEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRARDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPLVSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDLWPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT 909
            +LA I+ PD   L +L+   LTQ GTIRK    KK R  A +  EA DQL  R+E +   + SL AA RD AL+AFA  FL  YEAEK RRGWLDFDDLITR RDLLS+  VA WVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFT+GEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRD+F DRL  TDAPL+SM LE+SFRSAEPILR+ DNTFDGA +SGF  DQ H AFK  MPGRVDLWPLVD+V D+ DG W+EP+DR  +THHTVILA RIA FI+ TIDA+T
Sbjct:  254 ELARIKQPDHEALRILRAVCLTQAGTIRKNFPAKKLRLAASETCEAFDQLMARLERSLDIEKSLIAAQRDIALYAFAKAFLPAYEAEKTRRGWLDFDDLITRTRDLLSNEGVAAWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTSGEGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDEFRDRLQNTDAPLISMTLEHSFRSAEPILRLADNTFDGAISSGFTADQKHIAFKGQMPGRVDLWPLVDEVKDDPDGNWYEPLDRVGSTHHTVILANRIAHFIKTTIDAET 553          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102488.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E0F4_9RHOB3.950e-20399.67DNA helicase n=4 Tax=Roseobacteraceae TaxID=285417... [more]
A0A6F8QEY7_9RHOB9.420e-16283.50DNA helicase n=7 Tax=Roseobacteraceae TaxID=285417... [more]
UPI001C9488E27.350e-16182.51double-strand break repair helicase AddA n=3 Tax=R... [more]
A0A0P1H0F1_9RHOB2.190e-15579.07DNA helicase n=1 Tax=Tropicibacter naphthalenivora... [more]
A0A238JQT5_9RHOB7.800e-14876.57DNA helicase n=1 Tax=Maliponia aquimaris TaxID=167... [more]
UPI000EF51E6D3.300e-14576.35double-strand break repair helicase AddA n=1 Tax=T... [more]
A0A2T6AR95_9RHOB6.490e-14473.91DNA helicase n=1 Tax=Allosediminivita pacifica Tax... [more]
X6L1Y9_9RHOB9.070e-14374.59DNA helicase n=1 Tax=Rhodobacteraceae bacterium PD... [more]
A0A2K8WBD3_9RHOB8.070e-13975.34DNA helicase n=2 Tax=Sagittula TaxID=58842 RepID=A... [more]
A0A238J635_9RHOB5.430e-13672.33DNA helicase n=1 Tax=Pelagimonas phthalicica TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102488contigL-digitata_M_contig102488:3..911 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog388399.SSE37_17730
Preferred nameaddA
PFAMsPDDEXK_1,UvrD-helicase,UvrD_C
Model size909
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K16898
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.45e-135
EggNOG OGsCOG1074@1|root,COG1074@2|Bacteria,1MUTF@1224|Proteobacteria,2TQJZ@28211|Alphaproteobacteria
EC3.6.4.12
DescriptionBelongs to the helicase family. UvrD subfamily
Cds size891
COG categoryL
BRITEko00000,ko01000,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406629.9870822-UTR-L-digitata_M_contig102488:2..201682406629.9870822-UTR-L-digitata_M_contig102488:2..20Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig102488 3..20 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406630.0028272-CDS-L-digitata_M_contig102488:20..9111682406630.0028272-CDS-L-digitata_M_contig102488:20..911Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig102488 21..911 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102488.1.1prot_L-digitata_M_contig102488.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig102488 21..911 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig102488.1.1

