mRNA_L-digitata_M_contig1022.1.2 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig1022.1.2
Unique NamemRNA_L-digitata_M_contig1022.1.2
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A835ZFY6_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY6_9STRA)

HSP 1 Score: 416 bits (1070), Expect = 1.370e-139
Identity = 225/316 (71.20%), Postives = 261/316 (82.59%), Query Frame = 3
Query:   99 RHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            R ASTLV+AEH+N ALSP +LSAVTAA ++ G+V LLVLG  +  VA+ A+KV GV+KVLH D+PAY  ++AEN +RGV        YTH++A+S+MAGKNFIGRLGAE+D APVTDV++VVD  TF RPMYAGNA+ATV A+  LKLLT+RPT+F+KA     +A +E+A  PA+  + GL+ FVSESVS   RPDL AARVVVSGGRGMK+G+NF +LE LADKLGGAVGASRAAVDAG+VPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIF  ADYGLVADLF  VPEL  KL
Sbjct:   27 RLASTLVVAEHNNKALSPGTLSAVTAAGKIGGEVHLLVLGSGSAPVAEAASKVAGVAKVLHGDHPAYAHFLAENTSRGVRASAEAHKYTHVMAISSMAGKNFIGRLGAEMDLAPVTDVIKVVDESTFERPMYAGNAIATVTASDPLKLLTVRPTAFDKAPATGGSAAVEAAPLPAE-PETGLSKFVSESVSSSARPDLGAARVVVSGGRGMKNGENFAMLEALADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFTVADYGLVADLFTAVPELTKKL 341          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A5D6Y5S8_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5S8_9STRA)

HSP 1 Score: 382 bits (980), Expect = 3.880e-126
Identity = 214/337 (63.50%), Postives = 255/337 (75.67%), Query Frame = 3
Query:   39 LLARQMRGHCSTYCRRVVSPRHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADA-GLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            +LARQMR         + S R  STLV+AEH+   ++  +LSAVTAA +L GDVT+LVLG  A GVA QAAK+ GVS VLHA +  Y   +AE +   +   Q    YTHIVA S+ A KN+I R+GA+LD AP++DVL V D +TF RPMYAGNA+A V ++ A+KLLT+RPT FEKAA    +A    A+SPA  A   G  +FVSE VS  +RPDLT+ARVV++GGRG+K GDNF++L KLADKLGGAVGASRAAVDAG+VPNELQVGQTGKVVAPELY+AVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF  VPEL  K+
Sbjct:    1 MLARQMR-QIGRRAAALSSARSLSTLVVAEHNLKDVTGGTLSAVTAASQLGGDVTVLVLGSQAAGVAAQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQQANQYTHIVAPSSNASKNYIPRVGAKLDVAPISDVLAVADKDTFFRPMYAGNAIAKVTSSDAVKLLTVRPTGFEKAAAEGGSA----AVSPAPEAPTVGKTAFVSEEVSKSERPDLTSARVVIAGGRGLKSGDNFELLYKLADKLGGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 332          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A2D4CIU3_PYTIN (Electron transfer flavoprotein subunit alpha n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIU3_PYTIN)

HSP 1 Score: 373 bits (957), Expect = 9.590e-123
Identity = 207/337 (61.42%), Postives = 254/337 (75.37%), Query Frame = 3
