mRNA_L-digitata_M_contig10237.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig10237.2.1
Unique NamemRNA_L-digitata_M_contig10237.2.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A6H5KQ82_9PHAE (4HBT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ82_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 1.700e-157
Identity = 254/351 (72.36%), Postives = 278/351 (79.20%), Query Frame = 1 
Query:  964 VLKVGFARSIGMYDGMLVTSVGQQGSSLEAVYTVPENICLPRETSGGDGGKAFLSCGATTAIFDEVSTLAMVIADKTYRPGVSISLSCQMFHPVRPGERVTFKSRGLKMGGRLGYGEASMYREDGKLAATGRHVKYLPMGRAWDLTATPLLFPVATKWMVRQHERWLKDPHRTKARRERRRHEIGDGGGIPTGEHLVDMFKLEHFERYEGGKATEEYFGDANLAQGQEEE-----EGEIRSAEAEVLITRRKCNYMPGTMHGGAIAVAAEEIARRCPPSPLPVDDASVLGNPSIQYMEVHYMSPIKRRAGLAAVSAAANTGINVTRVGLSEAGGTEGGVLCAEAVLLWGQK 2001
            V +VGFARS+G+YDGMLVTSVGQQGS LEAVYT+PENIC+   T GG GG   L CG TTA+FDEVSTLAM+IAD+T RPGVSISLSC MFHPV PGERVTFKSRGLKMG RLGYGEASMYREDGKLAA GRHVK+LPMGRAWDL+  P +FP A K   RQH +WL+DP R+K              GIPTGEHL+DMFKLE FER  GG   EEYFG A  +  Q EE     EG  RSAEAE L+TRR CNYMPGTMHGGAIAVAAEEI+RRCPP+P P+D   + GNP +QYMEVHYMSPIKRRAGLAAVSAA+  G NVTRVGLSEAGGTEGGVL AEAVLLW Q+
Sbjct:   27 VWQVGFARSLGVYDGMLVTSVGQQGSMLEAVYTIPENICVTGGTLGGGGG-CVLPCGVTTALFDEVSTLAMMIADRTCRPGVSISLSCHMFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLPMGRAWDLSTIPFVFPYARKLSERQHAQWLRDPERSK--------------GIPTGEHLLDMFKLEQFERV-GGGGDEEYFGGATSSGPQVEEQAGEVEGGFRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEISRRCPPAPFPMDAVPIPGNPRVQYMEVHYMSPIKRRAGLAAVSAASGIGKNVTRVGLSEAGGTEGGVLSAEAVLLWSQR 361
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: D7FYV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV9_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 4.650e-110
Identity = 187/262 (71.37%), Postives = 202/262 (77.10%), Query Frame = 1 
Query: 1231 MFHPVRPGERVTFKSRGLKMGGRLGYGEASMYREDGKLAATGRHVKYLPMGRAWDLTATPLLFPVATKWMVRQHERWLKDPHRTKARRERRRHEIGDGGGIPTGEHLVDMFKLEHFERYEGGKATEEYFGDANLAQGQEEE-----EGEIRSAEAEVLITRRKCNYMPGTMHGGAIAVAAEEIARRCPPSPLPVDDASVLGNPSIQYMEVHYMSPIKRRAGLAAVSAAANTGINVTRVGLSEAGGTEGGVLCAEAVLLWGQK 2001
            MFHPV PGERVTFKSRGLKMG RLGYGEASMYREDGKLAA GRHVK+LPMGRAWDL+  P +FP A K   RQH +WL+DP R+K              GIPTGEHL+DMFKLE FER  GG   E YFG A  +  Q EE     EG  RSAEAE L+TRR CNYMPGTMHGGAIAVAAEEIARRCPP+P P+D   + GNP +QYMEVHYMSPIKRRAGLAAVSAA+  G NVTRVGLSEAGGTEGGVL AEAVLLW Q+
Sbjct:    1 MFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLPMGRAWDLSTNPFVFPYARKMSERQHAQWLRDPERSK--------------GIPTGEHLLDMFKLEQFERV-GGGGDEAYFGVATSSDPQVEEQAGDDEGGFRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRCPPAPFPMDAVPIPGNPRVQYMEVHYMSPIKRRAGLAAVSAASEIGKNVTRVGLSEAGGTEGGVLSAEAVLLWSQR 247
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A836CMK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK8_9STRA)

HSP 1 Score: 114 bits (286), Expect = 3.260e-23
Identity = 94/272 (34.56%), Postives = 132/272 (48.53%), Query Frame = 1 
