mRNA_L-digitata_M_contig101994.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A2E8XRG3_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XRG3_9PROT) HSP 1 Score: 234 bits (596), Expect = 2.040e-74 Identity = 115/149 (77.18%), Postives = 131/149 (87.92%), Query Frame = 3
Query: 429 VSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGTSKN 875
+ V+VTRL HGADL+LP+YETADAAGMDL+AA+ DV + PG +TL+PTGLAIALPP YEAQIRPRSGLALRNGISLVN+PGTIDADYRGE+GVI+INHG+E VTRGMRIAQMV APVT+A+W E LP TERGAGGFGSTGT+ N
Sbjct: 5 IDVAVTRLAHGADLELPSYETADAAGMDLRAAVEADVTVQPGEQTLIPTGLAIALPPGYEAQIRPRSGLALRNGISLVNTPGTIDADYRGEVGVILINHGDEPLVVTRGMRIAQMVFAPVTRAVWTETDSLPETERGAGGFGSTGTAGN 153
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: UPI0018666CA6 (dUTP diphosphatase n=1 Tax=Nisaea sediminum TaxID=2775867 RepID=UPI0018666CA6) HSP 1 Score: 227 bits (579), Expect = 6.080e-72 Identity = 115/147 (78.23%), Postives = 128/147 (87.07%), Query Frame = 3
Query: 426 SVSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGT 866
+V V V RLPHGADL LPAY+TAD+AGMDL AAIAEDV +APG R L+PTGLAIALPP YE Q+RPRSGL+LRNGI+ +N+PGTIDADYRGEIGVI+INHG E FTVTRGMRIAQMVVAPV QA W+EV L TERG+GGFGSTGT
Sbjct: 5 TVDVRVQRLPHGADLPLPAYQTADSAGMDLLAAIAEDVVLAPGERKLIPTGLAIALPPGYEGQVRPRSGLSLRNGITQLNTPGTIDADYRGEIGVILINHGAEPFTVTRGMRIAQMVVAPVIQARWNEVTALDETERGSGGFGSTGT 151
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A2E7PM64_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PM64_9PROT) HSP 1 Score: 227 bits (578), Expect = 9.200e-72 Identity = 111/149 (74.50%), Postives = 128/149 (85.91%), Query Frame = 3
Query: 426 SVSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGTSK 872
+V V+V RLPHGAD++LP+YETADAAGMDL+AA+ D+ IAPG R LVPTGLAIALP YEAQ+RPRSGLALRNGISLVN+PGTIDADYRGE+GV++INHG+E TV RGMRIAQ+V+APVTQA W E L T RGAGGFGSTGT +
Sbjct: 4 TVDVAVIRLPHGADIELPSYETADAAGMDLRAAVTNDLVIAPGERALVPTGLAIALPQGYEAQVRPRSGLALRNGISLVNTPGTIDADYRGEVGVVLINHGDEPLTVNRGMRIAQLVIAPVTQARWQETDSLSETSRGAGGFGSTGTGR 152
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A2E7I3P6_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I3P6_9PROT) HSP 1 Score: 226 bits (576), Expect = 1.850e-71 Identity = 110/148 (74.32%), Postives = 127/148 (85.81%), Query Frame = 3
Query: 429 VSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGTSK 872
V V++TRLPHG DLDLP+YET DAAGMDL+AA+A+DV + PG R L+PTG+AIALP YEAQ+RPRSGLA+RNGISLVN+PGTIDADYRGE+GVI+INHG+E FTV RGMRIAQMV+APVTQA W E L T RG GGFGSTGT +
Sbjct: 5 VDVAITRLPHGTDLDLPSYETDDAAGMDLRAAVADDVVLTPGERALIPTGMAIALPTGYEAQVRPRSGLAMRNGISLVNTPGTIDADYRGELGVILINHGQEPFTVRRGMRIAQMVIAPVTQARWQETDNLSETIRGGGGFGSTGTGE 152
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: UPI0018672ABA (dUTP diphosphatase n=2 Tax=Nisaea TaxID=390876 RepID=UPI0018672ABA) HSP 1 Score: 220 bits (560), Expect = 4.590e-69 Identity = 108/147 (73.47%), Postives = 127/147 (86.39%), Query Frame = 3
Query: 426 SVSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGT 866
++ V V RL HGADL LP Y+T D+AGMDL AAI+EDV +APG RTL+PTGL+IALPP +EAQ+RPRSGLALRNG++ +N+PGTIDADYRGEIGVI+INHG++ FTVTRGMRIAQM+VAPV QA W EV EL T RG+GGFGSTGT
Sbjct: 5 TIDVRVRRLSHGADLPLPEYQTQDSAGMDLMAAISEDVVLAPGERTLIPTGLSIALPPGFEAQVRPRSGLALRNGVTQLNTPGTIDADYRGEIGVILINHGQQPFTVTRGMRIAQMLVAPVIQARWQEVEELDETARGSGGFGSTGT 151
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A848W630_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W630_9PROT) HSP 1 Score: 217 bits (552), Expect = 9.100e-68 Identity = 105/147 (71.43%), Postives = 128/147 (87.07%), Query Frame = 3
Query: 429 VSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGTS 869
V+V+VTRLPHGADL+LPAYE++ AAGMDL AAI + IAPG R LVPTGLAIALP +EAQ+RPRSGLAL+ GI++VN+PGTIDADYRGE+G+I+INHG+ FT+ RGMRIAQM+V PVTQA+W+EV LP ++RG GGFGSTGT+
Sbjct: 8 VNVAVTRLPHGADLELPAYESSLAAGMDLMAAIDSQMVIAPGERALVPTGLAIALPAGFEAQVRPRSGLALKQGITVVNTPGTIDADYRGEVGIILINHGDSPFTIDRGMRIAQMIVTPVTQAVWNEVESLPESDRGTGGFGSTGTA 154
