mRNA_L-digitata_M_contig102197.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A2D7FMV2_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FMV2_9PROT) HSP 1 Score: 483 bits (1242), Expect = 8.850e-164 Identity = 246/264 (93.18%), Postives = 254/264 (96.21%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEALA 792
EIG+DPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALG+RIKHIAAHLLQA A D+TL DGMA+AG+SSVS+EEVAKTWYLKPQLLPD+VDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNV+LLDYVIVEDAG MINPMIVDGQVHGGTVQGIGTALFEEM FD SGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPP AIANAVNDALAPL EV EIPLTPERILEALA
Sbjct: 519 EIGIDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGERIKHIAAHLLQADAGDITLDDGMAFAGSSSVSIEEVAKTWYLKPQLLPDDVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVELLDYVIVEDAGKMINPMIVDGQVHGGTVQGIGTALFEEMAFDNSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPAAIANAVNDALAPLDVEVCEIPLTPERILEALA 782
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A2E7RH16_9PROT (Carbon monoxide dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7RH16_9PROT) HSP 1 Score: 466 bits (1199), Expect = 2.430e-157 Identity = 234/263 (88.97%), Postives = 249/263 (94.68%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEAL 789
EIGVDP KVK+VHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQ ED+TL+DGMA+AG SSVS+EEVAKTWYLKPQ LPD+VDPRGLEVTEGYKTVQDTGTFSYACHAVKV+VD++ GN++LLDYVIVEDAGTMINPMIVDGQV GGTVQGIGTALFEEMPFD SGQPLASTLADYHLPVAGDIPPVRI HMETPSPLSRFGQKGIGESGAIGPP AIANAVNDAL+PLG EVSEIP+TPER+L +
Sbjct: 516 EIGVDPKKVKVVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQCTREDITLEDGMAHAGKSSVSIEEVAKTWYLKPQQLPDDVDPRGLEVTEGYKTVQDTGTFSYACHAVKVAVDIKSGNIELLDYVIVEDAGTMINPMIVDGQVVGGTVQGIGTALFEEMPFDYSGQPLASTLADYHLPVAGDIPPVRITHMETPSPLSRFGQKGIGESGAIGPPAAIANAVNDALSPLGVEVSEIPMTPERVLSVI 778
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: K2J720_9PROT (Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2J720_9PROT) HSP 1 Score: 440 bits (1132), Expect = 2.980e-147 Identity = 223/273 (81.68%), Postives = 243/273 (89.01%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEALAIGAGAKAAE 819
EIGVDPAKVKLVHGDTAYTPYSTGTWGSRC VMAGGA G A AALG+R++ IAAHL+QA+ E+V L DG A AG+S +S+EEVA TWY KPQLLPD+VDPRGLE TEGYKTV+DTGTFSYACHAV VSVDL G++ LLDYVIVEDAGTM+NPMIVDGQV+GGTVQGIGTALFEEMPFD +GQPLASTLADYHLPVA DIPP+RI HMETPSP+SRFGQKGIGESGAIGPP AIANAVNDALAPLGA V+EIPLTPER+L ALA AAE
Sbjct: 516 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCAVMAGGATGTACAALGERMRKIAAHLMQAKPEEVVLADGFARAGSSQISIEEVAATWYRKPQLLPDDVDPRGLEATEGYKTVRDTGTFSYACHAVVVSVDLSLGHIQLLDYVIVEDAGTMLNPMIVDGQVYGGTVQGIGTALFEEMPFDAAGQPLASTLADYHLPVAADIPPIRILHMETPSPISRFGQKGIGESGAIGPPAAIANAVNDALAPLGAAVNEIPLTPERVLRALAEAQPKMAAE 788