Query: 1192 TYRPGVSISLSCQMFHPVRPGERVTFKSRGLKMGGRLGYGEASMYRED-GKLAATGRHVKYLPMGRAWDLT-ATPLLFPVATKWMVRQHERWLKDPHRTKARRERRRHEIGDGGGIPTGEHLVDMFKLEHFERYEGGKATEEYFGDANLAQGQEEEEGEIRSAEAEVLITRRKCNYMPGTMHGGAIAVAAEEIARRCPPSPLPVDDASVLGNPS-IQYMEVHYMSPIKRRAGLAAVSAAANTGINVTRVGLSEAGGTEGGVLCAEAVLLWGQ 1998
            T+RPG++++L+ +MF   RPG+++  +SR  K G  LGY E     E  G L A GRHVKYLPMGR WDL   +PLL P+A     R   R + +P   K              G+P GE LV      + +     +A     G  + A G  ++ G      AE++IT +  N+M G+ HGGAI  AAE++A    P       A V G P+ IQ+ME  Y +  K+RA L     A          G S+     GG+  A + + WG+
Sbjct:  154 THRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHERDMTRRMANPMWMKXXXXXXXXXXXXXKGVPEGETLVQQVAPLNLQLDTTLEA-----GGEHGASGSAQQRGS-----AEIIITPQLFNFM-GSFHGGAICAAAEQMAAATAP-------AEVDGKPTWIQHMETQYFTAQKKRAALTGEYRAGGLA-----AGCSDVTFLSGGLKMAGSRMQWGE 402
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A4D9CYT7_9STRA (4HBT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYT7_9STRA)

HSP 1 Score: 108 bits (270), Expect = 9.820e-22
Identity = 79/272 (29.04%), Postives = 128/272 (47.06%), Query Frame = 1 
Query:  973 VGFARSIGMYDGMLVTSVGQQGSSLEAVYTVPENICLPRETSGGDGGKAFLSCGATTAIFDEVSTLAMVIADKTYRPGVSISLSCQMFHPVRPGERVTFKSRGLKMGGRLGYGEASMY-REDGKLAATGRHVKYLPMGRA--WDLTATPLLFPVATKWMVRQHERWLKDPHRTKARRERRRHEIGDGGGIPTGEHLVDMFKLEHFERYEGGKATEEYFGDANLAQGQEEEEGE----IRSAEAEVLITRRKCNYMPGTMHGGAIAVAAEEIA 1767
            + FA ++ + D +L     ++G  LE  + + + +C        D G  +LS G  TA+FDE+ST A ++ D+T+RPGVS++L  ++   V PG  +  K+   K+G  L +    +      +L A G+H KYLPM     W++  TPLL+P+  K ++    R +                 G+         + D F L+                  NL  G E ++G+    +++  A + +  R CN +   MHGGA+AVAAEEIA
Sbjct:   30 INFAHTLQVSDAVLERYDAKKG--LETTHEITKYLCRT------DEGGTYLSAGVITAVFDEISTAACILQDRTHRPGVSVALDVEVMANVTPGRTLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWNMAFTPLLYPIVRKSLLGLTRRHVA---------------TGERVNTQDASSIFDHFPLD------------------NLTPGNESDKGDERQRLQATRASLHVKPRHCNGL-FKMHGGALAVAAEEIA 259
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A7S3H750_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H750_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.660e-21
Identity = 86/258 (33.33%), Postives = 122/258 (47.29%), Query Frame = 1 
Query: 1057 YTVPENICLPRETSGGDGGKAFLSCGATTAIFDEVSTLAMVIADKTYRPGVSISLSCQMFHPVRPGERVTFKSRGLKMGGRLGYGEASMYREDGKLAATGRHVKYLPMGRAWDLTATPLLFPVATKWMVRQHERWLKDPHRTKARRERRRHEIGDGGGIPTGEHLVDMFKLEHFERYEGGKATEEYFGDANLAQGQEEEEGE----IRSAEAEVL-----------------ITRRK--CNYMPGTMHGGAIAVAAEE 1761
            Y VPEN+C     +G DG   F S GA  A FDE+ST A ++ DKT+RPG+S+ LS ++   V  G+ VTF +   K+G  LG+    M    G+L A G+H++YL MG ++DL   P   P    W ++ +E +        A         G+  G   GEH+    K  HF   +G     E  G   L +    E  +    +RSAE  +L                 +T R   CN + G+MHGGA+A A E+
Sbjct:   46 YIVPENLCRKHHRAGKDGEAQF-SSGAIMAAFDEISTYATIMQDKTHRPGLSLHLSTEIIKNVNAGDEVTFLTHADKLGKTLGFCSMEMLNSKGELVARGKHIRYLQMGFSFDLITKPWALP----WALKFYETFYGKKTDAMAT-------TGETAG--KGEHIFR--KPLHFPELDGLGRVFELLG---LTKVDPTETAQALPAVRSAEDSLLYCSEDGRADPAQVAVYGLTVRPIVCNML-GSMHGGAVACAVEQ 283