Query:   39 LLARQMRGHCSTYCRRVVSP-RHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            +LARQ       + RRV +  R  STLVIAEH+   +S S+LSAVTAA ++ GDVTLLVLG  A  VAQ AAK+ GVS VLHA +  Y   +AE++   +   Q    ++HI+A S+ A KN++ RLGA+LD AP++D++ V D +TFLRP YAGNA+A V++  A+K++T+RPT FEKAA     A + +A    + A  G + FVSE VS  +RPDLTAARVV+SGGRG+K G+NF +L KLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+AVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ +DYGLVADLF  VPEL  K+
Sbjct:    1 MLARQ-------FVRRVATVNRSFSTLVIAEHNQKEVSGSTLSAVTAASKIGGDVTLLVLGSQADAVAQSAAKIAGVSNVLHAKDAKYDHLLAEDVTELLVATQKEKSFSHILAPSSNASKNYLPRLGAKLDTAPISDIIAVADKDTFLRPTYAGNAIAQVKSKDAVKIITVRPTGFEKAAAEGGNAAVAAA---PEAAATGKSQFVSEEVSKSERPDLTAARVVISGGRGLKSGENFDMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 327          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: K3WS82_GLOUD (Electron transfer flavoprotein subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS82_GLOUD)

HSP 1 Score: 373 bits (957), Expect = 1.030e-122
Identity = 204/337 (60.53%), Postives = 255/337 (75.67%), Query Frame = 3
Query:   39 LLARQMRGHCSTYCRRVVSPRHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPA-DGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            +LARQ++   +T+     S R  STLV+AEH+   ++  +LSAVTAA ++ GDVT+LVLG  A G+A QAAK+ GVS VLHA +  Y   +AE +   +   Q    +THI+A S+ A KN++ R+GA+LD AP++D+L V D +TFLRP YAGNA+A +++  A+KL+T+RPT FEKAA    +A++    SPA + A  G   FVSE VS  DRPDLT+ARVVVSGGRG+K G+NF++L KLADKL GAVGASRAAVDAG+VPNELQVGQTGKVVAPELYIA GISGAIQHL+GMKDSK IVAINKD+EAPIFQ +DYGLVADLF  VPEL  K+
Sbjct:    1 MLARQIQRRVATFA----SSRSLSTLVVAEHNQKDVTGGTLSAVTAATKIGGDVTVLVLGSQAAGIADQAAKIAGVSSVLHAADAKYDHLIAEEVTELLVAAQKEKNFTHILAPSSNASKNYLPRVGAKLDVAPISDILAVADKDTFLRPTYAGNAIAQIKSKDAVKLITVRPTGFEKAATEGGSASV----SPAPEAATVGKTQFVSEEVSKSDRPDLTSARVVVSGGRGLKSGENFEMLYKLADKLNGAVGASRAAVDAGYVPNELQVGQTGKVVAPELYIAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVSDYGLVADLFTAVPELTEKI 329          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A067CIA0_SAPPC (Electron transfer flavoprotein subunit alpha n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CIA0_SAPPC)

HSP 1 Score: 371 bits (952), Expect = 5.630e-122
Identity = 204/321 (63.55%), Postives = 245/321 (76.32%), Query Frame = 3
Query:   84 RVVSPRHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            ++ + R ASTLV+AEH    L+  +LSA+TAA ++ GD+T+LV G +   VAQ+AA V GV  VLHAD+  Y   +AE +   VA VQA + ++HI+A S+   KNF+ RLGA LD AP+TDVL VVD  TF RPMYAGNA+ATV ++ A+KL+TIRPT FEKAA    +A++ +A + A    A L  FVSE  S  DRPDL +ARVVVSGGRGMK G+NF++L  LADKL GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ +DYG+V DLF VVPEL  K+
Sbjct:   11 KLSAARFASTLVVAEHAGQKLTGGTLSAITAASKIGGDITVLVSGSNTAAVAQEAAAVQGVKAVLHADSAQYDHAIAEEVTNLVAAVQAASSFSHILAPSSNISKNFVPRLGATLDVAPLTDVLAVVDETTFQRPMYAGNAIATVTSSDAVKLMTIRPTGFEKAAATGGSASVSAAPTAAP---ANLTKFVSEETSSSDRPDLASARVVVSGGRGMKSGENFEMLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVSDYGVVDDLFKVVPELTEKI 328          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A6G0XJ74_9STRA (Electron transfer flavoprotein subunit alpha n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJ74_9STRA)

