mRNA_L-digitata_M_contig102361.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig102361.1.1
Unique NamemRNA_L-digitata_M_contig102361.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: A0A848XWL7_9BACT (TonB-dependent receptor n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A848XWL7_9BACT)

HSP 1 Score: 281 bits (718), Expect = 3.160e-84
Identity = 149/305 (48.85%), Postives = 193/305 (63.28%), Query Frame = 1
Query:    1 PQYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAAD-PIVVNGMQQRLPSIDLGSGKLDAAAFAR-SGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQFTPHRHGSDVSFSD 909
            P+ G L G+V+D+ETG+PLP+ANV LAD STGTAA  +G+FT   LL GPH +V +YVGYEP    + +P  G+ R++I+L+P  +  D PIVV+G+ QRLPS  LG   LDA  F   SGF  +D V   AS+ + +  R P  DL IQG  + E ++ LDGVP+FEP S GRLL AFSPLAI RLTVHKAGFGA  GS L GII AE  + +  +    L  DP   NAR      L        ++A R+S+WDLYR + L+  ++DWN +DP L AT          FTPHRHGS++ ++D
Sbjct:  110 PRRGALGGVVVDAETGEPLPFANVLLADTSTGTAAGSSGLFTLNGLLPGPHTLVASYVGYEPVRAEVMVPEGGTTRRRIALQPQIVMTDQPIVVDGLAQRLPSELLGEAALDATDFETPSGFTASD-VTREASTRLGLSSRSPVADLSIQGSTTGEQRVLLDGVPIFEPTSFGRLLSAFSPLAIRRLTVHKAGFGATRGSYLGGIIEAEHAIDAR-SPEATLDSDPYQVNARARSGFQLGNNVRGAVLLAARSSLWDLYRPSALDASIRDWNRIDPLLAATWTTIPLSTATFTPHRHGSELGYTD 412          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: UPI0014228655 (carboxypeptidase-like regulatory domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=UPI0014228655)

HSP 1 Score: 274 bits (700), Expect = 1.280e-81
Identity = 147/301 (48.84%), Postives = 185/301 (61.46%), Query Frame = 1
Query:    7 YGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQFTPHRHGSDVSFSD 909
            +GDLAG VID ETG PLP ANV LA+A+TGT  N AG F+F  L+ GP+ VV TYVGYE A DS+W+      R ++ L+P  +   PIV++G+ QRLPS  LGSG+    A A   F GT DV   A  +  V    P  DLHIQGG   EH  +LDG+PV  PVSLGR LGAFSPLA+ RL VHKAGFG   GS L+G+++AE ++  E      + LDP+SANAR +  + LPG+     M AGRT +W  Y+   +  +L+ WN+VDPQL    LG       F       DV+FSD
Sbjct:  118 FGDLAGQVIDGETGVPLPAANVLLAEAATGTTTNDAGFFSFAGLVSGPYRVVVTYVGYETARDSVWVAPGARARLQVRLRPRTVPMHPIVIDGLSQRLPSRMLGSGEAGPQALASVTFAGTPDVARGAGRLPGVAATQPLADLHIQGGGGGEHLTRLDGIPVRHPVSLGRHLGAFSPLALRRLVVHKAGFGVEHGSHLAGLVAAEHHVNGEHR--LAVSLDPISANARTHARLTLPGKRPMDLMFAGRTGLWAQYQDPGVAALLRRWNSVDPQLAGRWLGQPVTTRSFAVLHPLPDVAFSD 416          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: A0A1V0DGI6_9BACT (STN domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DGI6_9BACT)

