mRNA_L-digitata_M_contig102221.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A7Y2DR77_9BACT (Isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7Y2DR77_9BACT) HSP 1 Score: 142 bits (359), Expect = 2.150e-38 Identity = 74/175 (42.29%), Postives = 114/175 (65.14%), Query Frame = 3
Query: 324 MTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALPSF---HPKQGWLGITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
M FL Y + + +AFV+ +Y V++ +G+NP+ + D+AH Y+G LF +++ + +LV +F P++Y LP F +P + G+ L+L++ +AQ+QMG SWRIGID + +T+LV GLFRFSRNPIFL M V + G F+ +PN TL++L++ + IQ QVRLE
Sbjct: 1 MRYFLFAYLLIYFTIAFVIPTYRVWKRSGVNPITFRSADTAHDYIGKLFKIVMVSLVVVVLVYSFF--PKIYSFLLPVFWLEYPLVRYTGVILLLLSLGWTVIAQLQMGNSWRIGIDEEKQTDLVQTGLFRFSRNPIFLGMIVTIFGFFMTIPNAFTLVILLIGFVLIQIQVRLE 173
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A7Y5CUB6_9BACT (Isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5CUB6_9BACT) HSP 1 Score: 137 bits (345), Expect = 2.950e-36 Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 3
Query: 321 IMTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALPSFHPKQGWL---GITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
I+ L Y I ++ AF RS++V++ TG+NP V D+AH +VGMLF ++ + A +++ A Q Y H P F ++ L G+ L+ +F LAQ QMG SWRIGID +T L+THG+FR+SRNPIFL M+V LLGLFL LPN T +L++ +Q QVRLE
Sbjct: 4 ILRYVLPIYLIVYLTFAFFWRSFLVWKRTGVNPYVLGKTDNAHDFVGMLFRFTLIAIVAVVILH--AASNQAYQHLAPIFWLERQALQHAGLFLLAASFIWTLLAQAQMGNSWRIGIDVNAKTPLITHGVFRWSRNPIFLGMRVTLLGLFLILPNAVTFALLLLGDALMQIQVRLE 177
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A3D2US79_9CHLR (Isoprenylcysteine carboxylmethyltransferase family protein n=3 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A3D2US79_9CHLR) HSP 1 Score: 135 bits (339), Expect = 2.060e-35 Identity = 81/175 (46.29%), Postives = 110/175 (62.86%), Query Frame = 3
Query: 324 MTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALP-SFHPKQ--GWLGITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
M IFL+ YFI F+ +A +L +Y +++ TG+NP + D+AH Y+G F ++L +V FA P +Y + LP SF +G L+LIA + +AQV M +SWRIGID +TELV GLF+ SRNPIFL M+V LLGLFL +PN TL +L+ + IQ QVRLE
Sbjct: 1 MKIFLLLYFILFLGLAMILPTYRIWKTTGVNPYKLGSSDTAHDYIGKNFRLIMLVCFLVAIV--FAVSPNLYSYLLPISFLTNNILANIGFVLLLIALVWVLIAQVHMQKSWRIGIDEDVKTELVQTGLFKISRNPIFLGMRVMLLGLFLIIPNAITLTILITGEMLIQTQVRLE 173
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A7Y2D255_9BACT (Isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7Y2D255_9BACT) HSP 1 Score: 134 bits (337), Expect = 4.590e-35 Identity = 79/177 (44.63%), Postives = 112/177 (63.28%), Query Frame = 3
Query: 321 IMTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFG-ALILGVSATLLVQTFADDPQVYLHALPSFHPKQGWL---GITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
++ I L YF+AF +AF RSY VY+ TGINP V DSA+ ++G+ F +L+L V+ +V F+ P++Y +A P + WL G LM ++ +A+AQ QMGRSWR+GID +N+T+LV GLF++SRNPIFL M+ LG FL +PN T ++ I + QVRLE