HSP 1 Score: 369 bits (948), Expect = 2.260e-121
Identity = 207/319 (64.89%), Postives = 242/319 (75.86%), Query Frame = 3
Query:   90 VSPRHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            V+ R ASTLV+AEH+  +L+  +LSA+TAA ++ GDVT+LV G ++  VAQ AA V GV  VLHAD   +   +AE I   V TVQ  + +THIVA S+   KNF+ R+GA LD +P TDVL VVD  TF RPMYAGNA+ATV ++ A+KLLT+RPT F+KAA       + +A  PA    AGL+ FVSE  S  DRPDLT+ARVVVSGGRGMK G+NF +L  LADKL GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ ADYGLV DLF+ VPEL  K+
Sbjct:   13 VTSRFASTLVVAEHNGESLTGGTLSAITAASKIGGDVTVLVAGSNSANVAQAAASVQGVKSVLHADAAQFDHSLAEEITSLVVTVQKASNFTHIVAPSSNISKNFLPRVGAALDVSPFTDVLAVVDENTFQRPMYAGNAIATVTSSDAVKLLTVRPTGFDKAATTGGAGAVSAA--PAAPV-AGLSRFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFALLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDGEAPIFQVADYGLVEDLFNAVPELTEKI 328          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A485KD61_9STRA (Electron transfer flavoprotein subunit alpha n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KD61_9STRA)

HSP 1 Score: 369 bits (947), Expect = 3.300e-121
Identity = 207/326 (63.50%), Postives = 242/326 (74.23%), Query Frame = 3
Query:   72 TYCRRVVSPRHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKA-AIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            T+ R   + R ASTLV+AEH    L+  +LSA+TAA ++ GDVT+LV G +   VA++AA V GV  VLHAD   +   +AE +   V T+Q  + ++HIVA S+   KNF+ R+GA LD AP TDVL VVD  TF RPMYAGNA+ATV ++  +KLLT+RPT FEKA A G   +   +  +PA    AGL SFVSE  S  DRPDLT+ARVVVSGGRGMK G+NF +L  LADKL GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD EAPIFQ ADYGLV DLF VVPEL  K+
Sbjct:    8 TFARVSNASRFASTLVVAEHAGQKLTGGTLSAITAASKIGGDVTVLVAGSNTADVAKEAAAVQGVKSVLHADAAQFDHAIAEELTSLVVTIQQASSFSHIVAPSSNISKNFLPRVGAALDVAPFTDVLAVVDENTFQRPMYAGNAIATVTSSDTVKLLTVRPTGFEKANATGGSASVTAAPAAPA----AGLTSFVSEETSSSDRPDLTSARVVVSGGRGMKSGENFGLLNTLADKLKGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDAEAPIFQVADYGLVDDLFKVVPELTEKI 329          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A6H5L5S9_9PHAE (ETF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5S9_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 4.090e-121
Identity = 190/248 (76.61%), Postives = 219/248 (88.31%), Query Frame = 3
Query:   99 RHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQ 842
            R  S+LV+AEHDN  L P +LSAVTAA +L GD+T+LVLGH+++GVA+QAA V GVSKVLHAD+PAYG WVAEN++R VATVQA   ++HI+A+S+MAGKNF+GRLGAELDCAPVTD+L+VVD ETF+RPMYAGNAVATVRAAGALK+LT+RPTSFEKA     TA++ES   P  GADAGLASFVSES SGGDRPDLT ARVVV+GGRG+KDG+NFKILEKLADKLGGAVGASRAAVDAGFV NELQ