HSP 1 Score: 263 bits (671), Expect = 2.060e-77
Identity = 141/305 (46.23%), Postives = 189/305 (61.97%), Query Frame = 1
Query:    1 PQYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQ--FTPHRHGSDVSFSD 909
            P  G LAG VID ETG+PLPYANV LADA+ GT  N AG+F+  +LL GPH VV +Y+GY  AVDS+WI    + R +++L+P  I  +P+VV+G+ Q++PS  LG G++D  A  R    GT DV  +A  +  + ++ P  DLHIQG  + EH   LDG PV  PVSLGR LGAFSPLA+ R+TVHKAGF A  GS L+G+I A  +L         L LDP+S N R+    +      +  + A RTSVW++YR   +  +L+ WNT+DP + +  LG   P+ Q   T +R    V+FSD
Sbjct:  117 PLRGALAGSVIDGETGEPLPYANVLLADAAAGTTTNEAGLFSIANLLSGPHRVVVSYLGYGTAVDSVWIEPGQAQRLRVALRPQHIVIEPLVVDGLAQQVPSGRLGRGEVDGEALRRPRLAGTPDVALSAGRLPGLSVQQPLADLHIQGSGTGEHLTLLDGTPVRNPVSLGRHLGAFSPLALRRITVHKAGFDAARGSHLAGVIHASHDLDGPHTPGLALSLDPVSLNGRVQHRWSWRDGGRAAILAALRTSVWEVYRDPGVQTLLESWNTLDPVVGSLWLG--DPVSQHSLTLYRQTPRVAFSD 419          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: A0A6M1SX25_9BACT (TonB-dependent receptor n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SX25_9BACT)

HSP 1 Score: 261 bits (667), Expect = 7.120e-77
Identity = 128/303 (42.24%), Postives = 192/303 (63.37%), Query Frame = 1
Query:    1 PQYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQFTPHRHGSDVSFSD 909
            P+YG LAGIV+D  TG+PL  ANV +ADASTGT++NGAG FT   LL G + +  TYVGY+   D++ IP +    ++  L+   +  +P+V++ +Q+RLP  + G  ++     + S + G+ D L +  SVM V    P  D +IQGG   EHQ+ LDGVP++ P S GRL GAFSP A+ ++TVHKAG+G+ VGSQLSGIIS +Q+L +++ K+ +LQ+DPLS N R+N   ++  +     M+AGR+++W  Y+   L+  L++W+ +DP ++   +      + F    H SDV F D
Sbjct:  110 PRYGSLAGIVLDKSTGKPLEGANVLIADASTGTSSNGAGRFTIAPLLTGNYEITITYVGYQTVRDTVSIPRQQDSLRRFYLESRPVFVEPLVISSLQKRLPYYNSGKEEVTNLTNSLSSYTGSPDALRSVESVMGVNFSIPLADFNIQGGAEGEHQVMLDGVPIYNPTSFGRLTGAFSPYALQKITVHKAGYGSSVGSQLSGIISIDQDLPADEEKNLMLQVDPLSLNGRINLATSINDDIQFKTMIAGRSNIWRWYQKPALSNTLENWDRLDPIISGNLINNGMEDVFFEKVNHRSDVDFYD 412          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: A0A2P6C1I5_9BACT (STN domain-containing protein n=1 Tax=Salinibacter sp. 10B TaxID=1923971 RepID=A0A2P6C1I5_9BACT)

HSP 1 Score: 261 bits (666), Expect = 8.700e-77
Identity = 136/300 (45.33%), Postives = 196/300 (65.33%), Query Frame = 1
Query:   10 GDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQFTPHRHGSDVSFSD 909
            GDL GIV+D+ TG+PL +A+V LA A+TG A+N AG F    L  G H VV T++GYEPAVDS+ +     + ++I+L+P+ +A+ PIVV+G ++  P   LG+  L A    ++G  GT DVL  A + M V  + P  DLH+QGG + EH+++LDG+P+  PV+L RLLGAFSPLA+ RLTV KAGFG   GS +SGI+SAE  L +    +  + LDP+S NA  +  ++L    ++   VA R+SVWD+Y+  TL+ +L++WN VDP L ++  G  + +  F+P    +DV FSD
Sbjct:  123 GDLTGIVVDARTGEPLSHAHVILATANTGAASNEAGRFQVPGLTSGVHRVVATHLGYEPAVDSVRVLPGDRVERRITLEPTALASKPIVVDGAERHGPEDGLGAPSLGAGELKKTGRMGTPDVLGRAGTRMGVYRQFPRADLHVQGGGAGEHEVRLDGMPIRNPVTLRRLLGAFSPLALDRLTVRKAGFGVEHGSTISGIVSAEHALSTSTPTYGEVTLDPMSVNAEGHGSIDLREGRSAHLRVAARSSVWDVYQDPTLDRLLREWNVVDPMLLSSYFGDGTDLPAFSPVAQTADVGFSD 422          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: UPI000A58C593 (carboxypeptidase-like regulatory domain-containing protein n=1 Tax=Rhodothermus marinus TaxID=29549 RepID=UPI000A58C593)