Sbjct: 4 VLRIGLPVYFVAFFVIAFFWRSYQVYKQTGINPYVFGKTDSAYDFIGVGFRLSLLLNVA---VVSIFSFFPRLYEYAAPIIWLEHEWLKAVGFGLMCVSLIWIAVAQGQMGRSWRVGIDKENKTDLVEEGLFKYSRNPIFLGMRFTGLGFFLAIPNAITFGTFLMGDILMNVQVRLE 177
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A1M3EDZ8_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium 43-16 TaxID=1895923 RepID=A0A1M3EDZ8_9BACT) HSP 1 Score: 132 bits (331), Expect = 3.480e-34 Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = 3
Query: 318 TIMTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALPSFHPKQG-WLGITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
+ + ++L YFIA++ +AF+ SY YR TGINPV D+AH Y+G + LI+ + ++++ +F YL + + G+ LM ++ +A+AQ QM +SWRIGID ++TEL+T GLFR+SRNPIFL M V++ G+FL LPN T +L + I Q+RLE
Sbjct: 2 SFLQLYLPLYFIAYLTLAFIWPSYRTYRQTGINPVTFGKTDNAHDYIGRVMKLLIVLLMVSIIIFSFIPSRYTYLGPITVLEQAACFYTGLILMHLSLIWIAVAQYQMNKSWRIGIDEVHKTELITRGLFRYSRNPIFLGMIVSVSGVFLVLPNTLTFCILFSTYFIIHIQIRLE 176
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A3G8YA26_9FLAO (Isoprenylcysteine carboxylmethyltransferase family protein n=6 Tax=root TaxID=1 RepID=A0A3G8YA26_9FLAO) HSP 1 Score: 131 bits (330), Expect = 4.900e-34 Identity = 76/175 (43.43%), Postives = 111/175 (63.43%), Query Frame = 3
Query: 324 MTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALP-SFHPKQGWLGITLMLIAFFVL--ALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
+ +L Y + +M VAFVL SY Y+ TGINPV D+AH +G + LI + + + +F+D ++Y + +P S+ K +L I L+LI F +L ++AQ QM SWRIGID N+TEL+T GLF +SRNPIFL M +++ G+F LPN T +++ +I IQ Q+RLE
Sbjct: 4 LKFYLPVYLVLYMMVAFVLPSYRTYKQTGINPVTFGKTDNAHDCIGFVMKVLIALLFVAVFIYSFSD--KIYQYLVPISYLMKDVFLIIGLILIHFSLLWISVAQYQMSNSWRIGIDENNKTELITKGLFSYSRNPIFLGMIISVAGIFFILPNALTFFLMLTTYIVIQIQIRLE 176
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A7W8LQ29_9DEIO (Protein-S-isoprenylcysteine O-methyltransferase Ste14 n=1 Tax=Deinococcus budaensis TaxID=1665626 RepID=A0A7W8LQ29_9DEIO) HSP 1 Score: 131 bits (330), Expect = 5.480e-34 Identity = 76/169 (44.97%), Postives = 102/169 (60.36%), Query Frame = 3
Query: 336 LVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALPSFH-PKQGWLGITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
L+ Y + ++ VAFV RS +V++ TGINP V A DSAH YVG L+L ++ +LV T + +L L + P W G L+L + +ALAQ +G SWRIG+D T LV HG+F SRNPIFL M++ LLG+ L PN TL +LV + +Q QVRLE
Sbjct: 12 LLVYLLVYVLVAFVWRSVLVWKRTGINPYVLSADDSAHGYVGRAMRLLMLSLALAILVLTVFPEASTWLGTLSALTIPGVVWTGWVLLLTSLGWIALAQAHLGASWRIGVDESARTALVQHGIFARSRNPIFLGMRLNLLGILLVAPNALTLAILVAGEVLMQVQVRLE 180
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A2E0ZJF8_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZJF8_9CHLR) HSP 1 Score: 131 bits (330), Expect = 7.200e-34 Identity = 80/174 (45.98%), Postives = 108/174 (62.07%), Query Frame = 3
Query: 324 MTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDP-QVYLHALPSFHPKQGW-LGITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
M +F++ Y I F +AF RSY+ +RATG+NP D ++G L+ + LG A +L+ A YL L +G+TL+++AF + +AQV MG SWRIGID +NET LVT GLFRFSRNPIFL M++ LLGLFL +PN TL + ++ +AIQ QV LE
