mRNA_L-digitata_M_contig102069.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A7C1JFK0_9CHLR (Extracellular solute-binding protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C1JFK0_9CHLR) HSP 1 Score: 221 bits (563), Expect = 1.770e-66 Identity = 104/210 (49.52%), Postives = 144/210 (68.57%), Query Frame = 1
Query: 55 QEVTLRVWDSFTEQSEGMDAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYAS-GALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDM 681
++VTL WD F E++ +D MVAAF AHP I++ R+ Q ++R +++TAL++GTGPD++YYDTGPG+ G LA GLLLPLD+ YA G + ++ W +ER F G TYGIG+E+EF+GV+YN+ ++++LGL P T++E+LA + LK G P+AF D WPA H FS F +D+L I GEA WNDP V AIQ F+DM
Sbjct: 66 EKVTLLYWDGFGEEAAAVDDMVAAFNEAHPTIQVKRESQ--PNMREILKTALSAGTGPDIMYYDTGPGFAGVLAYAGLLLPLDEAYAQYGWNERIFHWAKERTVFGGKTYGIGHELEFIGVFYNKRIYSELGLAEPKTHDEYLAQCEKLKGAGYIPIAFSDQDKWPAGHMFSVFAGNIAGKDKLAKAISGEAPWNDPDFVQAIQTFFVDM 273
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A6L7U5U8_9CHLR (Extracellular solute-binding protein n=3 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6L7U5U8_9CHLR) HSP 1 Score: 213 bits (543), Expect = 8.330e-64 Identity = 97/209 (46.41%), Postives = 141/209 (67.46%), Query Frame = 1
Query: 58 EVTLRVWDSFTEQSEGMDAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYASGALDA-VYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDM 681
+V++ WD F + S+ MDA+VA F A+ I++ R+ + ++R +++TAL SGTGPD++YYD GPG G LA GLL+PLDD+Y D +YPWT +R TF+G YG+ NE+EF+G YYN+ +FA+ P T++E +A+ A+++ G+ P+AF + P WPAFH FS N RV ++ L MI GE SW+ P VDAI+ F+DM
Sbjct: 36 KVSILFWDQFMDVSDRMDAIVADFNASQDRIEVVREPYTVTAMRDIVRTALTSGTGPDIIYYDLGPGISGVLADAGLLMPLDDIYVERGWDQRIYPWTLDRSTFNGHVYGVANELEFIGFYYNQRLFAEHDWRVPETWDELIALCPAIREAGLVPIAFTNGPSWPAFHMFSIMMNNRVGRERLARMISGEESWDHPDTVDAIRKFFVDM 244
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A845CUQ5_9CHLR (Extracellular solute-binding protein n=4 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A845CUQ5_9CHLR) HSP 1 Score: 211 bits (538), Expect = 5.930e-63 Identity = 101/204 (49.51%), Postives = 139/204 (68.14%), Query Frame = 1
Query: 73 VWDSFTEQSEGMDAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYASGALDA-VYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDM 681
VWD F E S G++ +V F AHP + R+ Q ++R +++T+L++G GPDV+YYDTGPG+ G LAR GLLLPLDD Y A + + P RER +FDGVTYGIGNE+E VG +YN +F + GL AP T+++FLAV +ALK + P+A+G+ WPA HTFS F+ +D L + I GE +WN+P V++IQ F+DM
Sbjct: 53 VWDQFGEDSVGVNEIVVKFNEAHPEYHVTREAQT--NMRDILKTSLDAGAGPDVMYYDTGPGFAGVLARAGLLLPLDDAYEQYAWNEHILPIARERASFDGVTYGIGNELEIVGTFYNERIFDEQGLAAPDTHDDFLAVCEALKAQDIIPMAWGNQNKWPAGHTFSVFSGNIAGKDNLAAAISGELAWNEPDFVESIQIPFVDM 254
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A6L7U4Q7_9CHLR (Extracellular solute-binding protein n=3 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6L7U4Q7_9CHLR) HSP 1 Score: 205 bits (521), Expect = 1.410e-60 Identity = 93/209 (44.50%), Postives = 136/209 (65.07%), Query Frame = 1
Query: 55 QEVTLRVWDSFTEQSEGMDAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYASGALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDM 681
++V + WD F + S+ MDA+VA F + +++ R+ ++R V++TAL+SGTGPD+ YYD GPG+ G LA+ GLL+PLD+ Y D +YPWT R TFDG YGI NE+EF+GV+YN +F + G P ++EE +A+ +++ G+ P+AF + WP++H FS N +V +D L MI G SW+ P VDAIQ F+DM
