mRNA_L-digitata_M_contig102281.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A2E3AVH0_9PROT (Gluconolaconase n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A2E3AVH0_9PROT) HSP 1 Score: 350 bits (898), Expect = 4.120e-120 Identity = 161/186 (86.56%), Postives = 175/186 (94.09%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPI+AST+AL+DGSILMAGD+EIGVYDPSTEAY+RLAVL EP+TNRTNDGGIAPDGSLWFGTMD++ K +G YYKFS G ++ALRLPSVL+TNTFQFSPDG KFYTCDSAEQEILSFDH+LETGKL+GR V
Sbjct: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIRASTIALHDGSILMAGDQEIGVYDPSTEAYERLAVLQGEPETNRTNDGGIAPDGSLWFGTMDDAGKAAQGNYYKFSPGGRIEALRLPSVLMTNTFQFSPDGTKFYTCDSAEQEILSFDHELETGKLTGRMV 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A059DX92_9PROT (SGL domain-containing protein n=2 Tax=Hyphomonas TaxID=85 RepID=A0A059DX92_9PROT) HSP 1 Score: 326 bits (836), Expect = 1.150e-110 Identity = 144/186 (77.42%), Postives = 168/186 (90.32%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHR+NPRTGNTRRYDLPI+ASTLAL+DG+ILMAG+REIG+YDP+TEAY+RL L EP +NRTNDGGIAPDGS WFGTMD+++K +G YY+++ DG ++ LRLPSV+ITNTFQFSPDG FYTCDS EQE+LSF H++ TGK++ RKV
Sbjct: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRYNPRTGNTRRYDLPIRASTLALFDGNILMAGEREIGIYDPATEAYERLRTLDAEPISNRTNDGGIAPDGSFWFGTMDDAQKVAQGNYYRYTSDGKLEPLRLPSVMITNTFQFSPDGSVFYTCDSVEQEVLSFQHEIGTGKVTDRKV 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A062UGL0_9PROT (SGL domain-containing protein n=3 Tax=Hyphomonas TaxID=85 RepID=A0A062UGL0_9PROT) HSP 1 Score: 320 bits (819), Expect = 4.300e-108 Identity = 139/186 (74.73%), Postives = 166/186 (89.25%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
M +TPECVAPTGC LGEGP+WSP+EGFLWWVDIKRAKLHR+NP+TGNTRRYDLPI+AS LAL+DG +LMAGD+EIG+YDP+TEAY+R L++EP+TNRTNDGGIAPDGS WFGTMD+ EK+ +GGY++ D + LRLPSV++TNT QFSPDGR FYTCDSAEQEIL+FDHDLETG L+GR++
Sbjct: 1 MIVTPECVAPTGCALGEGPVWSPTEGFLWWVDIKRAKLHRYNPKTGNTRRYDLPIRASALALHDGCLLMAGDQEIGLYDPATEAYERWCTLSDEPETNRTNDGGIAPDGSFWFGTMDDREKDAQGGYFRLGPDRKLTQLRLPSVMVTNTMQFSPDGRTFYTCDSAEQEILAFDHDLETGTLTGRRL 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A059FVM2_9PROT (Senescence marker protein-30 family protein n=1 Tax=Hyphomonas johnsonii MHS-2 TaxID=1280950 RepID=A0A059FVM2_9PROT) HSP 1 Score: 317 bits (813), Expect = 3.400e-107 Identity = 139/186 (74.73%), Postives = 161/186 (86.56%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
M MTPECVAPTGC LGEGP+WSPSEGFLWWVDIKRAKLHR+NPRTGNTRRYDLPI+AS LAL+DG +LMAGD+EIG+YDP+TE Y+R L+ EP+TNRTNDGG+APDGS WFGTMD+ E+E G Y++ D V +RLPSV++TNT QFSPDGR FYTCDSAEQEIL+FDHD ETG L+GR+V