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A482STT1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STT1_9ARCH)

HSP 1 Score: 94.0 bits (232), Expect = 6.910e-17
Identity = 79/304 (25.99%), Postives = 130/304 (42.76%), Query Frame = 1 
Query:  964 VLKVGFARSIGMYDGMLVTSVGQQGSSLEAVYTVPENICLPRETSGGDGGKAFLSCGATTAIFDEVSTLAMVIADKTYRPGVSISLSCQMFHPVRPGERVTFKSRGLKMGGRLGYGEASMYREDGKLAATGRHVKYLPMGRAWDLTATPLLFPVATKWMVRQHERWLKDPHRTKARRERRRHEIGDGGGIPTGEHLVDMFKLEHFERYEGGKATEEYFGDANLAQGQEEEEGEIRSAEAEVLITRRKCNYMP---GTMHGGAIAVAAEEIARRCPPSPLPVDDASVLGNPSIQYMEVHYMSPIK 1866
            +L+     S G +    +  V +    L   Y VP ++C  +++      K  +S  A  A+FDE+ST A+++ DK YR GVS+ L+ ++  P    E V   +   K+G  LG+    M  ++G L A G+H+K+LPMG  WDL + P + P+A  +                       +++  G    T    + +FK    E  +  K     F   +L      E     + E +     R  ++M    G MHGGA A   EE       +    +  +V     ++ MEV Y+SP++
Sbjct:   14 ILRESIHSSFGKFLLSPLKQVNKIPKGLAFHYKVPPSLCRIQKS------KPVISNAAVLALFDELSTDALIVTDKNYRGGVSVHLTTELIKPASLNEDVVIHTTADKIGKVLGFCSMEMRSKEGTLLAKGKHIKFLPMGWLWDLVSHPAILPIALYF-----------------------YQLFRGKKFKTDVDEI-LFKPRVVEDNKDEKEIASVFSALSL------EPSSSDNNEKDSYYKVRVKSFMKNRLGAMHGGAAAAVIEEACEVYLNTYRAAEQQNVEKKLYVEKMEVRYLSPMR 281
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A0L0FWG3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FWG3_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 1.560e-7
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 1 
Query: 1177 VIADKTYRPGVSISLSCQMF---HPVRPGERVTFKSRGLKMGGRLGYGEASMYR---------------EDGKLAATGRHVKYLPMGRAWDLTATPLLFPVATKWMVRQHE 1455
            +I DK +RPG S++L          V+PG++V  +SR  K+G  + + +  +YR                + ++ ATGRH KYL MG+AWD+   PLL   A K+  R  E
Sbjct:    1 MIKDKQHRPGQSLNLEINRMPALQSVQPGDKVYVRSRPRKVGKSVAFCDLELYRIPTPSSGTVDDSHVDSEREVLATGRHTKYLDMGKAWDVATHPLLISTARKYSQRYFE 111
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A7S3Q2W5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2W5_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 6.670e-6
Identity = 54/167 (32.34%), Postives = 77/167 (46.11%), Query Frame = 1 
Query:  982 ARSIGMYDG---MLVTSVGQQGSSLEAVYTVPENICLPR---------ETSGGDGGKAFLSCGATTAIFDEVSTLAMVIADKTYRPGVSISLSCQMF-----HPVRPGERVTFKSRGLKMGGRLGYGEA-SMYREDGKLAATGRHVKYL-------PMGRAWDLTAT 1407
            ARS  + D     +   V ++G  L   Y VPE+ C            E SG +  + F   G   A+FDE++TLA+V  D + RPGVS +LS ++      +  R GE +    R +K+G    + EA +   E GK+ A G+H KYL        M   W L  T
Sbjct:   48 ARSFLLKDSNPAYITVQVKEKGRYL-FTYKVPESACAKTLCYNTSASTEGSGSNDVRVFQLSGLL-ALFDELTTLAIVNEDDSARPGVSTTLSAELAPYGLNNLPRAGENIDVDVRVIKIGKNFSFLEAEAKIPESGKIIAIGKHTKYLGGISYLQSMALGWFLPVT 212
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BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A7S2UIG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIG7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.010e-5