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A2D7Z2C2_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Nisaea sp. TaxID=2024842 RepID=A0A2D7Z2C2_9PROT) HSP 1 Score: 215 bits (548), Expect = 2.720e-67 Identity = 108/147 (73.47%), Postives = 122/147 (82.99%), Query Frame = 3
Query: 429 VSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGTS 869
+ V V RLPHGADL LPAY+TAD+AGMDL AAI + +APGAR L+PTGLAIALPP +EAQIRPRSGLALR+GIS VN+PGTIDADYRGEIG+I+INHG+ +TRGMRIAQMVVAPV QA W EV L T RG GGFGSTGT+
Sbjct: 2 IDVRVNRLPHGADLPLPAYQTADSAGMDLMAAIDAPITLAPGARQLIPTGLAIALPPGHEAQIRPRSGLALRDGISQVNAPGTIDADYRGEIGIILINHGDRPVEITRGMRIAQMVVAPVIQARWQEVDSLDETARGGGGFGSTGTT 148
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A7X2KDN7_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2KDN7_9PROT) HSP 1 Score: 215 bits (548), Expect = 2.910e-67 Identity = 103/148 (69.59%), Postives = 125/148 (84.46%), Query Frame = 3
Query: 426 SVSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGTS 869
+ ++ VTRLPHGADLDLPAY TA +AGMDL AAI+E + PG R ++PTGLAIAL P +EAQ+RPRSGLA +NG++++NSPGTIDADYRGE+GVI+INHG++ FT+ RGMRIAQMV+APVTQA W EV L T RGAGGFGSTGT+
Sbjct: 4 TTNIRVTRLPHGADLDLPAYATAQSAGMDLLAAISEPKTLQPGGRAIIPTGLAIALEPDFEAQVRPRSGLAAKNGVTVLNSPGTIDADYRGEVGVILINHGDQAFTIERGMRIAQMVIAPVTQARWQEVASLDETARGAGGFGSTGTA 151
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A2E6Q713_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q713_9PROT) HSP 1 Score: 214 bits (545), Expect = 8.280e-67 Identity = 104/146 (71.23%), Postives = 125/146 (85.62%), Query Frame = 3
Query: 429 VSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGT 866
++V++TRLPHGADL LP Y TAD+AG+DL AI + + +APG RTLVP+GLAIALP YEAQ+RPRSGLA +NG++++NSPGTIDADYRGEIGVI+INHG + F + RGMRIAQM++APVTQ WDEV ELP T RGAGGFGSTGT
Sbjct: 4 LTVAITRLPHGADLPLPEYATADSAGLDLLPAIDDVLILAPGERTLVPSGLAIALPSGYEAQVRPRSGLAYKNGVTVLNSPGTIDADYRGEIGVILINHGNDAFAIERGMRIAQMIIAPVTQLEWDEVEELPETVRGAGGFGSTGT 149
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Match: A0A1J5SYC5_9ZZZZ (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5SYC5_9ZZZZ) HSP 1 Score: 214 bits (545), Expect = 8.560e-67 Identity = 105/149 (70.47%), Postives = 126/149 (84.56%), Query Frame = 3
Query: 426 SVSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPTGLAIALPPSYEAQIRPRSGLALRNGISLVNSPGTIDADYRGEIGVIVINHGEETFTVTRGMRIAQMVVAPVTQALWDEVPELPATERGAGGFGSTGTSK 872
+V + V RL HGADL LPAYETA AAG+DL AA+A + +APGAR LVPTGLAIALP YEAQ+RPRSGLA R G++++NSPGTIDADYRGE+ VI+INHG ETFTVT GMRIAQMVVAPV +A+W++ ELP ++RGAGGFGSTG ++
Sbjct: 3 AVPIRVQRLAHGADLPLPAYETAHAAGLDLAAALAAPLQLAPGARALVPTGLAIALPEGYEAQVRPRSGLAARQGVTVLNSPGTIDADYRGEVKVILINHGSETFTVTHGMRIAQMVVAPVVRAVWEDCAELPGSDRGAGGFGSTGLTR 151 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101994.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101994.1.1 >prot_L-digitata_M_contig101994.1.1 ID=prot_L-digitata_M_contig101994.1.1|Name=mRNA_L-digitata_M_contig101994.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=154bp MSVSVSVTRLPHGADLDLPAYETADAAGMDLQAAIAEDVDIAPGARTLVPback to top mRNA from alignment at L-digitata_M_contig101994:1..884+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101994.1.1 ID=mRNA_L-digitata_M_contig101994.1.1|Name=mRNA_L-digitata_M_contig101994.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=884bp|location=Sequence derived from alignment at L-digitata_M_contig101994:1..884+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101994:1..884+ >mRNA_L-digitata_M_contig101994.1.1 ID=mRNA_L-digitata_M_contig101994.1.1|Name=mRNA_L-digitata_M_contig101994.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=462bp|location=Sequence derived from alignment at L-digitata_M_contig101994:1..884+ (Laminaria digitata LdigPH10_18mv male)back to top |