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A154WB07_9PROT (Carbon monoxide dehydrogenase n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154WB07_9PROT) HSP 1 Score: 435 bits (1119), Expect = 2.530e-145 Identity = 222/269 (82.53%), Postives = 240/269 (89.22%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEALAIGAGA 807
EIG+DPAKVKLVHGDTAYTPYSTGTWGSRC VMAGGAVG A+A LGDRI+ IAAHLLQAR E+V L DG A G+++VS+EEVA+TWY KPQLLPD+VDPRGLE TEGYKTV+DTGTFSYACHAV VSVDL+ G+V+LLDYVIVEDAGTMINPMIVDGQV GG QGIGTALFEEM FD SGQPLASTLADYHLPVA DIP RI HMETPSP+SRFGQKGIGESGAIGPP AIANAVNDALA LGAEV++IPLTPER+L ALA G A
Sbjct: 516 EIGIDPAKVKLVHGDTAYTPYSTGTWGSRCAVMAGGAVGTAAAVLGDRIRRIAAHLLQARPEEVILTDGFAKVGSAAVSIEEVARTWYQKPQLLPDDVDPRGLEATEGYKTVRDTGTFSYACHAVVVSVDLQLGHVELLDYVIVEDAGTMINPMIVDGQVQGGLAQGIGTALFEEMQFDSSGQPLASTLADYHLPVASDIPRTRILHMETPSPISRFGQKGIGESGAIGPPAAIANAVNDALASLGAEVNQIPLTPERVLRALAQGKAA 784
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: UPI000E5C802D (xanthine dehydrogenase family protein molybdopterin-binding subunit n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5C802D) HSP 1 Score: 428 bits (1101), Expect = 1.470e-142 Identity = 216/264 (81.82%), Postives = 235/264 (89.02%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEALA 792
EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAV AASAALG+RIK IAAHL+QA V L DGMA AG S +S+ EVAKTWY KP LLPD+VDPRGLE TEGYKTV+DTGTFSYA HAV V VDL G++ L+DYVIVEDAGTMINPM+VDGQV+GG VQGIGTALFEE+PFD +GQPLASTLADYHLPVA DIP +RI HMETPSPLSRFGQKGIGESGAIGPP AIANAVNDALAPLG E++E+P+TPER+L ALA
Sbjct: 521 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVAAASAALGERIKRIAAHLMQADTAQVVLADGMARAGGSEISIAEVAKTWYRKPHLLPDDVDPRGLEATEGYKTVKDTGTFSYAAHAVVVEVDLDLGDIRLVDYVIVEDAGTMINPMVVDGQVYGGAVQGIGTALFEEVPFDAAGQPLASTLADYHLPVAADIPAIRILHMETPSPLSRFGQKGIGESGAIGPPAAIANAVNDALAPLGVEIAEVPMTPERVLRALA 784
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A2D7FE48_9HYPH (Carbon monoxide dehydrogenase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FE48_9HYPH) HSP 1 Score: 426 bits (1094), Expect = 1.650e-141 Identity = 210/268 (78.36%), Postives = 235/268 (87.69%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEALAIGAG 804
E+G+ PAK+K+VHGDTAYTPYSTGTWGSRCIVMAGGAVG A+AA+GDRI+ IA HLLQA+ +D+ LQ G A AG + +S+EEVA TWY KP LP ++DPRGLE TEGYKT DTGTFSYACHAVKVSVDL G ++LLDYV+VEDAGTMINPM+VDGQV GGTVQGIGTALFEEMPFD GQPLASTLADYHLPVA DIPP+RI HMETPSPLS++GQKGIGESGAIGPP AIANAVNDAL PLGA V+EIP+TPER+L ALA AG