Identity = 53/175 (30.29%), Postives = 81/175 (46.29%), Query Frame = 1 
Query:  976 GFARSIGMYDGMLVTSV------GQQGSSLEAVYTVPENICLPRETSGGDGGKAFLSCGATTAIFDEVSTLAMVIADKTYRPGVSISLSCQMF-----------HPVRPGERVTFKSRGLKMGGRLGYGEASMYR-EDGKLAATGRHVKYLPMGRAWDLTATPLLFPVATKWMVR 1446
            GF R++G     ++  +          S+L   YT+P +           GG+  LS     A+FDEV+T A+V  D+  RPG+SI+LS Q+              ++ G+ V   ++ +K G  L + EA       G +  TGRH KYLPM   ++L   PL FP+   +  R
Sbjct:   23 GFGRALGTDPTKVLHHLEDLVHYNDSSSTLTFKYTIPPHAVRR-------GGEMPLS--GFLAVFDEVTTWAIVAQDRKRRPGLSITLSAQVGPATTXXXXTARRGIQAGDTVQINAKVVKSGKVLAFTEAEAIDVTTGDVICTGRHTKYLPMPFLFELGLGPL-FPLVKMYTNR 187
[Close]
BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Match: A0A7S3V839_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V839_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.300e-5
Identity = 54/167 (32.34%), Postives = 77/167 (46.11%), Query Frame = 1 
Query:  982 ARSIGMYDG---MLVTSVGQQGSSLEAVYTVPENICLPR---------ETSGGDGGKAFLSCGATTAIFDEVSTLAMVIADKTYRPGVSISLSCQMF-----HPVRPGERVTFKSRGLKMGGRLGYGEA-SMYREDGKLAATGRHVKYL-------PMGRAWDLTAT 1407
            ARS  + D     +   V ++G  L   Y VPE+ C            E SG +  + F   G   A+FDE++TLA+V  D + RPGVS +LS ++      +  R GE +    R +K+G    + EA +   E GK+ A G+H KYL        M   W L  T
Sbjct:   48 ARSFLLKDSNPAYITVQVKEKGRYL-FTYKVPESACAKTLCYNTSASTEGSGSNDVRVFQLSGLL-ALFDELTTLAIVNEDDSARPGVSTTLSAELAPYGLNNLPRAGENIDVDVRVIKIGKNFSFLEAEAKIPESGKIIAIGKHTKYLGGISYLQSMALGWFLPVT 212
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10237.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KQ82_9PHAE1.700e-15772.364HBT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FYV9_ECTSI4.650e-11071.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMK8_9STRA3.260e-2334.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CYT7_9STRA9.820e-2229.044HBT domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S3H750_9STRA2.660e-2133.33Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482STT1_9ARCH6.910e-1725.99Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0L0FWG3_9EUKA1.560e-734.23Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S3Q2W5_9STRA6.670e-632.34Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2UIG7_9STRA1.010e-530.29Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S3V839_9STRA1.300e-532.34Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10237contigL-digitata_M_contig10237:1727..9306 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYV9
Model size3599
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.37e-120
EggNOG OGs2EY9U@1|root,2SZTY@2759|Eukaryota
Ec32 ortholog descriptionHotDog domain
Ec32 orthologEc-19_002660.1
Cds size1017
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10237.2.1prot_L-digitata_M_contig10237.2.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig10237 3313..7937 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406628.6988544-UTR-L-digitata_M_contig10237:1726..33121682406628.6988544-UTR-L-digitata_M_contig10237:1726..3312Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10237 1727..3312 -
