mRNA_L-digitata_M_contig102061.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A2E6QMN1_9PROT (Heme lyase NrfEFG subunit NrfE n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QMN1_9PROT) HSP 1 Score: 392 bits (1006), Expect = 2.710e-130 Identity = 186/249 (74.70%), Postives = 217/249 (87.15%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MI E+GH+A+VLAL V+IVQ LP++GAQRG A A+ARPAA+ QF L+++AF+ALT A+V SDFSVLNV +NSH+ KPLLYKISGVWGNHEGS+LLW++ILA FG V+ G NLPP+LR RVI+IQG+IGVGFL + SNPF+R+FP P G LNPLLQDPGLAFHPPFLYLGYVGFS+AF+FA+AALIEG+VDAAWARWVRPWTLAAW+ LTVGIAMGSWWA+YELGWGGWWFWDPVENASF
Sbjct: 1 MIVEIGHYALVLALGVAIVQSALPMIGAQRGDAAWMAVARPAALGQFGLVLIAFIALTHAYVTSDFSVLNVAENSHSAKPLLYKISGVWGNHEGSMLLWIMILATFGMAVSVFGGNLPPALRARVISIQGMIGVGFLTFTLLTSNPFQRLFPAPIDGNDLNPLLQDPGLAFHPPFLYLGYVGFSVAFAFAIAALIEGRVDAAWARWVRPWTLAAWSFLTVGIAMGSWWAYYELGWGGWWFWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A2U1WUW7_9PROT (Cytochrome C biogenesis protein CcmF (Fragment) n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1WUW7_9PROT) HSP 1 Score: 375 bits (962), Expect = 2.830e-129 Identity = 181/249 (72.69%), Postives = 207/249 (83.13%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MI E+GH+A+++A+AV++ Q +PLVGAQRG AL A R AA Q LL+ AF AL A+V SDFSV NV QNSHTDKP+LYK+SG+W NHEGSLLLW+ ILA FG VAT G NLP LR R +A+Q +I VGFLL ++ SNPFER+ PVP G+GLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEG+VDAAWARWVRPWTLAAWT LTVGI +GSWWA+YELGWGGWW+WDPVENASF
Sbjct: 1 MITEIGHYALIMAVAVAMAQAIVPLVGAQRGDRALMAFGRSAAFAQLLLVGTAFGALMHAYVTSDFSVANVAQNSHTDKPMLYKVSGLWANHEGSLLLWITILAGFGAAVATFGRNLPAGLRARTLAVQAMIAVGFLLFILLTSNPFERLDPVPLNGSGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGRVDAAWARWVRPWTLAAWTFLTVGIGLGSWWAYYELGWGGWWYWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A7V7JLR5_9PROT (Heme lyase CcmF/NrfE family subunit (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7JLR5_9PROT) HSP 1 Score: 379 bits (974), Expect = 7.030e-129 Identity = 179/249 (71.89%), Postives = 211/249 (84.74%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MIAE GHFA++LAL V+IVQ T+P++GA RG A +ARPAA QF L+ +AF AL +A+V SDFS+LNV QNSHTDKPLLYK+SGVWGNHEGS+LLWV+ILA +G VA G NLPP+LR R +A+Q +I VGF+L ++ SNPF R+ PVP G GLNPLLQDPGLAFHPPFLYLGYVGFS+A+SFA+AALIEG+VDAAWARWVRPWTL AW +LT+GIAMGSWWA+Y LGWGGWW+WDPVENASF
Sbjct: 1 MIAETGHFALILALLVAIVQATIPMIGAARGDRAWMDLARPAAYAQFALVAMAFAALVVAYVTSDFSLLNVAQNSHTDKPLLYKVSGVWGNHEGSMLLWVLILAIYGMAVAAAGGNLPPALRARALAVQAMIAVGFILFILLTSNPFVRLDPVPFNGNGLNPLLQDPGLAFHPPFLYLGYVGFSMAYSFAIAALIEGRVDAAWARWVRPWTLVAWCSLTLGIAMGSWWAYYTLGWGGWWYWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: UPI00115D1786 (heme lyase CcmF/NrfE family subunit n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115D1786) HSP 1 Score: 386 bits (991), Expect = 4.900e-128 Identity = 184/249 (73.90%), Postives = 212/249 (85.14%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MI E+GH+A+VLAL V+IVQ T+PL+GA R A +ARPAA++QFL + +AF ALT AFV SDFSVLNV QNSHTDKP+LYK+SGVWGNHEGSLL W+ L FG VA G NLPPSLR RV+A+Q +I VGFLL ++F SNPFER+ P P+ G+GLNPLLQDPGLAFHPPFLY GYVGFSIAFSFA+AAL+EGKVDAAWARWVRPWTLAAW LT+GIA+GSWWA+YELGWGGWW+WDPVENASF