Sbjct:   20 RQLSSLVVAEHDNSHLLPGTLSAVTAAAQLNGDITMLVLGHESEGVAKQAAHVAGVSKVLHADDPAYGTWVAENVSRAVATVQANGAFSHILAVSSMAGKNFVGRLGAELDCAPVTDILKVVDEETFVRPMYAGNAVATVRAAGALKILTVRPTSFEKAEATGGTASVESTAPPESGADAGLASFVSESKSGGDRPDLTTARVVVAGGRGLKDGENFKILEKLADKLGGAVGASRAAVDAGFVANELQ 267          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A8K1FT05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT05_PYTOL)

HSP 1 Score: 367 bits (942), Expect = 1.750e-120
Identity = 200/337 (59.35%), Postives = 256/337 (75.96%), Query Frame = 3
Query:   39 LLARQMRGHCSTYCRRVVSP-RHASTLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            +LARQ+        RR+ S  R  STLVIAEH+   ++  +LS +TAA ++  DVTLLV+G  A+GVAQ AAK+ GVS VLHA +  +   +AE++   +   Q    ++HI+A S+ A KN++ RLGA+LD AP++D++ V D +TF+RP YAGNA+A V+++ A+KL+T+RPT FEKAA+   +A++ +A    + A AG   FVSE VS  +RPDL +ARVV+SGGRG+K G+NF++L KLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELY+A GISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF  VPEL  K+
Sbjct:    1 MLARQL-------VRRISSANRSFSTLVIAEHNQKEVTGGTLSTITAASKIGNDVTLLVIGSQAEGVAQAAAKIAGVSNVLHAKDAKFDHLIAEDVTELLLATQKEKNFSHILAPSSNASKNYLPRLGAKLDSAPISDIIAVADKDTFVRPTYAGNAIAQVKSSDAVKLITVRPTGFEKAAVEGGSASVSAA---PEAAAAGKTQFVSEEVSKSERPDLGSARVVISGGRGLKSGENFEMLYKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYVAAGISGAIQHLAGMKDSKTIVAINKDEEAPIFQVADYGLVADLFTAVPELTEKI 327          
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Match: A0A192IMB5_9HYPH (Electron transfer flavoprotein subunit beta n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IMB5_9HYPH)

HSP 1 Score: 360 bits (923), Expect = 6.880e-118
Identity = 196/313 (62.62%), Postives = 245/313 (78.27%), Query Frame = 3
Query:  108 STLVIAEHDNVALSPSSLSAVTAAKELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARGVATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFLRPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGADAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLGGAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKDSKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL 1046
            + LVIAEHDN  L+P++L+ VTAAK +  DVT+LV+GH+A GVA+ AAKV GV KVLHAD+      +AEN  R    V     Y HIVA ST +GKN + R+ A LD   ++D++EV   +TF+RP+YAGNA+ATV+++  +K++T+R T+F KA     +A++E  I+ AD  D GL+SFV E +S  DRPDL  A++VVSGGRGM++G+NF++L K+ADKLG AVGASRAAVDAGFVPN++QVGQTGKVVAPELYIAVGISGAIQHL+GMKDSK IVAINKD+EAPIFQ ADYGLVADLF  VPELESKL