1682406628.7494555-UTR-L-digitata_M_contig10237:7937..79611682406628.7494555-UTR-L-digitata_M_contig10237:7937..7961Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10237 7938..7961 -
1682406628.7585347-UTR-L-digitata_M_contig10237:8334..93061682406628.7585347-UTR-L-digitata_M_contig10237:8334..9306Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10237 8335..9306 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406628.708888-CDS-L-digitata_M_contig10237:3312..37981682406628.708888-CDS-L-digitata_M_contig10237:3312..3798Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10237 3313..3798 -
1682406628.7165334-CDS-L-digitata_M_contig10237:4535..47581682406628.7165334-CDS-L-digitata_M_contig10237:4535..4758Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10237 4536..4758 -
1682406628.7242615-CDS-L-digitata_M_contig10237:5648..56931682406628.7242615-CDS-L-digitata_M_contig10237:5648..5693Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10237 5649..5693 -
1682406628.731951-CDS-L-digitata_M_contig10237:6560..66611682406628.731951-CDS-L-digitata_M_contig10237:6560..6661Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10237 6561..6661 -
1682406628.7394216-CDS-L-digitata_M_contig10237:7775..79371682406628.7394216-CDS-L-digitata_M_contig10237:7775..7937Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10237 7776..7937 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig10237.2.1

>prot_L-digitata_M_contig10237.2.1 ID=prot_L-digitata_M_contig10237.2.1|Name=mRNA_L-digitata_M_contig10237.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=339bp
MYDGMLVTSVGQQGSSLEAVYTVPENICLPRETSGGDGGKAFLSCGATTA
IFDEVSTLAMVIADKTYRPGVSISLSCQMFHPVRPGERVTFKSRGLKMGG
RLGYGEASMYREDGKLAATGRHVKYLPMGRAWDLTATPLLFPVATKWMVR
QHERWLKDPHRTKARRERRRHEIGDGGGIPTGEHLVDMFKLEHFERYEGG
KATEEYFGDANLAQGQEEEEGEIRSAEAEVLITRRKCNYMPGTMHGGAIA
VAAEEIARRCPPSPLPVDDASVLGNPSIQYMEVHYMSPIKRRAGLAAVSA
AANTGINVTRVGLSEAGGTEGGVLCAEAVLLWGQKEGV*
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mRNA from alignment at L-digitata_M_contig10237:1727..9306-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig10237.2.1 ID=mRNA_L-digitata_M_contig10237.2.1|Name=mRNA_L-digitata_M_contig10237.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=7580bp|location=Sequence derived from alignment at L-digitata_M_contig10237:1727..9306- (Laminaria digitata LdigPH10_18mv male)
GTGGGAGCTCTGAGAGGCCAGATAAATACCGACCGAGGCCTGTCAGGAAG
AAAGACAGATGTAAGAATGTCTATGCTTGAATTATCGAAAAATATCACCG
AGGAAGCGGCCTTGTGCTCTGGGGGTGCCCCGTTTTTTCACCCGAGACTC
AATCATCCTGCTGGGTGAGCTGGGTTGTGTGCTACAAAAAAGCCAAGCCG
CCTATTCAAAGAGTGCACTACAGTATGCGAAACCACTTAAGAATCTCTTA
TTGTGGGCCAGGCTCGTATTCTTATGTAAGGCAGGGTGTGTTCAACACTA
ATTTCAGTATGAAAATGGCCACATTCTTACATTGGTCCAAATGTCGAGCC
TTAACTCCCACATTCTTAAGTGCTGTCGCGTACTGTACTACTGGACTGAC
