mRNA_L-digitata_M_contig102211.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: A0A7X9DZR4_9DELT (Elongation factor Ts n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A7X9DZR4_9DELT) HSP 1 Score: 232 bits (592), Expect = 1.080e-74 Identity = 109/179 (60.89%), Postives = 147/179 (82.12%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAMNAAAA 537
L++KG+A+ GKKA RVA+EG V SY+H+GGKIGVLVEVNCETDFVARG+ F F K++AMQ+AAA P+Y+ RE VP VV ++ +++ QVIE GKPEK+ADKIV+G++NKWY+E CL++QP+++E +++ LR ++V K GENVT+RRF R++LGEGIEK+ DLAAEVAA A+A
Sbjct: 40 LREKGIAQAGKKASRVAAEGKVESYLHMGGKIGVLVEVNCETDFVARGEAFQAFCKEIAMQVAAANPQYVTREEVPAQVVEAEKAIYRKQVIESGKPEKVADKIVEGRLNKWYAEFCLLDQPWIREQDKTIDQLRKELVAKTGENVTIRRFARFQLGEGIEKKKSDLAAEVAAQLQASA 218
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: A0A117M327_9FIRM (Elongation factor Ts n=1 Tax=Pelotomaculum thermopropionicum TaxID=110500 RepID=A0A117M327_9FIRM) HSP 1 Score: 223 bits (569), Expect = 3.260e-71 Identity = 101/174 (58.05%), Postives = 142/174 (81.61%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAM 522
L++KGLA KKAGR+A+EG V +YIH G+IGVLVE+NCETDFVA+ D+F FTKD+AMQIAA++P+++ RE++P D +AK+R++ + Q + +GKPEKI +K+VDG++ K+Y E+CL+EQPF+K+P ++V L + + K GEN+TVRRFTRYE+GEGI K+ DLAAEV A+
Sbjct: 40 LREKGLAAAAKKAGRIAAEGRVEAYIHGAGRIGVLVEINCETDFVAKTDEFKNFTKDIAMQIAASKPDFVRREDMPADFIAKEREILRAQALNEGKPEKIVEKMVDGRLEKYYKEVCLLEQPFIKDPDITVGQLLTEKISKIGENITVRRFTRYEMGEGITKKQADLAAEVEAV 213
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: UPI0004E20E39 (translation elongation factor Ts n=1 Tax=Desulfofalx alkaliphila TaxID=105483 RepID=UPI0004E20E39) HSP 1 Score: 223 bits (568), Expect = 4.480e-71 Identity = 103/174 (59.20%), Postives = 140/174 (80.46%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAM 522
L++KGLA KKA R+ +EG V SYIH GG+IGVLVEVNCETDFVA+ DDF + +D+AMQIAA++PEY++RE VP +V+ K++++ + Q + +GKPEKI +K+V G+I+K+Y EICL+EQPF+K+P ++V+ L + + K GEN++VRRF RYELGEGIEKR D AAEVAA
Sbjct: 41 LREKGLAAAAKKASRITAEGLVESYIHAGGRIGVLVEVNCETDFVAKTDDFKDLVRDIAMQIAASKPEYVSREEVPSEVIEKEKEVLRAQALNEGKPEKIVEKMVQGRIDKYYKEICLLEQPFIKDPDVTVQQLVTEKIAKIGENISVRRFVRYELGEGIEKRQEDFAAEVAAQ 214
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: A0A661P0Q8_9DELT (Elongation factor Ts n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661P0Q8_9DELT) HSP 1 Score: 223 bits (568), Expect = 4.940e-71 Identity = 104/174 (59.77%), Postives = 144/174 (82.76%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAM 522
L++KG+A K+AGRVA+EG V +YIH+GG+IGVLVEVNCETDFVARG+DF F ++VAMQ+AAA P+YL+R++VP +VV ++ +++ Q E GKPEKI D+I +G++ K++SE+CL++QP+++E KM+V+ LR ++V K GENV VRRF R+ELGEGIEK+ DLAAEVAA