Sbjct:    2 AVLVIAEHDNNELNPATLATVTAAKAMDSDVTVLVMGHNAGGVAEAAAKVAGVGKVLHADDAGLEHSLAEN--RAALIVSLAGDYGHIVAPSTTSGKNILPRVAALLDVQQISDIVEVESADTFVRPIYAGNAMATVQSSDGIKVITVRTTTFAKAEAEGGSASVEQ-IAAAD--DPGLSSFVGERLSESDRPDLATAKIVVSGGRGMQNGENFEMLYKVADKLGAAVGASRAAVDAGFVPNDMQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADLFQAVPELESKL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1022.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFY6_9STRA1.370e-13971.20Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A5D6Y5S8_9STRA3.880e-12663.50Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A2D4CIU3_PYTIN9.590e-12361.42Electron transfer flavoprotein subunit alpha n=1 T... [more]
K3WS82_GLOUD1.030e-12260.53Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A067CIA0_SAPPC5.630e-12263.55Electron transfer flavoprotein subunit alpha n=4 T... [more]
A0A6G0XJ74_9STRA2.260e-12164.89Electron transfer flavoprotein subunit alpha n=2 T... [more]
A0A485KD61_9STRA3.300e-12163.50Electron transfer flavoprotein subunit alpha n=1 T... [more]
A0A6H5L5S9_9PHAE4.090e-12176.61ETF domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A8K1FT05_PYTOL1.750e-12059.35Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A192IMB5_9HYPH6.880e-11862.62Electron transfer flavoprotein subunit beta n=2 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1022contigL-digitata_M_contig1022:1321..4232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog65071.PYU1_T007826
PFAMsETF,ETF_alpha
Model size1671
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.75e-127
EggNOG OGsCOG2025@1|root,KOG3954@2759|Eukaryota,1MC0T@121069|Pythiales
DescriptionElectron transfer flavoprotein subunit alpha, mitochondrial. Source PGD
Cds size1017
COG categoryC
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1022.1.2prot_L-digitata_M_contig1022.1.2Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig1022 1353..3610 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406626.9332917-UTR-L-digitata_M_contig1022:1320..13521682406626.9332917-UTR-L-digitata_M_contig1022:1320..1352Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig1022 1321..1352 +
1682406626.9844553-UTR-L-digitata_M_contig1022:3610..42321682406626.9844553-UTR-L-digitata_M_contig1022:3610..4232Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig1022 3611..4232 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406626.9448614-CDS-L-digitata_M_contig1022:1352..15651682406626.9448614-CDS-L-digitata_M_contig1022:1352..1565Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1022 1353..1565 +
1682406626.9551156-CDS-L-digitata_M_contig1022:1929..20311682406626.9551156-CDS-L-digitata_M_contig1022:1929..2031Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1022 1930..2031 +
1682406626.964897-CDS-L-digitata_M_contig1022:2435..29301682406626.964897-CDS-L-digitata_M_contig1022:2435..2930Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1022 2436..2930 +
1682406626.9748483-CDS-L-digitata_M_contig1022:3403..36101682406626.9748483-CDS-L-digitata_M_contig1022:3403..3610Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1022 3404..3610 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig1022.1.2