AAAACCGGTGTTTGTCTTGATTTTTTCTGTTGAGTGTTTTTTTCTCCATC
CTATTTATTGTCCTCGTCCTACTCTCCCGCTCCCTCCCAGTAATAACTCG
GATCCGGGGTTACATAGCGGGCACTGCTCCCCCCTTTTTATCGCGAGAAG
AATTCAGCATTTTCTTCCCTCGTCGACTCGCGTCGAATTGCGCCTACCCA
CGCTGCTAGGCGCTCTCAGCAGTAGTTGAGATTGAACGCAGGCTATCGGA
ATCACCATCTAATATTGTTACCGTTTTACCCCAGGAACGTCAATTTTGTC
CGATTTATGTGCCTGGTATACAGTAGTACGCACCGGTACCAGGTACCAGG
TATAGACATACCGTCGGCAGACTGCCAACAGCCACTAGCCTTCACACACA
CGCCAAAAGTATTTTTGCCTTCACTCCAGTCGACATGTTCCTACAGAGGT
CATCACGTCATCGCCACAAGCAGTATCTACCTGATACCGGTGTGTATCAA
TGGTAAGCGCGCACCACCTGGCACACAACATCGCGTCAGCGGCGCCGATC
TTGGGGATGCTGCGTTTTGAAGGTAAAAGTACGCACACTCTCTCGTATTG
ATATTACGGGAGAATAGTAGTAATGAGGACCAAATATGCTTAGCAAAAAT
AGTGTATTATATAGGTTTTTGTGTATATCGTGGGTCCTATTTACTATGGT
CCCCCGTAATAGTGATGTTACGGTCTGCGGGATATTTGTACCTCGTGTCC
CCGGCGTCTGTCCCGAAACCCCACTACCTTGGTCCCCACCAAAGCGCCCC
ATTCCGCCCCACGTGTTTCAACATTTTAACTTAAAACGCAAGAAACGTGT
TGCTTGCGGCTGCTACTCTTTAATTTAAACACAACAAGCGTGTTGCTGCT
GCTGCTACTGCTGCTGCTACTGCTGCTGTTGCTGCTGCTTTCTAGGTGGG
GTTCGCGCGCTCGATCGGCATGTATGATGGCATGCTAGTGACGTCGGTTG
GCCAGCAAGGCAGCTCTCTGGAAGCGGTCTACACCGTACCCGAGAACATA
TGCTTGCCACGAGAAACCTCCGGAGGCGACGGCGGGAAGGCGTTCCTCTC
ATGCGGCGCGACTACCGCTATCTTCGACGAGGTGTGATGGTGGTGGTGGT
GATGATGGTGGTGGTGGTGGTGGTGGTTGTGGTTGTGGTGGTGGTGGTGG
TTGTGGTGGTGGTGGTGGTGGTTGTGGTGGTGGTGGTGGTGGTGGTGGTG
GTGGTGGTGGTGGTGGTGGTGGTGGGGGTTGGGGTGGGGGTGGTGGTGGT
GGTGGGGGTGGTGGTGGTGGTGGTTGTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGATG
GTGATGATGATGATGATGGTGGTGGTGATGATTTTGATGGCAGTGATGAT
GATGATGATGGTGGTGGTGGTGGTGATGGTGGTAGTGGTGGTGGTGGTGA
TAATGGTGGTGATGAGGGTGATGTGCTCACATTAGCTATTTTCCCTGAAA
TCTAGCCCGTGGTCACAAAAAACAGGCTGAAACATATCGTACTGTCTGTA
GCGCGCCCACGAAATGCTACCGAATCCTTCGAAATGCTACGGAAGTTGGG
AGGACTGTCCCAGATGGTTTGATTGTTGATTGTTGAGATCAACGCTAGTA
ATGTGGTTGCCCCATGTGTGAAAGCGATGACCGAGAAGCTAGAGCTCAAG
CTTCGTGTGCCCCGGTCCCCCACCCCCTCTCCAACATGGCCTTTTTGCGC
CTGCGCCAAGTTGCTGCAGGATAACGCCAAACTGTCGTACCGCAGGGAAT
GACTTAAACAGCAGACGTGGCGACGGGTGAACGCGATATCAGCTTGAAAA
AGCGCGGTTTTTTAATCCGAAGATTGCACTGGAATGACCCCCTTCGTCTC
GCCTGCTTTGTCGTTTCGTCTCTCGGTTTGTCGTTTGCCGCGGCGCCACC
TTGGTGTGAATTAACCCGGGGTCATCCTCCAACCTATTGCGGCAGGCGTA
AGTCACAACCCCCACCTCACAGCGCTTCGCGCTTGGTGCTAGCGATGTCT
GCCTGGTCGGTGAAAACCCGACGTGCTCCGTCCCGGCATTGTAGGGATGC
GAGGGTCTATAGTCATACGAAGTACGACTACGGCCATGCATGATAATGAG
CACACCCCCACCACGCTGAATTGTTCATTTCCACCGCATTGACAGGTCAG
CACGTTGGCGATGGTCATCGCCGATAAGACCTACCGCCCGGGTGTAAGCA
TATCCCTCAGCTGCCAGATGTTCCACCCCGTCAGGCCGGGGGAAAGGTGC
GTGTACAGGCCAGAGTGCCACGTGTTTTTGGTAGGTACGGTAGGTATTGT
ATGTCCGGTAGGTTCGGTAGGCACGGTAGTAGGTAGGTTCGGTAGGTTCG
GTAGAGTTCGGTAGGTTCGGTAGATTCGGTAGATTCGGTAGGTACAGTAG
GCACGGTAGATACGGTAGTTTTCTCCTGACCCCAAAAGAACCTCCCGCGA
GATGGCGTTCACTAGAACATCCATCGAACGCGATGGGAGCACGGTATTTA
GACTCACCGCAAGACTCCGTTGTAAGATTTATAACATGCAACGGCAGGTT
ATGTGGGACACTTGGTTCGTGGATGTGGGCGTGATTGGAGAACTCTTCAG
ACTTGCGAATGACGTATTTTCTTGTGGTTCATCTGGTGGGGATTTTGGAA
CAGATCCTACTCCCTCGTCTTGTTATACTTGGAAGTATATCCCTCATGAT
TCTCTATATATCGTGTACCTCGAAGGTGGAAACTAATTAGTAACTTGAAT
TAGTATGAAACATATTTGTTTTGGCGTTGTATCGTATTGTATGAATGTGT