Sbjct: 40 LREKGMASASKRAGRVAAEGQVEAYIHMGGRIGVLVEVNCETDFVARGEDFKNFCREVAMQVAAANPQYLSRDDVPAEVVEAEKQIYRKQAQESGKPEKIWDQIAEGRLKKFFSEVCLLDQPYIREQKMTVDKLRQELVAKTGENVVVRRFARFELGEGIEKKKSDLAAEVAAQ 213
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: C0GIU3_9FIRM (Elongation factor Ts n=1 Tax=Dethiobacter alkaliphilus AHT 1 TaxID=555088 RepID=C0GIU3_9FIRM) HSP 1 Score: 223 bits (567), Expect = 5.950e-71 Identity = 102/174 (58.62%), Postives = 140/174 (80.46%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAM 522
L++KGLA KKAGR+A+EG VH+YIH+GGKIGVLVEVNCETDFVAR DDF +F +DVAMQIAA P+YL+RE VPE+++ K+R++ + Q + +GKPEK+ +KI+ G+I K+Y+E CL+EQ F+++ S+ DL + K GEN+++RRFTRYE+GEG+EK+ +LA EVA M
Sbjct: 39 LREKGLAAAAKKAGRIAAEGIVHAYIHMGGKIGVLVEVNCETDFVARTDDFQDFVRDVAMQIAATNPQYLSREEVPEEMLEKEREILRAQALNEGKPEKVVEKIIAGRIEKYYAENCLLEQAFIRDTDKSITDLLKDKIAKIGENISIRRFTRYEMGEGLEKKGCNLAEEVAQM 212
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: R4KNR8_9FIRM (Elongation factor Ts n=2 Tax=Desulfallaceae TaxID=2867375 RepID=R4KNR8_9FIRM) HSP 1 Score: 223 bits (567), Expect = 6.150e-71 Identity = 105/174 (60.34%), Postives = 137/174 (78.74%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAM 522
L++KGLA KK+GR+ +EG V SYIH GGKIGVLVEVNCETDFVA+ D+F E +D+AMQIAAARP+Y+ARE VPE +V K+R++ Q +GKPEKI +K+V+G+I K+Y EICL+EQPF+K+P +++ L + + K GEN++VRRF RYELGEG+EKR D AAEV A
Sbjct: 41 LREKGLASAAKKSGRITAEGLVESYIHAGGKIGVLVEVNCETDFVAKTDEFKELVRDIAMQIAAARPQYVAREEVPESMVVKEREILAAQAANEGKPEKIIEKMVEGRIEKFYKEICLLEQPFIKDPDKTIKQLVTEKIAKIGENISVRRFVRYELGEGLEKRQDDFAAEVMAQ 214
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: A0A424YED0_9FIRM (Elongation factor Ts n=1 Tax=Candidatus Syntrophonatronum acetioxidans TaxID=1795816 RepID=A0A424YED0_9FIRM) HSP 1 Score: 222 bits (565), Expect = 1.280e-70 Identity = 102/174 (58.62%), Postives = 141/174 (81.03%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAM 522
L++KGL+ KK+GR+ SEG V SYIH+GGKIGVLVEVNCETDFVA+ D+F +F K++ MQIAAA P+Y++R+ VP +VV K+ ++FK Q I++GKPEK+ D+I++GKI K+Y EICL+EQ F+++ + V +L + + K GENVT+RRFTRYE+GEG+EK+ DLAAEV A+
Sbjct: 41 LREKGLSAAVKKSGRITSEGLVDSYIHMGGKIGVLVEVNCETDFVAKNDEFKQFVKNITMQIAAANPQYISRDEVPREVVDKEAEIFKAQAIKEGKPEKVIDRIIEGKIEKYYEEICLLEQAFIRDSDIKVSELLKETIAKLGENVTIRRFTRYEMGEGLEKKKDDLAAEVEAI 214
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: A0A7X9BDY6_9FIRM (Elongation factor Ts n=1 Tax=Peptococcaceae bacterium TaxID=2052179 RepID=A0A7X9BDY6_9FIRM) HSP 1 Score: 222 bits (565), Expect = 1.320e-70 Identity = 104/172 (60.47%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVA 516
L++KGLA KKAGRVA+EG V SYIH GG+IGVLVEVNCETDFVA+ D+F KD+AMQIAAA+PEY+ +E+VPE+ V ++ + + Q + +GKPEKI DK+V+G+I K+Y E+CL+EQPF+KEP ++++ L + K GEN+++RRF RYELGEGIEK DLAAEVA
