mRNA_L-digitata_M_contig102283.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: A0A2E7PJP5_9PROT (Sulfur carrier protein FdhD n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PJP5_9PROT) HSP 1 Score: 275 bits (702), Expect = 8.420e-91 Identity = 139/159 (87.42%), Postives = 144/159 (90.57%), Query Frame = 1
Query: 10 LIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
+ PNPDDP LTEPV GIDQDGN + +RVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDD ITGIDHDDDLGVVVVRTDR TDYE RLKKKTLTSGCAQGTVFGDL+ES EG+ LN DA L TS LYALTKAINTMPSLYL AGAIHG
Sbjct: 7 IRPNPDDPSLTEPVCGIDQDGNPISARVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDEITGIDHDDDLGVVVVRTDRETDYEARLKKKTLTSGCAQGTVFGDLIESLEGMVLNPDAELRTSWLYALTKAINTMPSLYLAAGAIHG 165
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: A0A2E8XSP0_9PROT (Sulfurtransferase FdhD (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XSP0_9PROT) HSP 1 Score: 263 bits (672), Expect = 3.340e-87 Identity = 134/159 (84.28%), Postives = 143/159 (89.94%), Query Frame = 1
Query: 10 LIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
L P+PDDPRLTEPV+GIDQ+GN V++RVVVERPLTLFLNGQEIVTMMTIGD+P+YLAVGYLANQNMLLP+D ITGIDHDDDL VVVVRT+R TDYE RLKKKTLTSGCAQGTVFGDLMES EGV L DA L TS LY LTKAINT PSLYL AGAIHG
Sbjct: 7 LHPDPDDPRLTEPVTGIDQNGNPVDARVVVERPLTLFLNGQEIVTMMTIGDHPEYLAVGYLANQNMLLPEDRITGIDHDDDLDVVVVRTERQTDYETRLKKKTLTSGCAQGTVFGDLMESLEGVTLKPDAELRTSWLYELTKAINTTPSLYLAAGAIHG 165
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: A0A2E7I5U7_9PROT (Sulfur carrier protein FdhD n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I5U7_9PROT) HSP 1 Score: 264 bits (675), Expect = 9.330e-87 Identity = 133/160 (83.12%), Postives = 141/160 (88.12%), Query Frame = 1
Query: 7 SLIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
S+ P+PDDPRLTE + G DQDGN +++RVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNML+PDD ITGIDHDDDL VVVVRT+R TDYE RLKKKTLTSGCAQGTVFGDLMES EG L DA L TS LY LTKAINTMPSLYL AGAIHG
Sbjct: 6 SIHPDPDDPRLTERIRGFDQDGNPIDTRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLMPDDEITGIDHDDDLAVVVVRTERQTDYEARLKKKTLTSGCAQGTVFGDLMESLEGAVLKPDAELRTSWLYKLTKAINTMPSLYLAAGAIHG 165
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: A0A848WAY0_9PROT (Sulfur carrier protein FdhD n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WAY0_9PROT) HSP 1 Score: 250 bits (638), Expect = 7.510e-81 Identity = 128/157 (81.53%), Postives = 138/157 (87.90%), Query Frame = 1
Query: 16 PNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
PNPDDPRLTE V+GID+ G V++ VVVERPLTLFLNGQEIVTMMT+GDYP+YLAVGYLANQNMLLPDD I ++HDDDL VVVVRT R T+YE +L KKTLTSGCAQGTVFGDLMESFE V LN DARL TS LYALTK INTMPSLYLTAGAIHG
Sbjct: 8 PNPDDPRLTERVTGIDERGGKVDASVVVERPLTLFLNGQEIVTMMTVGDYPEYLAVGYLANQNMLLPDDEIIEVEHDDDLEVVVVRTARQTNYEAKLAKKTLTSGCAQGTVFGDLMESFEDVSLNRDARLKTSWLYALTKQINTMPSLYLTAGAIHG 164
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: UPI0019DCE819 (Formate dehydrogenase accessory sulfurtransferase FdhD n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019DCE819) HSP 1 Score: 236 bits (601), Expect = 2.040e-75 Identity = 118/157 (75.16%), Postives = 133/157 (84.71%), Query Frame = 1
Query: 16 PNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
P+P+D RLT+ VSGID DG +E+RVVVERPLTLFLNGQEIVTMMTIGD+PDYL VGYL NQNMLLPDD +T +++DDD+ VVVRT R TD+EE+LKKKTLTSGCAQGT+FGDLME FE V L D L TS LY+LTK INT PSLYLTAGAIHG
Sbjct: 8 PDPEDARLTQAVSGIDHDGQPIETRVVVERPLTLFLNGQEIVTMMTIGDHPDYLGVGYLINQNMLLPDDEVTAVEYDDDIETVVVRTKRKTDFEEKLKKKTLTSGCAQGTIFGDLMERFEDVRLPQDVILKTSWLYSLTKKINTAPSLYLTAGAIHG 164
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: A0A838XHT2_9HYPH (Sulfur carrier protein FdhD n=2 Tax=Stappia TaxID=152161 RepID=A0A838XHT2_9HYPH) HSP 1 Score: 236 bits (601), Expect = 2.950e-75 Identity = 117/159 (73.58%), Postives = 135/159 (84.91%), Query Frame = 1
Query: 10 LIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
+ P+PDDPRL++PV+G+DQDG V+ RVV ER LTLFLN QE+VTMMTIGD PD LAVGYL NQNML PDD +TGID+D+DL VVVVRT+R TDYEE++KKK TSGCAQGTVFGD+ME F+ + L+ DARLHTS LYALTK INT PSLYL AGAIHG