CAAACGGGCCAAATCATACTAACCTTTTATAGCTAGGATGCCGACCGATT
CTTTAAAGGGTTTTACGTGGATTGAGTGTGAAAACTGGCCTGGATGATGA
CCTAGGTCCTATTCCTGCACCGCATACGTTTCGCAGTGCGTTGGGACGAT
GTGTTAAATCCAAATTATGGCCGCTCGTCCATTGGGGCGGAGCGGCCGGT
TCAAATCCCTAGTGCTATATACACGTGAAGTGCAAGATTTTCTCCTGGCC
GCTGCTGATGGCTCATATTCGCCCGATACGTTGTTTTGTTGTGCCCCACC
CCCCACCTTACAGAGTAACGTTCAAGTCCCGAGGGCTAAAGATGGGCGGG
CGGCTGGGGTGAGTCCCAAAGAACGCCATAACCTAATCACCCAGGGCGGC
GAGCATGGCAGGGGAGAGAGGGGAGAAGGAGGCGGGGGTGATGGACTATG
CCCACTAACGACGTGGTTCATATTTACAAGAGCACCCCATAGAGGAAGGG
TTCCCGTTTCTTCGGTCTGAGACCATGTTGGAAAAATACATTGCATGCGT
GACACTTATTTATAGTAAGAGACAGAAATGCTGGCTCAGGCTGGGTTTGT
TATCTGGGAAAAGAGTGCACTCTACACGCAAAAAAACAGCATATTAATAG
TAACGACTCCCGATTTCTTGTTTTCTTGTAATTCTCAGGCTGCGTTTCTT
AGTGCTCGTTTTCTTAGCATTAATAGCTGGCCTATACAGTAGTGGTCCCC
GAATAAGGTGGTACGAATAGGGCGGTATCCCTATATAAGGCGGTATAAGC
CGCTGGCACGACTGGAACCCTATTGCCACCAATAAGGCGGTAATAGAGAT
CTCGCACACCATCGCCTTATTCGAGGAGCACTACTCTACCGTAGATAGGA
CGAGACAAAAGCAAATTTCGCCATGTTGCCTCGAGGCAACCCCGCGACAT
ACCGCGCCACTTCGATGGCGACGAAACACTAGCCAACAACCCCCCCCCGT
CGCGAAAGGGATGCGTGGTCAATGCTCAAAGACTAAGGCAAGCAACAAAT
GAGTACGCCCCCCCCCCCCCCGATGTCTGCCTGGTCGGCGAAAACCCGAC
GTGCTCCGTCCCGGCATTGTAGNNNNNNNNNNGGATCCTTCCGGGGATGT
TAGGGATGCGAGGGTCTATGGTAATACGACTACGGTAATGCATGGAAACG
AGAACACCCCCCCCCCCCTCCTCGGAATCAACCTGTGCTCTGCCGCAGAT
ACGGGGAGGCTAGCATGTATCGAGAAGATGGAAAACTGGCGGCGACTGGT
CGACACGTCAAGTACCTCCCGATGGGGCGCGCGTGGGACTTGACCGCGAC
GCCGCTGCTCTTCCCGGTTGCAACCAAGTGGATGGTCCGCCAGCACGAGC
GGTGGCTAAAGGACCCGCATCGTACGAAGGCGAGACGAGAGAGACGTCGC
CACGAGATTGGGGACGGGGGTGTCGTCATTATCATGCATGGCCGTAGGCG
TATGACCATACACCCTCGCAGCCCTACAATGCCTGGACGGAGCACGTCGA
GTGTGCGCCGACCAGGCAGACATTTTATTGCACCAAGCGCGAAGCGCCGT
GAGGTGTTAAGGGAGGGGGACCGAAAGGGAGAGGTGGAAGGAACAATGTC
GCCGTAAAACCTTCTTTTTATGTATATATACAACTGCACGCACGGTTCTG
GGGCACAAACTAGTTGGAAATAGTGTGGGATATTTTCTTGCAGTAGTAAA
AGGGTTCATTCATTAAGCTTTGTGAAGACCGCCATTCGTTGAGGTTTAGA
ATACAGTATGCACTTTTTTTCTATTTACGTGTCTGTCTGCATATCTGCCT
ATCTGCCAGTCTGTTCCGCGGCGGGAGTGGCCTTCTTCGTCGCATGGCTG
ACCCCCCCCCCCCTAACCCCATCATGCAAAATCGCCGCTGTTTTTGCCCT
CACTGACCAAAACCACGACAAAAAAAAAACACAGGACATTCCATGTCCTT
CCCCCCCTCTCCCCCCACCATTCACCGCCTCTGTCGTCATTTTACACCGT
TCCCACCGCCACCACCACCACCACCGCCACCAAGGTAGGGTAACTCGTAC
TCCCCCCCCCTTGCCCCCCCTCCCTACCCTACCCCCCCCCAATTTCAACA
TCAACTCCTCTCTCCCCACCCCACTGACAAAAAAAATCACGACAAAACAA
AAACACAGGGCATTCCTACGGGGGAGCACCTGGTGGACATGTTCAAGCTT
GAACACTTTGAGCGGTACGAGGGCGGGAAAGCAACGGAAGAGTACTTCGG
CGATGCCAATCTAGCCCAAGGGCAGGAAGAAGAAGAGGGGGAGATTCGGA
GCGCCGAAGCAGAGGTTCTCATCACGAGGCGGAAGTGCAACTACATGCCG
GGTACGATGCACGGCGGCGCGATAGCCGTGGCGGCGGAGGAGATCGCTCG
CCGATGTCCCCCGTCGCCCCTCCCCGTAGACGACGCCTCAGTCCTTGGAA
ACCCTTCCATACAGTACATGGAAGTGCACTACATGTCTCCGATAAAGCGA
AGAGCGGGGCTGGCGGCGGTGTCCGCCGCCGCAAATACAGGCATTAATGT
CACGCGGGTGGGTCTCTCAGAGGCCGGTGGGACGGAGGGTGGCGTTCTTT
GCGCGGAGGCGGTTTTGTTGTGGGGACAAAAGGAAGGTGTTTAAGTCTAT
AACCCCTTTAGAACTAGCTACCCCCATGTTTTTTGGGACGAACGACTTGG
AGTTAAGTGTGAACTATTTTCTGTGGAGACAAAAGGATGGTGTTTGAGTA
TAGTATTTGTGTTGGGTATTCATTTGGCACTAACCACTACCCTACATAGT
CGCGTGACTATTAACAGCTTGACGGGTAAGTCGTCCGCTTCTAAGCATGA