>prot_L-digitata_M_contig1022.1.2 ID=prot_L-digitata_M_contig1022.1.2|Name=mRNA_L-digitata_M_contig1022.1.2|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=339bp
MSLLARQMRGHCSTYCRRVVSPRHASTLVIAEHDNVALSPSSLSAVTAAK
ELQGDVTLLVLGHDAQGVAQQAAKVTGVSKVLHADNPAYGKWVAENIARG
VATVQATTPYTHIVALSTMAGKNFIGRLGAELDCAPVTDVLEVVDVETFL
RPMYAGNAVATVRAAGALKLLTIRPTSFEKAAIGSDTATIESAISPADGA
DAGLASFVSESVSGGDRPDLTAARVVVSGGRGMKDGDNFKILEKLADKLG
GAVGASRAAVDAGFVPNELQVGQTGKVVAPELYIAVGISGAIQHLSGMKD
SKCIVAINKDKEAPIFQAADYGLVADLFDVVPELESKL*
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mRNA from alignment at L-digitata_M_contig1022:1321..4232+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig1022.1.2 ID=mRNA_L-digitata_M_contig1022.1.2|Name=mRNA_L-digitata_M_contig1022.1.2|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=2912bp|location=Sequence derived from alignment at L-digitata_M_contig1022:1321..4232+ (Laminaria digitata LdigPH10_18mv male)
CGCCCAGGTACTTTCCTGGGTCTATCCGCGATATGTCACTACTCGCGAGG CAAATGCGTGGCCATTGTTCGACGTATTGCCGTCGAGTTGTGTCCCCGAG GCACGCATCAACCCTAGTCATCGCTGAACACGACAATGTCGCTCTTAGCC CGAGCTCTCTAAGCGCGGTAACTGCGGCAAAGGAGCTCCAAGGCGATGTT ACTCTACTTGTGCTGGGCCACGATGCTCAAGGTGTGGCCCAACAGGTGCG AATATTGCACTTTTGTTCTTGAGACGAGTGTTCTCTTTGGAATAAGCGTT ACTGACAGTAAAATACTGTAAGTTCAACTCAACTTCTACGGCAACTTGTT CTTACACTCGTACGAGTACGAGTACCGACCGGTACGTAGTCTAAAATGGT AAAAGCACGTACTGGTACCTGGTCCTGGTTCGTGTTGCATATTGAAGTTA CGTACGCACTGCTGTGCTGTACCGCTGTGCCCCCTCCTGAGGCCAGCATG CAGTACGTCGACTACTGCTGTATCATAAGAGTAGTTACAGGATTAAATTG CCCTGTGTGTCCCACGTGCCGTGACTCTGTTACAATGCAATTCTCGTCAC GGCTCGTAGGCAGCGAAGGTTACGGGTGTTTCCAAGGTGCTCCACGCTGA TAACCCGGCCTATGGGAAATGGGTTGCCGAGAATATTGCCAGAGGTGTGG CTACTGTTCAGGTGCGGAATGTGAAGACCCAGTACACCGATAGACGGCGG TTGCACGGCATCGAGTAGACGGTACCCATAGAAGGTAGAGACCGGAGCAA CCTCACGTAAAATATTATTGTATCGTACATGCCGACAGCTGACTGCCGAT CTGCCGATTGACCGCAGGTGGATTTTGCTTAAGCGTGTTTTCGCCGGTAC TCGCAAAGCTCAAAAAACGACCCTTGCATGCCGTTCGCTGACACAAGAAG CACATTCCGGTAATATGTAGAGTCGCAGTTAAAAACGTTTGGCTCAAAGC CCATACTTCAAGAGCATGCATTTTGTCAAATGTTCAGTATTCTCCTGTGG CACTCCCAAATTTGGCGAACCGCATCCCTTTGTTCTGCGTCTCGTCTCGG TATGTAATTGCTCAGGCCACGACGCCGTACACCCACATTGTGGCCCTTTC CACCATGGCCGGAAAAAACTTCATTGGTCGGTTGGGGGCAGAGCTCGACT GCGCCCCTGTGACAGATGTCCTTGAAGTCGTCGACGTGGAGACATTTTTA CGGCCGATGTACGCCGGAAACGCAGTTGCGACCGTGCGCGCCGCCGGTGC TTTGAAACTGCTGACGATCCGACCCACTTCGTTTGAGAAAGCAGCGATTG GGAGCGACACGGCTACAATAGAGTCAGCAATTTCCCCGGCAGACGGAGCC GACGCTGGCCTCGCGTCTTTTGTATCCGAGTCTGTTAGCGGAGGGGATAG GCCGGACCTAACGGCAGCGAGGGTGGTAGTGTCTGGAGGCCGAGGAATGA AAGATGGCGATAACTTCAAGATTCTGGAGAAGCTGGCAGATAAACTGGGT GGGGCAGTAGGCGCATCGAGGGCTGCCGTTGATGCAGGCTTTGTGCCAAA CGAACTGCAGGTGAGTCTTTCCGAAGTGTACACTACCAGGTATGATATGT TAGTAAGCCCCCCAAATTTTCACTTTTCTACCGCTTACGTTGTCCGTCGC