Sbjct: 16 IRPDPDDPRLSQPVTGLDQDGKPVDLRVVSERALTLFLNAQEVVTMMTIGDRPDLLAVGYLLNQNMLRPDDVLTGIDYDEDLEVVVVRTERATDYEEKMKKKVRTSGCAQGTVFGDVMERFDEIALDPDARLHTSWLYALTKKINTQPSLYLAAGAIHG 174
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: UPI000E5C8CBF (formate dehydrogenase accessory sulfurtransferase FdhD n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5C8CBF) HSP 1 Score: 235 bits (600), Expect = 4.180e-75 Identity = 118/159 (74.21%), Postives = 134/159 (84.28%), Query Frame = 1
Query: 10 LIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
L P+PDDPRLT+ V GID+ G +E+RVV+ERPLTLFLNGQEIVTMMTIGDYPDYLAVGYL NQNML DD I GID+D++L VVVVRT R T+YEE+LKKK TSGCAQGTVFGDLME F+ + LN +ARL TS LYALT+ IN PSLYLT+GAIHG
Sbjct: 8 LRPDPDDPRLTQAVRGIDETGQAIETRVVIERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLLNQNMLRADDEIAGIDYDEELEVVVVRTARATNYEEKLKKKIRTSGCAQGTVFGDLMEKFDDIRLNPEARLKTSDLYALTRKINGAPSLYLTSGAIHG 166
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: A0A2U1WSV2_9PROT (Sulfur carrier protein FdhD n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WSV2_9PROT) HSP 1 Score: 234 bits (598), Expect = 5.980e-75 Identity = 116/160 (72.50%), Postives = 135/160 (84.38%), Query Frame = 1
Query: 7 SLIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
++ P+P DP+LTE VSG+DQDG+ +E+ V VERPLTLFLNGQE+VTMMTI DYP+YL VGYL NQNML PDDTITGID+D++ VVVVRT+R TDY+E+LKKKTLTSGCAQGT FGD+ME FE V LN D RL TS +YAL+K IN PSLYL AGAIHG
Sbjct: 7 TIRPDPADPKLTERVSGLDQDGHAIETSVTVERPLTLFLNGQEVVTMMTIADYPEYLGVGYLLNQNMLKPDDTITGIDYDEETDVVVVRTERRTDYQEKLKKKTLTSGCAQGTAFGDVMEVFETVTLNPDVRLRTSWIYALSKKINLTPSLYLEAGAIHG 166
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: A0A848Z9Q2_9PROT (Sulfur carrier protein FdhD n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z9Q2_9PROT) HSP 1 Score: 234 bits (596), Expect = 1.200e-74 Identity = 117/159 (73.58%), Postives = 133/159 (83.65%), Query Frame = 1
Query: 10 LIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
+ P+PDDPRLTE V G+DQ+G VE+ V VERPLTLFLNG+EIVTMMTI D+PDYLA+GYL NQNML PDD +T ID+DDD+ VVVRT+R TDYEE+LKKKTLTSGCAQGTVFGD+MESFE V L ARLHTS LY L++ IN PSLYL AGAIHG
Sbjct: 6 IRPDPDDPRLTERVRGVDQEGRPVETSVTVERPLTLFLNGREIVTMMTIADHPDYLALGYLLNQNMLRPDDRVTAIDYDDDIETVVVRTERVTDYEEKLKKKTLTSGCAQGTVFGDVMESFEQVRLPKAARLHTSWLYTLSRKINQSPSLYLAAGAIHG 164
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Match: UPI00187223CE (formate dehydrogenase accessory sulfurtransferase FdhD n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI00187223CE) HSP 1 Score: 234 bits (598), Expect = 1.290e-74 Identity = 122/159 (76.73%), Postives = 132/159 (83.02%), Query Frame = 1
Query: 10 LIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLANQNMLLPDDTITGIDHDDDLGVVVVRTDRTTDYEERLKKKTLTSGCAQGTVFGDLMESFEGVELNTDARLHTSSLYALTKAINTMPSLYLTAGAIHG 486
L P+PDDPRLTE V G+DQDG VE+ VVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYL NQNML PDD I GID+D++L VVVVRT+R TDYEE+LKKK TSGCAQGTVFGDLME FE V L DA L TS L +L+K IN PSLYL AGAIHG
Sbjct: 31 LRPDPDDPRLTERVEGVDQDGKAVETAVVVERPLTLFLNGQEIVTMMTIGDYPDYLAVGYLLNQNMLRPDDVIEGIDYDEELEVVVVRTERETDYEEKLKKKVRTSGCAQGTVFGDLMEKFETVMLPQDAVLKTSWLVSLSKKINAAPSLYLEAGAIHG 189 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102283.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102283.1.1 >prot_L-digitata_M_contig102283.1.1 ID=prot_L-digitata_M_contig102283.1.1|Name=mRNA_L-digitata_M_contig102283.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=162bp MSSLIPNPDDPRLTEPVSGIDQDGNTVESRVVVERPLTLFLNGQEIVTMMback to top mRNA from alignment at L-digitata_M_contig102283:2..487- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102283.1.1 ID=mRNA_L-digitata_M_contig102283.1.1|Name=mRNA_L-digitata_M_contig102283.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=486bp|location=Sequence derived from alignment at L-digitata_M_contig102283:2..487- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102283:2..487- >mRNA_L-digitata_M_contig102283.1.1 ID=mRNA_L-digitata_M_contig102283.1.1|Name=mRNA_L-digitata_M_contig102283.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=486bp|location=Sequence derived from alignment at L-digitata_M_contig102283:2..487- (Laminaria digitata LdigPH10_18mv male)back to top |