Sbjct: 1 MLMTPECVAPTGCALGEGPVWSPSEGFLWWVDIKRAKLHRYNPRTGNTRRYDLPIRASALALHDGCLLMAGDQEIGLYDPATEGYERWCTLSGEPETNRTNDGGVAPDGSFWFGTMDDKEREATGSYFRLGADRQVSPVRLPSVMVTNTMQFSPDGRTFYTCDSAEQEILAFDHDSETGTLTGRRV 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A0F2REM5_9PROT (SGL domain-containing protein n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2REM5_9PROT) HSP 1 Score: 315 bits (806), Expect = 4.070e-106 Identity = 138/186 (74.19%), Postives = 161/186 (86.56%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
M +TPECVAPTGC LGEG +WSPSEGFLWWVDIKRAKLHR+NP+TGNTRRYDLPI+AS LAL+DG +LMAGDRE+G+YDP+TEAY+R L EP TNRTNDGG+APDGS WFGTMD+ EK+P G Y++ + D + +RLPSVL+TNT QFSPDGR FYTCDSAEQEIL+FDHDLE G L+GR+V
Sbjct: 1 MLITPECVAPTGCVLGEGAVWSPSEGFLWWVDIKRAKLHRYNPKTGNTRRYDLPIRASALALHDGCLLMAGDREVGLYDPATEAYERWCELPGEPDTNRTNDGGVAPDGSFWFGTMDDREKDPIGSYFRLTPDRKISQMRLPSVLVTNTMQFSPDGRTFYTCDSAEQEILAFDHDLEAGTLTGRRV 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A062U5T5_9PROT (SGL domain-containing protein n=2 Tax=Hyphomonas TaxID=85 RepID=A0A062U5T5_9PROT) HSP 1 Score: 313 bits (803), Expect = 1.160e-105 Identity = 133/186 (71.51%), Postives = 163/186 (87.63%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
M +TPECVAPTGC LGEGPLWSPSEGFLWWVD+KRAKLHR+NPRTGNTRRYDLPIKA+ +ALY G++LM GDREIG+YDPSTE Y+RL L +EP+ NRTNDGG+APDGS WFGTMD+ E+E +G YY++S DG + LRLPSV++TNTFQFSP+G+ FYTCDSAEQE+L++D++ + L+GR+V
Sbjct: 1 MIITPECVAPTGCMLGEGPLWSPSEGFLWWVDVKRAKLHRYNPRTGNTRRYDLPIKATAMALYGGNLLMVGDREIGIYDPSTEGYERLTALEDEPEGNRTNDGGVAPDGSFWFGTMDDQEREAQGQYYRYSADGKLSQLRLPSVMVTNTFQFSPNGKTFYTCDSAEQEVLAYDYEADGNNLTGRRV 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A0F2QGZ9_9PROT (SGL domain-containing protein n=1 Tax=Hyphomonadaceae bacterium BRH_c29 TaxID=1629720 RepID=A0A0F2QGZ9_9PROT) HSP 1 Score: 312 bits (800), Expect = 3.330e-105 Identity = 140/186 (75.27%), Postives = 159/186 (85.48%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
M + PECVAPTGC LGEGPLWS +EGFLWWVDIKRAKLHR+NPRTGNTRRYDLPI+AST+ALY G LMAGD+EIGVYDPSTE YDR+ L EP NRTNDGG+APDGS WFGTMD+SE+E +G Y++F D S+ LRLPSV++TNT QFSPDGR FYTCDSAEQEIL++D D ETG LSGR+V
Sbjct: 1 MMLAPECVAPTGCVLGEGPLWSETEGFLWWVDIKRAKLHRYNPRTGNTRRYDLPIRASTIALYQGQFLMAGDQEIGVYDPSTEIYDRICQLEGEPAGNRTNDGGVAPDGSFWFGTMDDSEREARGSYFRFGPDKSLTQLRLPSVMMTNTMQFSPDGRTFYTCDSAEQEILAYDFDPETGALSGRRV 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A059DTH4_9PROT (SGL domain-containing protein n=5 Tax=Hyphomonas TaxID=85 RepID=A0A059DTH4_9PROT) HSP 1 Score: 304 bits (779), Expect = 5.360e-102 Identity = 131/186 (70.43%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
M + PECVAPTGC LGEGP+WS +EGFLWWVDIKRAKLHR+NPRTGNTRRYDLP++AS ALY+G+ LM GD+EIGVYDP+TE YDR+ + EP+ NRTNDGG+APDGS WFGTMD++EKE +G Y+++ D ++ LRLPSV++TNT QFSPDGR FYTCDS EQEIL++D D ETG LSGR+V