Sbjct: 31 EKVEILFWDQFPDVSDQMDALVARFNDSQDRVEVVRESYTTAAMRDVIRTALSSGTGPDLFYYDLGPGFAGVLAQAGLLMPLDEAYTEQGWDHIYPWTLARSTFDGHVYGIANELEFIGVFYNMRLFEEHGWSIPNSWEELVAMCAPIQEAGLIPLAFTNGSSWPSYHMFSIVMNNKVGRDRLTRMISGIDSWDHPDTVDAIQKFFVDM 239
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A7C5MI13_9CHLR (Extracellular solute-binding protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5MI13_9CHLR) HSP 1 Score: 203 bits (516), Expect = 1.870e-59 Identity = 95/210 (45.24%), Postives = 135/210 (64.29%), Query Frame = 1
Query: 55 QEVTLRVWDSFTEQSEGMDAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYAS-GALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDM 681
++ + WD F E++ +D MV F AHPNI + R+ Q ++R +++TAL++GTGPD++YYDTGPG+ G LA LLLP+DD YA G D + WT+ R TF G YGIGNE+EF+G +YN+ +F D G PT+++E LA+ + K + P+AF D WPA+H FS F++ +D+L I G+ WND V AIQ F+DM
Sbjct: 68 EKANILFWDQFGEEATALDDMVGVFNNAHPNIVVKRESQ--PNMRDILKTALSAGTGPDIMYYDTGPGFAGVLATADLLLPMDDAYAQYGWNDRFFGWTKSRCTFGGKVYGIGNELEFLGAFYNKKIFQDQGWSEPTSHDEMLALCEKAKAAKLVPIAFADQDKWPAYHEFSIFSSNIAGRDKLAQAISGKVPWNDDDFVSAIQMFFVDM 275
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A2N5K7J2_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2N5K7J2_9CHLR) HSP 1 Score: 194 bits (493), Expect = 9.390e-57 Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = 1
Query: 73 VWDSFTEQSEGMDAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYA-SGALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDM 681
VWD+ + S MD +++ A+P I + R+VQ E +R V++TAL++G GPD+ YDTGPG+ G LA+ GLLLPLDD+YA +G + ++P ++R TF G YGIGN++E VGV+YN+ +F + GL P T+EE L A+ LK GV P+AF + WPA HTFS F +D+ I G W DP V AIQ F++M
Sbjct: 3 VWDTEQDSSAQMDQLISRCTEANPGITVRREVQTTEQMRNVLRTALDAGEGPDIFAYDTGPGFAGVLAQAGLLLPLDDVYAQNGWNERLFPIAKQRTTFGGKAYGIGNQLEVVGVFYNKRIFQEQGLSEPKTHEELLQAAEKLKAAGVIPIAFANQNKWPAGHTFSVFAGNIAGRDKQAQAISGVIPWTDPEFVRAIQIPFVEM 206
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A565EB71_9BACT (Uncharacterized protein n=1 Tax=Candidatus Aerophobetes bacterium Ae_b3a TaxID=2012485 RepID=A0A565EB71_9BACT) HSP 1 Score: 177 bits (450), Expect = 5.250e-50 Identity = 87/215 (40.47%), Postives = 129/215 (60.00%), Query Frame = 1
Query: 55 QEVTLRVWDSFTE--QSEGMDAMVAAFEAAHPNIKIDRD-VQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYAS-GALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDMGG 687
Q++++ +WD FTE + + A+FE HP ++I R V E + +++ AL+SGTGPD++ T GY LA+ GLLLPLD Y G + ++PW++ T G YGI +E+EF+GVYYN+D+F +GL P TY+EFL V + LK G P+AF + WPA+H FS F N + ++ ++ G W+ P V AI+ F+DM G
Sbjct: 32 QKISVTIWDGFTEGASDRACEEIYASFEKLHPQVQILRQAVGTSEQMHPLIKPALSSGTGPDIINDLTAGGYWRHLAKAGLLLPLDTFYEEYGWNERIFPWSKPLTTLGGHVYGIADELEFIGVYYNQDIFKQMGLSVPNTYQEFLGVCEKLKSGGYIPIAFANQAKWPAYHQFSIFVNNLIGAEKTGEILFGNGRWDTPEVEKAIKLFFVDMYG 246
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A7V9SB08_9CHLR (Extracellular solute-binding protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9SB08_9CHLR) HSP 1 Score: 175 bits (444), Expect = 4.130e-49 Identity = 90/213 (42.25%), Postives = 126/213 (59.15%), Query Frame = 1
Query: 55 QEVTLRVWDSFTEQSEGM--DAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYAS-GALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMS-MIEGEASWNDPRVVDAIQAAFIDM 681