CTGGCTGCCGTCACTTATTTCCTCGTCGACACTGTTGTAGGTCGTTACTG CAGCCTGCCAACTCGAATTTATACCGCAGTGTGAATACGGCAAAGTCTGA GGGATAGGGCTACTAACAGGTGGAAGCGTATGTAGCCGTTTGGACGCGTT TATGATATGTACATGAACGCATCAACCGACGTTAGACTTAGAAATTTAGA GTTGTGGCATGAAGCCGGCGCCATTTCTGGCAAATGGCCGGCCCGCCTGT CTTTAGCACGCCTGCATGAGGGGGTACCAAAGAGGATCTATATATGCAAG ATGCACGTTGGAGTAGGCCGTTGGTCTCCAGAACTAAATGTTTTCTCTTT TGTAAAACCCTCGGATCGACCCACTTATTGCAGGTGGGCCAAACAGGCAA GGTGGTGGCGCCCGAGTTATACATCGCGGTCGGTATTTCGGGGGCAATTC AGCACCTTTCGGGCATGAAAGACAGCAAGTGCATCGTCGCCATCAACAAG GACAAGGAGGCCCCGATATTTCAGGCGGCTGACTACGGTTTGGTCGCTGA TCTATTCGACGTCGTACCGGAGCTCGAGTCAAAATTGTAATACACTCCGT ACATATTGCATTCGACCAATCTGCGATCGTGCCGATTATCGCCTTTTTTC TCGGTAATGCCAAGACTTCCAAGACGTACTCGTAAATAGAAAATGTGCTG AATGCTGCGCAACTGGTGTAGTGGGTGAAATAGAAAGTGGGAGGAAATCG AGGTGGATGCTGCACTACCGGCGTCTGCCGTGTTTGCAAGTGCGTCTTCC ACCCAAATGCAACACTGCAGCTCCGGGTCCGTAAGCAAGCGCAGCACTTT ATGGTGCGTCTTCCACCCAGATGCAACACTGCAGCTCCGGGTCCGTTAGC AAGCGCATCACTTTATGTTTATTGCCTTTGTAAGAGCAAAATGACGGGTG AATTCAAACGCTAGCGGTCGAAGGATGCATAGCGGGGCCATCGGGAATAA TAGGAAGGGTTGGGCTACCCAGAAATGATGCTACGGTTGTCGGTTTTGGC TTCAGCTTCTCGCCAGTGAGCGATCACAACAGGAGTCTCCACTTTTCGTT TTGTGCCGTTGATTGATTTTGTGACATCAAGCATGGGGAAGCGGGCGATG CTGATTGTTAGCGCTGAAAGGTGCAAAGCGGGAAGGTCGGGGATGAAATG GACAAGTGGGGG
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Coding sequence (CDS) from alignment at L-digitata_M_contig1022:1321..4232+

>mRNA_L-digitata_M_contig1022.1.2 ID=mRNA_L-digitata_M_contig1022.1.2|Name=mRNA_L-digitata_M_contig1022.1.2|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1017bp|location=Sequence derived from alignment at L-digitata_M_contig1022:1321..4232+ (Laminaria digitata LdigPH10_18mv male)
ATGTCACTACTCGCGAGGCAAATGCGTGGCCATTGTTCGACGTATTGCCG
TCGAGTTGTGTCCCCGAGGCACGCATCAACCCTAGTCATCGCTGAACACG
ACAATGTCGCTCTTAGCCCGAGCTCTCTAAGCGCGGTAACTGCGGCAAAG
GAGCTCCAAGGCGATGTTACTCTACTTGTGCTGGGCCACGATGCTCAAGG
TGTGGCCCAACAGGCAGCGAAGGTTACGGGTGTTTCCAAGGTGCTCCACG
CTGATAACCCGGCCTATGGGAAATGGGTTGCCGAGAATATTGCCAGAGGT
GTGGCTACTGTTCAGGCCACGACGCCGTACACCCACATTGTGGCCCTTTC
CACCATGGCCGGAAAAAACTTCATTGGTCGGTTGGGGGCAGAGCTCGACT
GCGCCCCTGTGACAGATGTCCTTGAAGTCGTCGACGTGGAGACATTTTTA
CGGCCGATGTACGCCGGAAACGCAGTTGCGACCGTGCGCGCCGCCGGTGC
TTTGAAACTGCTGACGATCCGACCCACTTCGTTTGAGAAAGCAGCGATTG
GGAGCGACACGGCTACAATAGAGTCAGCAATTTCCCCGGCAGACGGAGCC
GACGCTGGCCTCGCGTCTTTTGTATCCGAGTCTGTTAGCGGAGGGGATAG
GCCGGACCTAACGGCAGCGAGGGTGGTAGTGTCTGGAGGCCGAGGAATGA
AAGATGGCGATAACTTCAAGATTCTGGAGAAGCTGGCAGATAAACTGGGT
GGGGCAGTAGGCGCATCGAGGGCTGCCGTTGATGCAGGCTTTGTGCCAAA
CGAACTGCAGGTGGGCCAAACAGGCAAGGTGGTGGCGCCCGAGTTATACA
TCGCGGTCGGTATTTCGGGGGCAATTCAGCACCTTTCGGGCATGAAAGAC
AGCAAGTGCATCGTCGCCATCAACAAGGACAAGGAGGCCCCGATATTTCA
GGCGGCTGACTACGGTTTGGTCGCTGATCTATTCGACGTCGTACCGGAGC
TCGAGTCAAAATTGTAA
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