>prot_L-digitata_M_contig102488.1.1 ID=prot_L-digitata_M_contig102488.1.1|Name=mRNA_L-digitata_M_contig102488.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=297bp
MIEAPDAAGLDVLQTALLTQTGTIRKTLGTKKPRANAPDLFEALDQLARR
VEEARTTQMSLAAAARDAALHAFAGEFLRDYEAEKMRRGWLDFDDLITRA
RDLLSDPSVAEWVLYRLDGGIDHILVDEAQDTSPVQWQVIERLAQEFTAG
EGARADVRRTIFVVGDKKQSIYSFQGADPSEFDRMRDDFADRLHRTDAPL
VSMGLEYSFRSAEPILRVVDNTFDGAQASGFVPDQLHRAFKDAMPGRVDL
WPLVDKVGDEEDGAWHEPVDRPSATHHTVILAQRIARFIRQTIDAKT
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mRNA from alignment at L-digitata_M_contig102488:3..911+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig102488.1.1 ID=mRNA_L-digitata_M_contig102488.1.1|Name=mRNA_L-digitata_M_contig102488.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=909bp|location=Sequence derived from alignment at L-digitata_M_contig102488:3..911+ (Laminaria digitata LdigPH10_18mv male)
CTGGCCGACCAACTGGCGATGATCGAGGCCCCGGATGCCGCCGGGCTGGA CGTGCTGCAAACCGCGCTGCTGACGCAGACCGGCACAATCCGAAAAACGT TGGGCACCAAGAAACCGCGCGCCAACGCCCCCGACCTGTTTGAGGCGCTC GACCAGTTGGCACGCCGCGTCGAAGAGGCCCGCACCACGCAGATGTCGCT GGCCGCCGCTGCGCGGGACGCGGCGCTTCATGCCTTTGCCGGGGAATTCT TGCGCGACTATGAGGCCGAAAAGATGCGGCGCGGCTGGCTGGATTTCGAC GACCTGATCACCCGCGCCCGTGACCTGCTCAGCGATCCCAGTGTGGCGGA ATGGGTTCTTTACCGGCTGGATGGCGGCATCGACCATATTCTGGTCGATG AGGCACAGGACACCTCTCCGGTACAGTGGCAAGTGATCGAACGGCTGGCA CAAGAGTTTACCGCCGGTGAGGGCGCGCGCGCCGACGTGCGACGCACCAT CTTTGTGGTCGGAGACAAGAAGCAGTCGATCTATTCCTTTCAGGGGGCCG ATCCCTCCGAATTCGACCGGATGCGCGATGATTTTGCCGATAGGCTGCAC CGAACCGACGCGCCGCTGGTCTCGATGGGGCTGGAATACAGTTTTCGCTC TGCCGAGCCGATCCTTCGGGTGGTCGACAACACCTTTGACGGCGCGCAGG CGTCGGGCTTTGTCCCGGACCAATTGCACCGCGCTTTCAAGGATGCCATG CCGGGGCGGGTCGATCTGTGGCCGCTGGTCGACAAGGTTGGCGATGAAGA GGACGGCGCGTGGCACGAACCCGTCGACCGGCCCAGCGCTACGCATCATA CAGTCATTCTGGCCCAGCGTATCGCCCGGTTCATCCGCCAAACCATCGAC GCCAAGACA
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Coding sequence (CDS) from alignment at L-digitata_M_contig102488:3..911+

>mRNA_L-digitata_M_contig102488.1.1 ID=mRNA_L-digitata_M_contig102488.1.1|Name=mRNA_L-digitata_M_contig102488.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=891bp|location=Sequence derived from alignment at L-digitata_M_contig102488:3..911+ (Laminaria digitata LdigPH10_18mv male)
ATGATCGAGGCCCCGGATGCCGCCGGGCTGGACGTGCTGCAAACCGCGCT
GCTGACGCAGACCGGCACAATCCGAAAAACGTTGGGCACCAAGAAACCGC
GCGCCAACGCCCCCGACCTGTTTGAGGCGCTCGACCAGTTGGCACGCCGC
GTCGAAGAGGCCCGCACCACGCAGATGTCGCTGGCCGCCGCTGCGCGGGA
CGCGGCGCTTCATGCCTTTGCCGGGGAATTCTTGCGCGACTATGAGGCCG
AAAAGATGCGGCGCGGCTGGCTGGATTTCGACGACCTGATCACCCGCGCC
CGTGACCTGCTCAGCGATCCCAGTGTGGCGGAATGGGTTCTTTACCGGCT
GGATGGCGGCATCGACCATATTCTGGTCGATGAGGCACAGGACACCTCTC
CGGTACAGTGGCAAGTGATCGAACGGCTGGCACAAGAGTTTACCGCCGGT
GAGGGCGCGCGCGCCGACGTGCGACGCACCATCTTTGTGGTCGGAGACAA
GAAGCAGTCGATCTATTCCTTTCAGGGGGCCGATCCCTCCGAATTCGACC
GGATGCGCGATGATTTTGCCGATAGGCTGCACCGAACCGACGCGCCGCTG
GTCTCGATGGGGCTGGAATACAGTTTTCGCTCTGCCGAGCCGATCCTTCG
GGTGGTCGACAACACCTTTGACGGCGCGCAGGCGTCGGGCTTTGTCCCGG
ACCAATTGCACCGCGCTTTCAAGGATGCCATGCCGGGGCGGGTCGATCTG
TGGCCGCTGGTCGACAAGGTTGGCGATGAAGAGGACGGCGCGTGGCACGA
ACCCGTCGACCGGCCCAGCGCTACGCATCATACAGTCATTCTGGCCCAGC
GTATCGCCCGGTTCATCCGCCAAACCATCGACGCCAAGACA
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