+ V LRVWD FT+ E + DA+ AAF A+PNI I R+ + +R + TA++SGTGPDV++YD GPGY G L LLLPL D A G + V P +E T DGV YG+ + + +G+Y N + A GL PTT +E +A A + G FP+AF + PGW FH +S + + D L + ++ E SWN P + AIQ+ F+D+
Sbjct: 35 EAVELRVWDQFTDPEESVVADAIYAAFTEANPNITITREAFETDQMRDTVNTAISSGTGPDVIFYDAGPGYAGILVEAELLLPLTDYAAEYGWTEEVSPSAQEGTTIDGVFYGMPLQTDLIGMYSNETLIAQEGLTTPTTLDELIAFCGAAMEKGYFPIAFANNPGWEGFHQYSMTISQMMGPDALRAKLLNNEGSWNTPEGITAIQSFFVDL 247
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A7V9EJK0_9ACTN (Extracellular solute-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9EJK0_9ACTN) HSP 1 Score: 174 bits (442), Expect = 9.440e-49 Identity = 88/189 (46.56%), Postives = 116/189 (61.38%), Query Frame = 1
Query: 115 MVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYASGALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIEGEASWNDPRVVDAIQAAFIDM 681
++ FEAA+P+I ++R+ A+E R V+QT L S PDV YDTGPG+ G LA+ LL PLDD Y VY W ++RVT+DGV G+ VE +GVYYN+D+F D+G E P T E +A A++ G+ P AFGD WPA H FS + V D L ++ G A WNDP VV+AI+ F D
Sbjct: 62 IIEDFEAANPDITVERESVAVEDQRTVIQTRLRSEEPPDVFGYDTGPGFAGVLAKADLLYPLDDAYKQYGWP-VYDWAKQRVTYDGVLSGVPGSVEEIGVYYNKDVFDDMGFEEPQTLAELEEIASAVQDEGMTPFAFGDQEKWPAGHLFSIAVSNLVGPDGLNQLLYGGAKWNDPEVVEAIEIMFSDF 249
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Match: A0A7W0QPU5_9CHLR (Extracellular solute-binding protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0QPU5_9CHLR) HSP 1 Score: 168 bits (426), Expect = 1.710e-46 Identity = 90/228 (39.47%), Postives = 133/228 (58.33%), Query Frame = 1
Query: 28 ALVVTG-----AVGQE-VTLRVWDSFTE--QSEGMDAMVAAFEAAHPNIKIDRDVQAMESLRAVMQTALNSGTGPDVLYYDTGPGYGGTLARNGLLLPLDDLYAS-GALDAVYPWTRERVTFDGVTYGIGNEVEFVGVYYNRDMFADLGLEAPTTYEEFLAVAQALKQNGVFPVAFGDAPGWPAFHTFSAFTNARVPQDELMSMIE-GEASWNDPRVVDAIQAAFIDM 681
ALVV G A+ Q+ + LRVWD FT+ +E +DA+ AAF +PNI+I R+V + + +R + TA+ SGTGPD++ YD GPGY G LA GLL+PLDD+ G D + P E + DG YG+ + VGV+YN+ + G APTT+ E + + G P+AF + PGW AFH FS T + + + ++++ + SW+ P + AI A F+ +
Sbjct: 8 ALVVGGSGLQPAIAQDTIELRVWDQFTDPVDTEAVDAIYAAFTEQNPNIEIVREVFSTDQMRQTVNTAIASGTGPDIINYDPGPGYAGVLADAGLLVPLDDMADQYGWRDRIAPAALEATSLDGTLYGLPLTTDLVGVFYNQTLMEQEGFTAPTTFAELVTFCGQASEAGYIPMAFTNNPGWEAFHQFSMVTTNMIGPEAMRALLQDNQGSWDSPEITQAIDAYFVQL 235 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102069.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102069.1.1 >prot_L-digitata_M_contig102069.1.1 ID=prot_L-digitata_M_contig102069.1.1|Name=mRNA_L-digitata_M_contig102069.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=229bp MRLAAASIAALVVTGAVGQEVTLRVWDSFTEQSEGMDAMVAAFEAAHPNIback to top mRNA from alignment at L-digitata_M_contig102069:6..692- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102069.1.1 ID=mRNA_L-digitata_M_contig102069.1.1|Name=mRNA_L-digitata_M_contig102069.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=687bp|location=Sequence derived from alignment at L-digitata_M_contig102069:6..692- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102069:6..692- >mRNA_L-digitata_M_contig102069.1.1 ID=mRNA_L-digitata_M_contig102069.1.1|Name=mRNA_L-digitata_M_contig102069.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=687bp|location=Sequence derived from alignment at L-digitata_M_contig102069:6..692- (Laminaria digitata LdigPH10_18mv male)back to top |