Sbjct: 519 ELGISPAKIKVVHGDTAYTPYSTGTWGSRCIVMAGGAVGTAAAAIGDRIRAIAGHLLQAKPDDIVLQGGFARAGDAEISLEEVAHTWYRKPHFLPPDMDPRGLEATEGYKTKPDTGTFSYACHAVKVSVDLDLGQIELLDYVVVEDAGTMINPMVVDGQVLGGTVQGIGTALFEEMPFDAGGQPLASTLADYHLPVAADIPPIRIVHMETPSPLSKYGQKGIGESGAIGPPAAIANAVNDALRPLGARVNEIPMTPERVLSALATAAG 786
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A2D9I5V8_9PROT (Carbon monoxide dehydrogenase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9I5V8_9PROT) HSP 1 Score: 423 bits (1087), Expect = 1.900e-140 Identity = 211/263 (80.23%), Postives = 235/263 (89.35%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEAL 789
EIG+DP K+KLVHGDTAYTPYSTGTWGSRCIVMAGGAVG A +LG+RI IA HLLQA ++ L++GMA GTS++S+EEVAKTWYLKPQLLPD+VDPRGLEV EGYKTV+DTGTFSYACHAVKV VDL G+V LLDYVIVEDAGTMINPM+VDGQV+GG QGIGTALFEEM FD SGQPLASTLADYHLP+A D+P +RI HMETPSPLSRFGQKGIGESGAIGPP AIANAVNDAL+ LGAEVSE+P+TPER+L A+
Sbjct: 516 EIGIDPKKIKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGTACVSLGERISKIAGHLLQADPAEIVLENGMARVGTSAISIEEVAKTWYLKPQLLPDDVDPRGLEVVEGYKTVKDTGTFSYACHAVKVEVDLDLGHVRLLDYVIVEDAGTMINPMVVDGQVYGGAAQGIGTALFEEMCFDASGQPLASTLADYHLPLASDLPAIRIEHMETPSPLSRFGQKGIGESGAIGPPAAIANAVNDALSFLGAEVSEVPITPERVLAAI 778
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A1Y6C6T6_9HYPH (Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6C6T6_9HYPH) HSP 1 Score: 422 bits (1085), Expect = 3.400e-140 Identity = 215/264 (81.44%), Postives = 232/264 (87.88%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEALA 792
E+GVDPAKVKLVHGDTA TPYSTGTWGSRC VMAGGAV AASAAL R++ IA HLLQAR ++V L DG+A AG + VS+EE+A+TWYLKPQLLP + DPRGLE TEGYKT +DTGTFSYACHAV V VDL G V LLDY IVEDAGTMINPM+VDGQV GGTVQGIGTALFEEMPFD +GQPLASTLADYHLPVA DIP +RI HMETPSPLSRFGQKGIGESGAIGPP AIANAVNDALA LGAEV+EIPLTPER+L ALA
Sbjct: 518 ELGVDPAKVKLVHGDTALTPYSTGTWGSRCAVMAGGAVAAASAALAGRVRAIAGHLLQARPDEVVLADGVARAGGAEVSIEEIARTWYLKPQLLPPDADPRGLEATEGYKTARDTGTFSYACHAVTVEVDLDLGQVRLLDYAIVEDAGTMINPMVVDGQVLGGTVQGIGTALFEEMPFDAAGQPLASTLADYHLPVASDIPAIRILHMETPSPLSRFGQKGIGESGAIGPPAAIANAVNDALATLGAEVAEIPLTPERVLRALA 781
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A3S2VLN5_9PROT (Xanthine dehydrogenase family protein molybdopterin-binding subunit n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2VLN5_9PROT) HSP 1 Score: 418 bits (1075), Expect = 1.080e-138 Identity = 211/262 (80.53%), Postives = 232/262 (88.55%), Query Frame = 1
Query: 4 IGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEAL 789
+G+ K+K+VHGDTAYTPYSTGTWGSRCIVMAGGAV A ALG RI++IA HLLQ+ +DV L+DG+A AGT+SVS+EEVAKTWYLKPQLLPD VDPRGLE TEGYKTVQDTGTFSYACHAVKVSVDL G+V LLDYVI EDAGTMINPMIVDGQV GG VQGIGTALFEEMPF +GQP+ASTLADYHLPVA DIP +RI HMETPSPLS FGQKGIGESGAIGPP AIANAVNDAL+ LGAEV+++P+TPERIL AL