HSP 1 Score: 248 bits (634), Expect = 6.670e-75
Identity = 130/282 (46.10%), Postives = 181/282 (64.18%), Query Frame = 1
Query:    1 PQYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALG 846
            P+ G L G V+D  TG PLP+A+V LADA TGT  N AGMFT + LL GPH +V +YVGY P +DS+WI  +     +I+L+P+ + A PIV++G+++R  S +LG   L A    ++G  G  D+L+    +  V +  P  +LH+QGG+S EH  +LDG+P+  PVSLGR L AFSPLAIGRLTVH+AG+G  +GSQL+G+I  E +L        V ++DPL+AN RL          ++  +VA R S+WDLY+   L  +L+ WNT+DP + A  LG
Sbjct:   88 PRLGLLTGQVVDGTTGAPLPFAHVLLADAGTGTVTNEAGMFTISGLLAGPHRLVVSYVGYRPKLDSVWIDPDRPAHVRIALEPTLLEAPPIVIDGLRRRPLSAELGRAHLTAEQIQQTGTSG--DLLHAVERLPGVQVPHPLAELHLQGGDSGEHLTRLDGMPIRNPVSLGRYLSAFSPLAIGRLTVHRAGYGVALGSQLAGLIDLEHDLNVPRPLEAVARVDPLAANVRLRGRYQ-----DAAVLVALRQSLWDLYQEPGLRTLLRQWNTIDPLMAARWLG 362          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: A0A2A8CTL5_9BACT (STN domain-containing protein n=1 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8CTL5_9BACT)

HSP 1 Score: 249 bits (635), Expect = 3.650e-72
Identity = 131/312 (41.99%), Postives = 189/312 (60.58%), Query Frame = 1
Query:    4 QYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFAR-SGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTA-----TALGANSPI----LQFTPHRHGSDVSFSD 909
            +YG +AG+V+D+ TG+PLP AN+ LADA+TGT+ N +G+F  + L++GPH V+ +YVGYE AV  I +      ++KI L P  +  +P++V+G+Q R+PS  LG    +A      +   GT D+   A ++M +  + P  DLHIQGG S EH+M LDGVPV  PVS+GRL+ AFSPLA+GRLT HKAG+GA  GS LSG++  E +L   + +   L  DP+S NAR      + G    T M   R  +WD+Y+   L+ ++QDW+++DP L       TA  ++  +    L    + H   V FSD
Sbjct:  125 RYGQIAGVVVDASTGEPLPDANIILADAATGTSTNTSGLFQLSKLVEGPHEVMVSYVGYEMAVLRIEVEPGQQTKRKIELTPRPLLTEPVIVDGLQPRMPSSSLGQEAAEAGELEEPAASTGTGDIARTAGTLMGIATQSPLADLHIQGGASGEHEMVLDGVPVRNPVSVGRLISAFSPLALGRLTTHKAGYGAMKGSYLSGVVELEHDLTRRNTRWATLSADPVSTNARAQGTFEIYGRP-ITVMGTARVGMWDVYQDPALHALIQDWSSLDPLLARAWAYPTASSSDPTLSDVSLSSAGYNHQPAVQFSD 435          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: D0MK46_RHOM4 (TonB-dependent receptor plug n=6 Tax=Rhodothermus marinus TaxID=29549 RepID=D0MK46_RHOM4)