GGTGTATGCGTGGCTTCGATTCCCAGCATCGTCAGTTTTTCTTGCGTGAA
AAAGGCTCGAACGTTCTTGATCTATGATGCCAGAGAGTAGTACGTGGAGG
GGGGAGATCCCCGGAGATCAATGCCATAGCGAAAATCGATTCGAACCCGC
GAAGTAACCCGCGAACTATGTATTTTGTTGGTGTGACTATGAAAGCCAGT
GGGTAGTGCTACGTATATAACCAGCACACTTTGAGCGACTAGATGAGGAG
ACGGGGCAGGGCGGTTGCGCGGAAGACATCCGCACCCAACAAGCGCACCG
AACAGCGGCACGTCGCCGTGGGGGCGGCGCGAGGGTCATTCTTGATCCTC
GTTTCCAGTCGTAAAGTCACGGAGGGACGACGCCTGGCCTTTTTCGACAC
CGTGCGGGGCGATATCGACCCGGGGGATCGCCGATTTCGTCCCGGGGTTG
TTGGAGTTGTAGAGATATGGAAGGATATCTGATCCGGGGATGGATCATCG
GAGAGGTAGAGTACCAGCTCGCCATCTGCGGGCCTGTCTGCAGGTTTTGA
GCGCCTCCATGGGTCTCTAGTCATGGAGGCGTGTAAACGGGCAATTAACT
CGGCGCACTGCAGCAGTGCCGCTCTTGTTGTGTCGTTCGATCAACCATTT
GCCTTCTGAAACTGGCAATTAGTTGAAGTACGTAGAGGTATGAATATGTC
GGTTCGTTACTTCAACGTTCACGTATTTTGGGTACTTACCCCCTGTAGAA
CTGCACTCAATTTTTTCGGGGAAATCACTTGAAGTTAGTGTGGGATGATT
TTCGCAGTGGTACAAGGGTTAAACACCGCATTGTTGGGGTTGCTTTCACG
TGTCAGAGCGACGCGTGTTTTCGGTATTGGCGCAACAGACGCGTTCAATG
GAGGTAAGCGACCTTCAATGAAGATAGAAACGTGCAACCATACGCGGCGT
TTTGGCTTCTCAACAGAGCGAAGTTGGCTTTTGGCTAATCCTCTCACGGT
GGACAAAGTGGACGAGGTGACGAGATACCTTAAGTAGGTCAACCCCTTTG
AGACTTCAGAGGGAAACTGTCGAAGCAATGCACACGCCCGACAGATCATG
ATCTAGATCAACCATTCATTGTAGATCCTAACCTGCCGTTGTGAGATGTT
GTGCAGGATCTGTATAGTACAGATCCAACTCAGGAAACCTGCCCTAAAAT
CATGCAGATTGTACGACTCCCACCCGGCAACATGAGCTAGATCAGACAGA
TCAGGAAATCGATCTGCCATGAATCTAGATCGACAAGTAGGAATCGATTA
TCTGTCTGAGGTGTGGAAAAAGGTGACGATTTTTACAGCGTCGGCCATAC
GAAACAACCAATCAATGCTGCTGGGGTAGT
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Coding sequence (CDS) from alignment at L-digitata_M_contig10237:1727..9306-

>mRNA_L-digitata_M_contig10237.2.1 ID=mRNA_L-digitata_M_contig10237.2.1|Name=mRNA_L-digitata_M_contig10237.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1017bp|location=Sequence derived from alignment at L-digitata_M_contig10237:1727..9306- (Laminaria digitata LdigPH10_18mv male)
ATGTATGATGGCATGCTAGTGACGTCGGTTGGCCAGCAAGGCAGCTCTCT
GGAAGCGGTCTACACCGTACCCGAGAACATATGCTTGCCACGAGAAACCT
CCGGAGGCGACGGCGGGAAGGCGTTCCTCTCATGCGGCGCGACTACCGCT
ATCTTCGACGAGGTCAGCACGTTGGCGATGGTCATCGCCGATAAGACCTA
CCGCCCGGGTGTAAGCATATCCCTCAGCTGCCAGATGTTCCACCCCGTCA
GGCCGGGGGAAAGAGTAACGTTCAAGTCCCGAGGGCTAAAGATGGGCGGG
CGGCTGGGATACGGGGAGGCTAGCATGTATCGAGAAGATGGAAAACTGGC
GGCGACTGGTCGACACGTCAAGTACCTCCCGATGGGGCGCGCGTGGGACT
TGACCGCGACGCCGCTGCTCTTCCCGGTTGCAACCAAGTGGATGGTCCGC
CAGCACGAGCGGTGGCTAAAGGACCCGCATCGTACGAAGGCGAGACGAGA
GAGACGTCGCCACGAGATTGGGGACGGGGGTGGCATTCCTACGGGGGAGC
ACCTGGTGGACATGTTCAAGCTTGAACACTTTGAGCGGTACGAGGGCGGG
AAAGCAACGGAAGAGTACTTCGGCGATGCCAATCTAGCCCAAGGGCAGGA
AGAAGAAGAGGGGGAGATTCGGAGCGCCGAAGCAGAGGTTCTCATCACGA
GGCGGAAGTGCAACTACATGCCGGGTACGATGCACGGCGGCGCGATAGCC
GTGGCGGCGGAGGAGATCGCTCGCCGATGTCCCCCGTCGCCCCTCCCCGT
AGACGACGCCTCAGTCCTTGGAAACCCTTCCATACAGTACATGGAAGTGC
ACTACATGTCTCCGATAAAGCGAAGAGCGGGGCTGGCGGCGGTGTCCGCC
GCCGCAAATACAGGCATTAATGTCACGCGGGTGGGTCTCTCAGAGGCCGG
TGGGACGGAGGGTGGCGTTCTTTGCGCGGAGGCGGTTTTGTTGTGGGGAC
AAAAGGAAGGTGTTTAA
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