Sbjct: 518 LGITIEKIKVVHGDTAYTPYSTGTWGSRCIVMAGGAVATACDALGQRIRNIAGHLLQSENDDVALEDGVARAGTASVSIEEVAKTWYLKPQLLPDGVDPRGLEATEGYKTVQDTGTFSYACHAVKVSVDLDLGHVKLLDYVIAEDAGTMINPMIVDGQVLGGAVQGIGTALFEEMPFSETGQPMASTLADYHLPVAADIPDIRIIHMETPSPLSYFGQKGIGESGAIGPPAAIANAVNDALSSLGAEVAQVPMTPERILAAL 779
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Match: A0A6L8W7V1_9PROT (Molybdopterin-dependent oxidoreductase n=3 Tax=Sneathiella TaxID=510690 RepID=A0A6L8W7V1_9PROT) HSP 1 Score: 410 bits (1055), Expect = 1.190e-135 Identity = 202/264 (76.52%), Postives = 234/264 (88.64%), Query Frame = 1
Query: 1 EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKHIAAHLLQARAEDVTLQDGMAYAGTSSVSVEEVAKTWYLKPQLLPDNVDPRGLEVTEGYKTVQDTGTFSYACHAVKVSVDLRFGNVDLLDYVIVEDAGTMINPMIVDGQVHGGTVQGIGTALFEEMPFDRSGQPLASTLADYHLPVAGDIPPVRIFHMETPSPLSRFGQKGIGESGAIGPPGAIANAVNDALAPLGAEVSEIPLTPERILEALA 792
EIG+DP K+KLVHGDTA TPYSTGTWGSRCIVMAGGAVG+A LG+R++ IA HL+QA D+ L+ GMA AG+S++S+EEVA+TWYLKPQLLPD+VDPRGL+V GYKT +DTGTFSYACHAVKV VD+ G+V LLDYVI+EDAGTMINPM+VDGQV+GG QGIGTALFEEM FD SGQPLASTLADYHLP+A D+P +RI HMETPSPLSRFGQKGIGESGAIGPP AIANAVNDAL+ +GAEV+E+P+TPER+L A+A
Sbjct: 516 EIGIDPEKIKLVHGDTASTPYSTGTWGSRCIVMAGGAVGSACELLGERVRKIAGHLMQADPADIKLEGGMASAGSSTISIEEVARTWYLKPQLLPDDVDPRGLDVVAGYKTTKDTGTFSYACHAVKVEVDMDLGHVRLLDYVIIEDAGTMINPMVVDGQVYGGAAQGIGTALFEEMCFDASGQPLASTLADYHLPLASDLPNIRIEHMETPSPLSRFGQKGIGESGAIGPPAAIANAVNDALSFIGAEVAEVPMTPERVLSAIA 779 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102197.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102197.1.1 >prot_L-digitata_M_contig102197.1.1 ID=prot_L-digitata_M_contig102197.1.1|Name=mRNA_L-digitata_M_contig102197.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=277bp EIGVDPAKVKLVHGDTAYTPYSTGTWGSRCIVMAGGAVGAASAALGDRIKback to top mRNA from alignment at L-digitata_M_contig102197:86..916- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102197.1.1 ID=mRNA_L-digitata_M_contig102197.1.1|Name=mRNA_L-digitata_M_contig102197.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=831bp|location=Sequence derived from alignment at L-digitata_M_contig102197:86..916- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102197:86..916- >mRNA_L-digitata_M_contig102197.1.1 ID=mRNA_L-digitata_M_contig102197.1.1|Name=mRNA_L-digitata_M_contig102197.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=831bp|location=Sequence derived from alignment at L-digitata_M_contig102197:86..916- (Laminaria digitata LdigPH10_18mv male)back to top |