HSP 1 Score: 248 bits (632), Expect = 5.250e-72
Identity = 134/282 (47.52%), Postives = 179/282 (63.48%), Query Frame = 1
Query:    1 PQYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALG 846
            P+ G L G VID  TG PLP+A+V LADA TGT  N AGMFT + LL GPH +V +YVGY P VDS+ +  +     +I+L+P+ + A PIV++G+ +R  S +LG   L A    ++G  G  D+L+    +  V +  P  +LH+QGG+S EH  +LDGVPV  PVSLGR L AFSPLAIGRLTVH+AG+G  +GSQL+G+I  E +L        V ++DPL+AN RL          N+  +VA R SVWDLY+   L  +L+ WNT+DP + A  LG
Sbjct:   95 PRLGLLTGQVIDGTTGAPLPFAHVLLADAVTGTVTNEAGMFTISGLLAGPHRLVVSYVGYRPRVDSVRVDPDRPAHVRIALEPTLLEAPPIVIDGLSRRPLSAELGRAYLTAEQLQQAGTTG--DLLHAVERLPGVQVPHPLAELHLQGGDSGEHLTRLDGVPVRNPVSLGRYLSAFSPLAIGRLTVHRAGYGVALGSQLAGVIELEHDLNVPGPLEAVARVDPLAANVRLRGRYR-----NAAALVAFRRSVWDLYQEPGLRTLLRQWNTIDPLMAARWLG 369          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: A0A2H3P2M0_9BACT (TonB-dependent receptor n=2 Tax=Longimonas halophila TaxID=1469170 RepID=A0A2H3P2M0_9BACT)

HSP 1 Score: 248 bits (632), Expect = 9.800e-72
Identity = 136/300 (45.33%), Postives = 175/300 (58.33%), Query Frame = 1
Query:   10 GDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQFTPHRHGSDVSFSD 909
            G L G V+D+ETG PLP ANV LADAS G A N AG F F+ +L G H VV TYVGYE  V  +W+P +G  R +I+L P+ + A P+V+NG+++RLPS  LG+   D  A  R    GT DV +       V +  P  DLH+QGG+  EH   LDGVP+ EPV+LG L+ AFSP A+ R+ VHKAGFGA  GS  +G+I+AE +L      +  +  DP+S NAR     +    A+   M A RTSVWD+YRS  L+  L  W   DP LT     A+         R  +D  FSD
Sbjct:  140 GRLTGTVVDAETGMPLPDANVLLADASAGRATNEAGRFHFSPILAGEHQVVVTYVGYESEVKRVWVPQDGQERVRIALNPAPLTAPPLVINGLERRLPSFRLGTNTTDREALERVEGPGTPDVAHAVRRQPGVALGHPRADLHVQGGDIGEHATLLDGVPIREPVTLGGLVSAFSPDALRRVQVHKAGFGAQHGSYTAGVIAAEHDLARPRTNYAQVSADPVSINARAEASWSAGDTASGRVMGAVRTSVWDIYRSPALHHRLATWTRPDPTLTMQWDPASVENTTGLAQRSSADAQFSD 439          
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Match: A0A2P6C5N1_9BACT (TonB-dependent receptor n=2 Tax=Salinibacter sp. 10B TaxID=1923971 RepID=A0A2P6C5N1_9BACT)