Sbjct: 1 MKLFILIYLILFYGLAFFWRSYVTWRATGVNPYRLTQTDGLMSFLGRLYRLVSLGSVAAVLLYILAPTRWYAYLGPLTWLEGAAVTAVGVTLLVLAFIWVLVAQVHMGNSWRIGIDEENETTLVTGGLFRFSRNPIFLGMRLNLLGLFLVMPNALTLALWLLGDVAIQMQVFLE 174
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: A0A4Q5YJI6_9BACT (Isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q5YJI6_9BACT) HSP 1 Score: 131 bits (330), Expect = 8.700e-34 Identity = 81/187 (43.32%), Postives = 108/187 (57.75%), Query Frame = 3
Query: 288 AARRRPRSEGTIMTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALPSFHPKQG---WLGITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
AA + + T + F +FIA+ AFV S VY+ TG NPV D+AH ++G F L+ V+ TL + FA + Y + LP+ + +Q W+G+ L L++ +AQ QMG SWRIGID ++ LVT GLF SRNPIFL MQ+ LLGLFL PN T VL+ + IQ Q RLE
Sbjct: 13 AATKATEMDTTTLRYFAPLFFIAYFGAAFVWPSLRVYQKTGKNPVTFGGADTAHDFIGTSFKVLLALVAGTLCL--FASGSETYSYLLPAHYLEQPLVQWIGVALCLLSLGWTLIAQWQMGTSWRIGIDGRDPGALVTKGLFARSRNPIFLGMQITLLGLFLITPNALTAAVLISGWLLIQIQARLE 197
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Match: UPI0004274D6C (isoprenylcysteine carboxylmethyltransferase family protein n=1 Tax=Algoriphagus mannitolivorans TaxID=226504 RepID=UPI0004274D6C) HSP 1 Score: 130 bits (327), Expect = 1.190e-33 Identity = 71/173 (41.04%), Postives = 111/173 (64.16%), Query Frame = 3
Query: 330 IFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGALILGVSATLLVQTFADDPQVYLHALPSFH---PKQGWLGITLMLIAFFVLALAQVQMGRSWRIGIDAKNETELVTHGLFRFSRNPIFLTMQVALLGLFLCLPNIGTLLVLVVAHIAIQFQVRLE 839
+FL TYF+ + + FV+RS ++++ TGINP+ + D AH + G +F ++ + L+V +A P Y + LP ++ P +G L++++ V+ +AQ M SWRIGID N+ ELVTHGLF SRNPIFL + +A +GLF+ +PN TLL++ ++ I+I Q+RLE
Sbjct: 1 MFLFTYFLLYFLLVFVVRSVLLWKKTGINPLTFNKTDDAHGFNGKVF--TVISIIELLVVGIYAFQPDWYQYLLPFWYLENPILQKIGWGLLILSLVVVWIAQTHMANSWRIGIDESNKAELVTHGLFSVSRNPIFLGIMIANIGLFMVIPNAFTLLIISLSTISINTQIRLE 171 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102221.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102221.1.1 >prot_L-digitata_M_contig102221.1.1 ID=prot_L-digitata_M_contig102221.1.1|Name=mRNA_L-digitata_M_contig102221.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=172bp MTIFLVTYFIAFMAVAFVLRSYMVYRATGINPVVRHAPDSAHMYVGMLFGback to top mRNA from alignment at L-digitata_M_contig102221:75..913+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102221.1.1 ID=mRNA_L-digitata_M_contig102221.1.1|Name=mRNA_L-digitata_M_contig102221.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=839bp|location=Sequence derived from alignment at L-digitata_M_contig102221:75..913+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102221:75..913+ >mRNA_L-digitata_M_contig102221.1.1 ID=mRNA_L-digitata_M_contig102221.1.1|Name=mRNA_L-digitata_M_contig102221.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=516bp|location=Sequence derived from alignment at L-digitata_M_contig102221:75..913+ (Laminaria digitata LdigPH10_18mv male)back to top |