Sbjct: 40 LREKGLAAAAKKAGRVAAEGLVESYIHGGGRIGVLVEVNCETDFVAKTDEFKSLVKDIAMQIAAAKPEYIRKEDVPEEAVEHEKAVLRAQALNEGKPEKIVDKMVEGRIEKYYKEVCLLEQPFIKEPDLTIKQLLTDKIAKIGENISIRRFARYELGEGIEKAQTDLAAEVA 211
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: D5XEZ3_THEPJ (Elongation factor Ts n=2 Tax=Thermincola TaxID=278993 RepID=D5XEZ3_THEPJ) HSP 1 Score: 221 bits (564), Expect = 1.650e-70 Identity = 103/174 (59.20%), Postives = 139/174 (79.89%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEVAAM 522
L++KGLA KKAGR+A+EG V SYIH GGKIGVLVEVNCETDFVA+ D+F F +DVAMQIAAA+PEY+ RE VPE++V K++++ + Q + +GKPE I DK+V+G+I K++ E+CLMEQPF+K+P +++E L + V K GE +++RRF RYE+GEG+EKR + A EVAA
Sbjct: 39 LREKGLAAAAKKAGRIAAEGIVDSYIHAGGKIGVLVEVNCETDFVAKTDEFKSFVRDVAMQIAAAKPEYVRREEVPEEIVQKEKEILRAQALNEGKPEAIVDKMVNGRIEKFFKEVCLMEQPFIKDPDLTIEQLLNEKVAKIGEKISIRRFVRYEMGEGLEKRQDNFAEEVAAQ 212
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Match: T2RM90_9FIRM (Elongation factor Ts n=6 Tax=Dehalobacter TaxID=56112 RepID=T2RM90_9FIRM) HSP 1 Score: 221 bits (564), Expect = 1.760e-70 Identity = 104/171 (60.82%), Postives = 139/171 (81.29%), Query Frame = 1
Query: 1 LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDFMEFTKDVAMQIAAARPEYLARENVPEDVVAKQRDLFKGQVIEQGKPEKIADKIVDGKINKWYSEICLMEQPFVKEPKMSVEDLRAQVVQKCGENVTVRRFTRYELGEGIEKRSVDLAAEV 513
L++KGLA KK GR+A+EGTV +YIH GG+IGVL+E+NCETDFV+RGD+F + TKD+AMQIAAA+P Y+ +E+VP DVVA +R++F+ Q + +GKPEKI DK+VDG+I K+Y E+CL+EQPF+K+P + V+DL + K GE + +RRFTRYELGEGIEKR + A EV
Sbjct: 41 LREKGLAAAAKKEGRIAAEGTVEAYIHGGGRIGVLLELNCETDFVSRGDEFKQLTKDIAMQIAAAKPLYVNKEDVPADVVAHEREIFRAQALNEGKPEKIVDKMVDGRIEKFYKEVCLVEQPFIKDPDVLVKDLVMAKIAKIGEKIAIRRFTRYELGEGIEKRQDNFADEV 211 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102211.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102211.1.1 >prot_L-digitata_M_contig102211.1.1 ID=prot_L-digitata_M_contig102211.1.1|Name=mRNA_L-digitata_M_contig102211.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=183bp LQKKGLAEVGKKAGRVASEGTVHSYIHLGGKIGVLVEVNCETDFVARGDDback to top mRNA from alignment at L-digitata_M_contig102211:1..549+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102211.1.1 ID=mRNA_L-digitata_M_contig102211.1.1|Name=mRNA_L-digitata_M_contig102211.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=549bp|location=Sequence derived from alignment at L-digitata_M_contig102211:1..549+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102211:1..549+ >mRNA_L-digitata_M_contig102211.1.1 ID=mRNA_L-digitata_M_contig102211.1.1|Name=mRNA_L-digitata_M_contig102211.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=549bp|location=Sequence derived from alignment at L-digitata_M_contig102211:1..549+ (Laminaria digitata LdigPH10_18mv male)back to top |