HSP 1 Score: 247 bits (630), Expect = 1.040e-71
Identity = 136/303 (44.88%), Postives = 184/303 (60.73%), Query Frame = 1
Query:    1 PQYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGPHAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRLPSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGGESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQLSGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGRTSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQFTPHRHGSDVSFSD 909
            P  G +AG V+D+ TG+PLP ANV LADA TGTA N AG FT   +L G H +V TYVGY  A+DS+ +P  G    +++L+   +   PIVV+G+QQRLPS  LG   L + A  +   +GT DVL +AS  + V +  P  ++++QGG S EH M+LDGVPV EPVSLG LL AFSP A+ RLTVHKAGFGA  GS  +G++ A  +L   D ++   Q+DPLS +AR + +      +    M A RTSVWD YR+ +L+ +L    T+D  L ++ +G              + V FSD
Sbjct:   99 PSTGRIAGRVVDAATGEPLPNANVLLADAGTGTATNSAGQFTVAPVLAGMHRLVVTYVGYRSALDSVRVPPNGRDTIRVALRRRVVDTAPIVVDGLQQRLPSASLGRTTLSSDALEQMSGRGTPDVLRSASRRIGVSLNRPLAEVNVQGGSSGEHVMRLDGVPVREPVSLGGLLSAFSPQALERLTVHKAGFGAAHGSYTAGVMDATHDLSRSDAQYGAAQIDPLSIHARADLEWLTSSSSTGQAMGAVRTSVWDAYRAPSLHSLLDTRTTLDRALASSWMGTVGAKDADPTQTRRAHVQFSD 401          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102361.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A848XWL7_9BACT3.160e-8448.85TonB-dependent receptor n=1 Tax=Rhodothermaceae ba... [more]
UPI00142286551.280e-8148.84carboxypeptidase-like regulatory domain-containing... [more]
A0A1V0DGI6_9BACT2.060e-7746.23STN domain-containing protein n=2 Tax=Bacteroidete... [more]
A0A6M1SX25_9BACT7.120e-7742.24TonB-dependent receptor n=1 Tax=Balneolaceae bacte... [more]
A0A2P6C1I5_9BACT8.700e-7745.33STN domain-containing protein n=1 Tax=Salinibacter... [more]
UPI000A58C5936.670e-7546.10carboxypeptidase-like regulatory domain-containing... [more]
A0A2A8CTL5_9BACT3.650e-7241.99STN domain-containing protein n=1 Tax=Longibacter ... [more]
D0MK46_RHOM45.250e-7247.52TonB-dependent receptor plug n=6 Tax=Rhodothermus ... [more]
A0A2H3P2M0_9BACT9.800e-7245.33TonB-dependent receptor n=2 Tax=Longimonas halophi... [more]
A0A2P6C5N1_9BACT1.040e-7144.88TonB-dependent receptor n=2 Tax=Salinibacter sp. 1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig102361contigL-digitata_M_contig102361:5..913 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog518766.Rmar_0050
Model size909
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.6e-73
EggNOG OGsCOG1629@1|root,COG4796@1|root,COG1629@2|Bacteria,COG4796@2|Bacteria,4PM5G@976|Bacteroidetes,1FKEJ@1100069|Bacteroidetes Order II. Incertae sedis
DescriptionSecretin and TonB N terminus short domain
Cds size909
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406628.5943425-CDS-L-digitata_M_contig102361:4..9131682406628.5943425-CDS-L-digitata_M_contig102361:4..913Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig102361 5..913 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig102361.1.1prot_L-digitata_M_contig102361.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig102361 5..913 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig102361.1.1