Sbjct: 1 MMLAPECVAPTGCVLGEGPVWSETEGFLWWVDIKRAKLHRYNPRTGNTRRYDLPLRASAFALYEGNFLMVGDQEIGVYDPATEVYDRILKIEGEPEGNRTNDGGVAPDGSFWFGTMDDAEKEARGSYFRYGADQTLTQLRLPSVMVTNTMQFSPDGRTFYTCDSTEQEILAYDFDPETGSLSGRRV 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A259LVX7_9PROT (SGL domain-containing protein n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259LVX7_9PROT) HSP 1 Score: 301 bits (770), Expect = 1.170e-100 Identity = 131/186 (70.43%), Postives = 158/186 (84.95%), Query Frame = 1
Query: 1 MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
M ++PECVAPTGC GE PLWSP+EGFLWWVD++RAKLHR+NP+TGNTRRYDLP+KAS+LALY G +LMA DREIG +DP+ EAY+RL +L +EP TNRT+DGG+APDGS WFGTMDE+E++P G YY++ D SV LRLPSVL+T T QFSPDGR FYTCD+AE EIL+FD + ETG LSGR+
Sbjct: 1 MILSPECVAPTGCMQGEAPLWSPTEGFLWWVDVRRAKLHRYNPKTGNTRRYDLPVKASSLALYGGHLLMAADREIGFFDPANEAYERLCILPDEPATNRTSDGGVAPDGSFWFGTMDEAERDPSGVYYRYGQDKSVTQLRLPSVLVTKTMQFSPDGRTFYTCDTAEAEILAFDVNPETGALSGRRT 186
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Match: A0A059F6M1_9PROT (Senescence marker protein-30 family protein n=3 Tax=Hyphomonas TaxID=85 RepID=A0A059F6M1_9PROT) HSP 1 Score: 300 bits (767), Expect = 3.460e-100 Identity = 130/185 (70.27%), Postives = 153/185 (82.70%), Query Frame = 1
Query: 4 FMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRYDLPIKASTLALYDGSILMAGDREIGVYDPSTEAYDRLAVLAEEPKTNRTNDGGIAPDGSLWFGTMDESEKEPKGGYYKFSLDGSVDALRLPSVLITNTFQFSPDGRKFYTCDSAEQEILSFDHDLETGKLSGRKV 558
+ PECVAPTGC LG GP+WS +EGFLWWVD+KRAKLHR+NPRTGNTRRYDLP++AS +ALY+GS LM GDRE+GVYDPSTE YD L + EP+ NRTNDGG+APDGS WFGTMD+ EK+ G YY+F D ++ LRLPSVL TNT QFSPDG+ FYTCDSAEQEIL+FD D TG L+GR++
Sbjct: 1 MLAPECVAPTGCVLGNGPVWSETEGFLWWVDVKRAKLHRYNPRTGNTRRYDLPLRASAIALYEGSFLMVGDREVGVYDPSTEVYDTLLSVETEPEGNRTNDGGVAPDGSFWFGTMDDQEKDASGSYYRFGPDKALSQLRLPSVLATNTMQFSPDGKTFYTCDSAEQEILAFDFDQATGALTGRRI 185 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102281.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102281.2.1 >prot_L-digitata_M_contig102281.2.1 ID=prot_L-digitata_M_contig102281.2.1|Name=mRNA_L-digitata_M_contig102281.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=186bp MFMTPECVAPTGCTLGEGPLWSPSEGFLWWVDIKRAKLHRFNPRTGNTRRback to top mRNA from alignment at L-digitata_M_contig102281:356..913+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102281.2.1 ID=mRNA_L-digitata_M_contig102281.2.1|Name=mRNA_L-digitata_M_contig102281.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=558bp|location=Sequence derived from alignment at L-digitata_M_contig102281:356..913+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102281:356..913+ >mRNA_L-digitata_M_contig102281.2.1 ID=mRNA_L-digitata_M_contig102281.2.1|Name=mRNA_L-digitata_M_contig102281.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=558bp|location=Sequence derived from alignment at L-digitata_M_contig102281:356..913+ (Laminaria digitata LdigPH10_18mv male)back to top |