Sbjct: 1 MIPEIGHYALVLALFVAIVQATVPLIGAHRNDAAWMEVARPAALVQFLCVAVAFAALTHAFVVSDFSVLNVAQNSHTDKPMLYKVSGVWGNHEGSLLFWITTLGLFGLMVALFGRNLPPSLRARVLAVQAMITVGFLLFVLFTSNPFERLDPAPANGSGLNPLLQDPGLAFHPPFLYFGYVGFSIAFSFAIAALLEGKVDAAWARWVRPWTLAAWVCLTLGIALGSWWAYYELGWGGWWYWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A4R3JEU5_9PROT (Cytochrome c-type biogenesis protein CcmF n=1 Tax=Varunaivibrio sulfuroxidans TaxID=1773489 RepID=A0A4R3JEU5_9PROT) HSP 1 Score: 385 bits (989), Expect = 9.800e-128 Identity = 186/249 (74.70%), Postives = 210/249 (84.34%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MI E GHFA++LAL V++ Q T+PL GAQRG AL A +R AA +QF L+ +AF ALT A SDFSVLNV NSH+DKP+LYKISGVWGNHEGS+LLWV+ILA +G VA G NLPP+LR RV+AIQ LI VGF L ++F SNPF R+FP P+ G GLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFA+AALIEG+VDAAWARWVRPWTLAAWT LTVGI +GSWWA+YELGWGGWWFWDPVENASF
Sbjct: 1 MIVETGHFALILALMVALFQATVPLWGAQRGDGALMAASRSAAALQFALVAIAFAALTYAHATSDFSVLNVVNNSHSDKPMLYKISGVWGNHEGSMLLWVLILALYGIAVAVFGRNLPPALRARVLAIQALIAVGFYLFILFTSNPFVRIFPAPANGQGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAIAALIEGRVDAAWARWVRPWTLAAWTFLTVGIGLGSWWAYYELGWGGWWFWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A2U1VAH7_9PROT (Cytochrome C biogenesis protein CcmF (Fragment) n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1VAH7_9PROT) HSP 1 Score: 368 bits (945), Expect = 1.100e-126 Identity = 178/249 (71.49%), Postives = 206/249 (82.73%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MI ELGH+A+VL L V++VQ TLP+VGA G A +ARPAA Q ++ +A+ ALT A V SDFSVLNV NSH+ KP+LYK+SGVWGNHEGS++LWVV+LAAFG VAT G NLPP+L+ RV+A+QG+I VGFLL ++ SNPF RVFP P G LNPLLQDPGLAFHPPFLY GYVGFS+AFSFAVAALIEG+VD AWARWVRPWTLAAW LT GIA+GSWWA+YELGWGGWW+WDPVENASF
Sbjct: 1 MIPELGHYALVLTLFVALVQSTLPMVGAATGNRAWMNVARPAAFAQVTMIGVAYAALTWAHVVSDFSVLNVVNNSHSLKPMLYKVSGVWGNHEGSMVLWVVMLAAFGAAVATFGRNLPPTLQARVLAVQGIIAVGFLLFILITSNPFTRVFPAPLDGHDLNPLLQDPGLAFHPPFLYAGYVGFSMAFSFAVAALIEGRVDPAWARWVRPWTLAAWICLTAGIALGSWWAYYELGWGGWWYWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A6J4FEY5_9PROT (Heme lyase, CcmF subunit n=1 Tax=Magnetospirillum sp. UT-4 TaxID=2681467 RepID=A0A6J4FEY5_9PROT) HSP 1 Score: 382 bits (980), Expect = 2.090e-126 Identity = 183/249 (73.49%), Postives = 212/249 (85.14%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MIAE+GHFA+VLALAV+ VQ +PLVGA+RG A +A PAA+ Q +L+ +AF ALT A+V SDFS+LNV QNSHTDKP+LYK+SGVWGNHEGSLLLW+ ILA FG V G NLPP+L+ R +A+Q LI VGFL ++F SNPFER+ P P G+GLNPLLQDPGLAFHPPFLYLGYVGFS+AFSFA+AALIEGKVDAAWARWVRPWTLAAW LT+GIA+GSWWA+YELGWGGWW+WDPVENASF
Sbjct: 1 MIAEIGHFALVLALAVACVQAVVPLVGAERGERAWMDLAGPAAVAQLVLVGIAFAALTHAYVTSDFSLLNVAQNSHTDKPMLYKVSGVWGNHEGSLLLWITILALFGAAVTAFGGNLPPTLKARALAVQALITVGFLAFILFTSNPFERLDPPPMNGSGLNPLLQDPGLAFHPPFLYLGYVGFSMAFSFAIAALIEGKVDAAWARWVRPWTLAAWVFLTLGIALGSWWAYYELGWGGWWYWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A2E3P1X9_9PROT (Heme lyase NrfEFG subunit NrfE n=6 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3P1X9_9PROT) HSP 1 Score: 382 bits (980), Expect = 2.210e-126 Identity = 185/249 (74.30%), Postives = 208/249 (83.53%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MIAELGHFA++LAL VS VQ TLPL+GA RG A+ARPAA+MQFLL+ +AF L ++ SDFSVLNV QNSHTDKPL+YKISGVWGNHEGS+LLWV+ILA FG VA G NLPPSLR RV++IQ LI VGF L ++ SNPFER+ P P G LNPLLQDPGLAFHPP LYLGYVGFS+AFSFA+AALIEG+VDAAWARWVRPWTLAAW LT GI +GSWWA+YELGWGGWW+WDPVENASF