>prot_L-digitata_M_contig102361.1.1 ID=prot_L-digitata_M_contig102361.1.1|Name=mRNA_L-digitata_M_contig102361.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=303bp
PQYGDLAGIVIDSETGQPLPYANVFLADASTGTAANGAGMFTFTSLLKGP
HAVVTTYVGYEPAVDSIWIPAEGSIRKKISLKPSFIAADPIVVNGMQQRL
PSIDLGSGKLDAAAFARSGFQGTDDVLYNASSVMAVGIRPPYVDLHIQGG
ESSEHQMQLDGVPVFEPVSLGRLLGAFSPLAIGRLTVHKAGFGAPVGSQL
SGIISAEQNLQSEDNKHFVLQLDPLSANARLNFDVNLPGEANSTFMVAGR
TSVWDLYRSNTLNGMLQDWNTVDPQLTATALGANSPILQFTPHRHGSDVS
FSD
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mRNA from alignment at L-digitata_M_contig102361:5..913+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig102361.1.1 ID=mRNA_L-digitata_M_contig102361.1.1|Name=mRNA_L-digitata_M_contig102361.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=909bp|location=Sequence derived from alignment at L-digitata_M_contig102361:5..913+ (Laminaria digitata LdigPH10_18mv male)
CCGCAATATGGAGATTTGGCGGGTATTGTTATTGATTCGGAAACGGGCCA ACCCCTCCCCTATGCGAATGTATTTCTCGCTGATGCTTCCACCGGCACGG CGGCCAATGGCGCCGGCATGTTCACGTTCACCTCATTGCTGAAAGGTCCG CATGCTGTTGTGACCACATATGTAGGCTATGAGCCGGCGGTAGACAGCAT TTGGATTCCGGCAGAAGGCAGTATCCGCAAAAAAATATCGCTCAAGCCGT CCTTCATCGCTGCTGATCCGATTGTCGTTAATGGAATGCAGCAACGCCTG CCTTCTATTGATCTGGGATCTGGAAAACTTGATGCTGCAGCCTTTGCTCG CTCAGGCTTTCAGGGGACGGATGATGTGCTATATAATGCCAGCTCAGTCA TGGCTGTTGGCATTCGCCCCCCTTATGTTGACCTTCATATTCAAGGCGGT GAATCCAGCGAGCACCAGATGCAGCTAGACGGCGTTCCTGTCTTTGAACC GGTGAGCCTCGGCAGACTCCTTGGCGCTTTTAGTCCGCTTGCTATTGGAC GGCTTACGGTGCATAAAGCCGGCTTTGGTGCACCTGTTGGAAGTCAGCTA TCTGGTATTATATCGGCTGAGCAAAACTTACAATCTGAAGACAACAAACA TTTCGTCTTACAGCTCGACCCGCTCAGCGCAAATGCCCGACTAAATTTTG ATGTGAACCTGCCCGGAGAGGCGAATAGCACCTTTATGGTGGCCGGACGT ACGAGTGTTTGGGATTTATATCGCTCCAACACCCTCAACGGCATGTTGCA AGATTGGAATACCGTTGATCCGCAATTAACAGCTACGGCCCTGGGTGCAA ACTCACCTATCTTGCAATTTACGCCGCATCGTCACGGATCTGATGTTTCA TTCTCTGAC
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Coding sequence (CDS) from alignment at L-digitata_M_contig102361:5..913+

>mRNA_L-digitata_M_contig102361.1.1 ID=mRNA_L-digitata_M_contig102361.1.1|Name=mRNA_L-digitata_M_contig102361.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=909bp|location=Sequence derived from alignment at L-digitata_M_contig102361:5..913+ (Laminaria digitata LdigPH10_18mv male)
CCGCAATATGGAGATTTGGCGGGTATTGTTATTGATTCGGAAACGGGCCA
ACCCCTCCCCTATGCGAATGTATTTCTCGCTGATGCTTCCACCGGCACGG
CGGCCAATGGCGCCGGCATGTTCACGTTCACCTCATTGCTGAAAGGTCCG
CATGCTGTTGTGACCACATATGTAGGCTATGAGCCGGCGGTAGACAGCAT
TTGGATTCCGGCAGAAGGCAGTATCCGCAAAAAAATATCGCTCAAGCCGT
CCTTCATCGCTGCTGATCCGATTGTCGTTAATGGAATGCAGCAACGCCTG
CCTTCTATTGATCTGGGATCTGGAAAACTTGATGCTGCAGCCTTTGCTCG
CTCAGGCTTTCAGGGGACGGATGATGTGCTATATAATGCCAGCTCAGTCA
TGGCTGTTGGCATTCGCCCCCCTTATGTTGACCTTCATATTCAAGGCGGT
GAATCCAGCGAGCACCAGATGCAGCTAGACGGCGTTCCTGTCTTTGAACC
GGTGAGCCTCGGCAGACTCCTTGGCGCTTTTAGTCCGCTTGCTATTGGAC
GGCTTACGGTGCATAAAGCCGGCTTTGGTGCACCTGTTGGAAGTCAGCTA
TCTGGTATTATATCGGCTGAGCAAAACTTACAATCTGAAGACAACAAACA
TTTCGTCTTACAGCTCGACCCGCTCAGCGCAAATGCCCGACTAAATTTTG
ATGTGAACCTGCCCGGAGAGGCGAATAGCACCTTTATGGTGGCCGGACGT
ACGAGTGTTTGGGATTTATATCGCTCCAACACCCTCAACGGCATGTTGCA
AGATTGGAATACCGTTGATCCGCAATTAACAGCTACGGCCCTGGGTGCAA
ACTCACCTATCTTGCAATTTACGCCGCATCGTCACGGATCTGATGTTTCA
TTCTCTGAC
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