mRNA_L-digitata_M_contig102055.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A7W1A1P9_9DELT (PilZ domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W1A1P9_9DELT) HSP 1 Score: 57.8 bits (138), Expect = 9.320e-9 Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARNIS GG+LVE+ AP +G+ V + F+ RG D + EV+HH ++ G A S R +G+RF++
Sbjct: 22 IARNISAGGILVEMSYAPPLGTVVTVHFQHARGD-DLMDEIVARAEVKHHHYLNFSG-SGEAASSRAIGLRFLE 93
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A7W1MKT5_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W1MKT5_9DELT) HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8 Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARN+S GG+LVE+ AP +G+ V + F+ +RG D + + EV+HH + G A S R +G+RF++
Sbjct: 60 IARNVSAGGILVEMTYAPPLGTVVTVHFQHIRGEDQL-DEMVVRAEVKHHHYLNFTG-SGEAASTRAIGMRFLE 131
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A538Q9N8_9DELT (PilZ domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538Q9N8_9DELT) HSP 1 Score: 57.0 bits (136), Expect = 2.170e-8 Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVDA----EKIP 237
+ARNIS GG+LVE+ AP +G+ V + F+ R D + + EV+HH + + +A S R +G+RF++ E+IP
Sbjct: 28 VARNISAGGILVEMTYAPPLGTVVTVHFQHARDDDDDLDEMVVRAEVKHHHYLNFTGGNDAASS-RAIGLRFLEFVVRDERIP 109
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A7W0Q5W7_9DELT (PilZ domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0Q5W7_9DELT) HSP 1 Score: 57.4 bits (137), Expect = 2.630e-8 Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARN+S GG+LVE+ AP +G+ V + F+ RG D + + EV+HH + G A S R +G+RF++
Sbjct: 55 IARNVSAGGILVEMTYAPPLGTVVTVHFQHARGEDQL-DEMVVRAEVKHHHYLNFTG-SGEAASTRAIGMRFLE 126
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A7V9L5K8_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V9L5K8_9DELT) HSP 1 Score: 57.0 bits (136), Expect = 3.840e-8 Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARN+S GG+LVE+ AP +G+ V + F+ R D + + EV+HH + A +A S R +G+RF++
Sbjct: 56 VARNVSTGGILVEMSYAPPLGTVVTVHFQHTRADDLL-DEIVVRAEVKHHHYLNFGAIGETATSTRAIGLRFLE 128
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A7Y6UJF6_9DELT (Uncharacterized protein n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7Y6UJF6_9DELT) HSP 1 Score: 56.2 bits (134), Expect = 7.470e-8 Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAP--DSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARNIS GG+LVE+ AP +G+ V + F+ VR P D + EV+HH + + +A S R +G+RF++
Sbjct: 53 IARNISAGGLLVEMSYAPPLGTIVTVHFQYVREGGEVPVMDEIVARAEVKHHHYLNFAGGNDAAAS-RAIGLRFIE 127
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A7W0ZSZ7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0ZSZ7_9DELT) HSP 1 Score: 56.2 bits (134), Expect = 7.470e-8 Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARN+S GG+LVE+ AP +G+ V + F+ RG D + EV+HH + G A S R +G+RF++
Sbjct: 56 IARNVSAGGILVEMNYAPPLGTVVTVHFQNARGDDLF-DEIVARAEVKHHHYLNFTG-SGEAASSRAIGMRFLE 127
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A3M2E1A7_9DELT (PilZ domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M2E1A7_9DELT) HSP 1 Score: 55.8 bits (133), Expect = 2.290e-7 Identity = 35/77 (45.45%), Postives = 41/77 (53.25%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVE---LHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARNIS GGM VELI P IGS V + F PDS E EV+HH A G + RGVG+RFV+
Sbjct: 104 VARNISAGGMFVELIAPPPIGSVVTVRFR-------IPDSDEDVVARAEVKHHYCLNVTAA-GEPTAARGVGLRFVE 172
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: UPI0019BD7733 (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=UPI0019BD7733) HSP 1 Score: 54.3 bits (129), Expect = 4.810e-7 Identity = 27/74 (36.49%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARN+S GG+LVE+ AP +G+ V + F+ R D + EV+HH + A A S R +G+RF++
Sbjct: 65 IARNVSTGGILVEMTYAPPLGTVVTVHFQHARDDEQL-DEIVARAEVKHHHYLNF-AEGNDAASTRAIGLRFIE 136
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Match: A0A7W0Y1G5_9DELT (PilZ domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0Y1G5_9DELT) HSP 1 Score: 53.5 bits (127), Expect = 6.390e-7 Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 1
Query: 1 MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHMAWQYNAPDGSARSMRGVGIRFVD 222
+ARNIS GG+LVE+ AP +G+ V + F+ R D + EV+HH + G A S R +G+RF++
Sbjct: 43 VARNISGGGILVEMPYAPPLGTVVTVHFQYAREGDEF-DEIVARAEVKHHHYLNFTG-SGDAASARAIGMRFIE 114 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig102055.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig102055.1.1 >prot_L-digitata_M_contig102055.1.1 ID=prot_L-digitata_M_contig102055.1.1|Name=mRNA_L-digitata_M_contig102055.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=96bp MARNISEGGMLVELIMAPAIGSRVQITFEGVRGSTSAPDSVELHGEVRHHback to top mRNA from alignment at L-digitata_M_contig102055:3..290+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig102055.1.1 ID=mRNA_L-digitata_M_contig102055.1.1|Name=mRNA_L-digitata_M_contig102055.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=288bp|location=Sequence derived from alignment at L-digitata_M_contig102055:3..290+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig102055:3..290+ >mRNA_L-digitata_M_contig102055.1.1 ID=mRNA_L-digitata_M_contig102055.1.1|Name=mRNA_L-digitata_M_contig102055.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=288bp|location=Sequence derived from alignment at L-digitata_M_contig102055:3..290+ (Laminaria digitata LdigPH10_18mv male)back to top |