Sbjct: 1 MIAELGHFALILALFVSAVQATLPLIGAHRGDAGWMAVARPAALMQFLLVAVAFGCLMNLYITSDFSVLNVAQNSHTDKPLIYKISGVWGNHEGSMLLWVLILALFGSAVAAFGANLPPSLRARVLSIQALIAVGFYLFILLTSNPFERLIPAPINGNDLNPLLQDPGLAFHPPMLYLGYVGFSMAFSFAIAALIEGRVDAAWARWVRPWTLAAWCFLTAGIGLGSWWAYYELGWGGWWYWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: A0A1Y5E630_9PROT (C-type cytochrome biogenesis protein CcmF n=1 Tax=Alphaproteobacteria bacterium 46_93_T64 TaxID=1856292 RepID=A0A1Y5E630_9PROT) HSP 1 Score: 381 bits (978), Expect = 4.300e-126 Identity = 178/249 (71.49%), Postives = 212/249 (85.14%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
MI E+GHF ++LAL V+++QGTLP++GA +G AL A AA++QFL + ++F+ALT+A+VGSDFS++NV QNSH+ KP+LYKISGVWGNHEGSLLLW ILA FGF VA G NLP L+ RV+++QG+IG+GFLL ++F SNPFER+ P P G GLNPLLQDPGLAFHPPFLYLGYVG SI FSFA+AALIEGKVD AWARWVRPWTLAAW LT+GIA+GSWWA+YELGWGGWWFWDPVENASF
Sbjct: 1 MIGEIGHFGLILALVVAVLQGTLPMIGASKGNVALMRFASSAALVQFLAVSISFIALTIAYVGSDFSIVNVAQNSHSLKPMLYKISGVWGNHEGSLLLWAWILALFGFAVAAFGRNLPDGLKARVLSVQGMIGIGFLLFILFTSNPFERIDPAPFDGRGLNPLLQDPGLAFHPPFLYLGYVGLSITFSFAIAALIEGKVDPAWARWVRPWTLAAWGFLTLGIALGSWWAYYELGWGGWWFWDPVENASF 249
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Match: W6KAR3_MAGSQ (Cytochrome c-type biogenesis protein CycK n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6KAR3_MAGSQ) HSP 1 Score: 380 bits (975), Expect = 8.440e-126 Identity = 178/249 (71.49%), Postives = 208/249 (83.53%), Query Frame = 1
Query: 1 MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLILAFVALTMAFVGSDFSVLNVWQNSHTDKPLLYKISGVWGNHEGSLLLWVVILAAFGFGVATMGNNLPPSLRTRVIAIQGLIGVGFLLLLVFLSNPFERVFPVPSQGTGLNPLLQDPGLAFHPPFLYLGYVGFSIAFSFAVAALIEGKVDAAWARWVRPWTLAAWTALTVGIAMGSWWAFYELGWGGWWFWDPVENASF 747
M E+GHFA++LAL V++VQGTLPL+GAQR A+A PAA+ Q LL+ ++F ALT AFV SDFSVLNV +NSH+DKP+LYK+SGVWGNHEGS+LLWV ILA +G VA G NLPP L+ R +AIQ ++ VGFL ++F SNPFER+ P P G GLNPLLQDPGLAFHPPFLYLGYVGFS+AFSFA+AALIEG+VDAAWARWVRPWTL AW LT+GI +GSWWA+YELGWGGWWFWDPVENASF
Sbjct: 1 MFTEIGHFALILALCVAVVQGTLPLIGAQRNNATWMALASPAALAQLLLIAISFAALTHAFVTSDFSVLNVAKNSHSDKPMLYKVSGVWGNHEGSMLLWVFILAIYGGAVAAFGRNLPPGLKARALAIQAMVSVGFLAFILFTSNPFERLVPPPFDGQGLNPLLQDPGLAFHPPFLYLGYVGFSMAFSFAIAALIEGRVDAAWARWVRPWTLVAWITLTIGIGLGSWWAYYELGWGGWWFWDPVENASF 249 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102061.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102061.1.1 >prot_L-digitata_M_contig102061.1.1 ID=prot_L-digitata_M_contig102061.1.1|Name=mRNA_L-digitata_M_contig102061.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=249bp MIAELGHFAIVLALAVSIVQGTLPLVGAQRGIEALSAIARPAAIMQFLLLback to top mRNA from alignment at L-digitata_M_contig102061:2..748- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102061.1.1 ID=mRNA_L-digitata_M_contig102061.1.1|Name=mRNA_L-digitata_M_contig102061.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=747bp|location=Sequence derived from alignment at L-digitata_M_contig102061:2..748- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102061:2..748- >mRNA_L-digitata_M_contig102061.1.1 ID=mRNA_L-digitata_M_contig102061.1.1|Name=mRNA_L-digitata_M_contig102061.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=747bp|location=Sequence derived from alignment at L-digitata_M_contig102061:2..748- (Laminaria digitata LdigPH10_18mv male)back to top |