mRNA_L-digitata_M_contig101993.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A6N9AFL7_9BACT (SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A6N9AFL7_9BACT) HSP 1 Score: 351 bits (901), Expect = 9.250e-110 Identity = 184/306 (60.13%), Postives = 231/306 (75.49%), Query Frame = 1
Query: 22 GQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSGAFLDPDGNVIP--------YGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
GQ++ L +IGY+D+ +TIT+ G T DF L DLL+LDE VVTGV EATP KKLAFTVS++ +E++ AP ++ V S+QGK+AG +V SG PG+ +SVRLRG+TSITGS+QPLYIVDGV+LGANQVDI ALD+E++E+VKGAAASSLYGSRAQ GVI I T+RG +PLNQTRVTVRNE+G++ + AN SH+L V+GSG FLD G YGPGT+ D +GA+FYDNPY G ++AF+QFFNPGNT TNYV +SQN+ KTNF SFTN+ E G +QGL G R++VR
Sbjct: 74 GQTLELSAVYIGYTDEVRTITIGEGIMTQDFVLAADLLQLDEFVVTGVAEATPRKKLAFTVSQVGSEEITLAPASNPVASIQGKVAGVAVQARSGTPGDAISVRLRGATSITGSNQPLYIVDGVVLGANQVDIDALDIENVEIVKGAAASSLYGSRAQNGVINITTQRGGAIPLNQTRVTVRNEYGVSGVAKSFQANTSHDLRVDGSGNFLDDSGAKNECSTCLSNGYGPGTLQDTNPHGAAFYDNPYQGTLYNAFDQFFNPGNTWTNYVGVSQNSSKTNFLASFTNVVEQGAIQGLSGLQRRNVR 379
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A848VPC0_9BACT (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A848VPC0_9BACT) HSP 1 Score: 348 bits (893), Expect = 1.470e-108 Identity = 190/317 (59.94%), Postives = 228/317 (71.92%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSGAFLDPDG--NVIP------YGPGTIIDQ--EINGASFYDNPYV--GETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
VPA +GQ VTLR+ F+G+S Q + ITL+ GTQT DF L D LRLDEVVVTGV+ ATP KKLAFTV KLD Q++ AP +AV+S+QGK+AG S+ + SG PG+G SVRLRG+TS+TGSS P+YIVDGVIL DI ALD+ES+EVVKGAAASSLYGSRAQ GVIQI T+RG N+ NQTRVT RNEFG N L D AN +H+L VN +G F++ DG N YGPGT+ D N SFYD Y G + F++FF G+T TNY+++SQN+ KTNFH SFTN E GVL G+DGFNRKS R
Sbjct: 64 VPAAQARGQQVTLRSRFVGFSPQMRVITLNPGTQTQDFVLVLDRLRLDEVVVTGVSSATPAKKLAFTVDKLDASQIELAPAANAVQSLQGKVAGVSITQTSGQPGDGASVRLRGTTSLTGSSAPMYIVDGVILTGGLADIDALDIESIEVVKGAAASSLYGSRAQNGVIQITTKRGGNVAFNQTRVTFRNEFGSNQLPGDFQANNAHDLRVNATGDFVNSDGVKNTCETCFANGYGPGTVTDDIGATNPVSFYDKAYANSGTLNNNFDEFFQAGDTYTNYLAVSQNSAKTNFHASFTNFQEGGVLPGMDGFNRKSFR 380
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A7K1ZJT6_9BACT (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroidetes bacterium SB0668_bin_1 TaxID=2604896 RepID=A0A7K1ZJT6_9BACT) HSP 1 Score: 340 bits (871), Expect = 1.760e-105 Identity = 177/306 (57.84%), Postives = 228/306 (74.51%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSG-AFLDPDGNVIPYGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
VP+ + GQS L+ +IGYS Q++ +T+S T F L D LDEVVVTGV EATP KKLAFTV ++D + ++ AP S + + GK+AGASV+ SG PG+G+SVRLRGSTSI+GSSQPLYIVDGVILGA+QVDI ALD+E++E+VKGA+ASSLYGSRAQ GV+QI T+RG ++P+NQTRVT+RNE G N + + N SHN +N +G +F+D DGN IPYG T+ID SF DNPY G T++AF++FFNPGNT TN +++S+N TNF +SF NL E G++ G G+NRKSVR
Sbjct: 65 VPSVYA-GQSFDLKVQYIGYSPQTRAVTISPTAMTEHFVLAEDFFNLDEVVVTGVAEATPKKKLAFTVDQVDRDLVELAPARSPLHGLHGKVAGASVIAQSGQPGDGISVRLRGSTSISGSSQPLYIVDGVILGADQVDIDALDIENIEIVKGASASSLYGSRAQNGVLQISTKRGDHIPVNQTRVTIRNEIGTNFMPRKFIPNNSHNYRMNAAGTSFVDADGNDIPYGSATVIDGS-TAVSFLDNPYPGVTYNAFDEFFNPGNTWTNAIAVSRNTRTTNFLLSFANLTEEGIIVGQKGYNRKSVR 368
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A7K2CAQ1_9BACT (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A7K2CAQ1_9BACT) HSP 1 Score: 335 bits (859), Expect = 1.470e-103 Identity = 179/313 (57.19%), Postives = 231/313 (73.80%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSGAFLDPDGNVIP--------YGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
VP++ V G+++ L ++G+ +Q ++IT+S G T DF L D L+LD++VVTGV EATP KKLAFTVS++D E + AP ++ V S+QGK+AG +V +SGAPG SVRLRG+TS+TG +QPLYIVDGVILG+NQVD+ ALD+ +E+VKGAAASSLYGSRAQ GVI I T RG+ PLN TRVT+RNEFG++++ L AN SH+L V+ SG F+D G V YGPG + +Q NGA+FYDNPY G F+AFE+ F+PGNT TNYV +SQN+ KTNF SFTN+ E G + GLDG R+SVR
Sbjct: 63 VPSDHV-GETLELTARYVGFVEQVRSITISEGIMTEDFVLVVDFLQLDDIVVTGVAEATPRKKLAFTVSQVDGEDITLAPASNPVASIQGKVAGVAVQASSGAPGAVSSVRLRGATSVTGGNQPLYIVDGVILGSNQVDLDALDIADIEIVKGAAASSLYGSRAQNGVINITTNRGSATPLNTTRVTIRNEFGISNVAKTLEANTSHDLQVDASGNFVDNTGAVNSCDTCLSNGYGPGVVQEQNSNGAAFYDNPYQGTLFNAFEEVFDPGNTWTNYVGVSQNSSKTNFLASFTNVAEQGSILGLDGMKRRSVR 374
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A6L8CDB4_9BACT (SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Rhodothermaceae bacterium TaxID=2026787 RepID=A0A6L8CDB4_9BACT) HSP 1 Score: 327 bits (839), Expect = 9.750e-101 Identity = 177/313 (56.55%), Postives = 228/313 (72.84%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSGAFLDPDG--NVIP------YGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
VP++ V G+++ L ++G+ +Q ++IT+S G T DF LE D L+LD++VVTGV EATP KKLAFTVS++D E + AP + V S+QGK+AG +V+ SGAPG SVRLRG+TSITGS+QPLYIVDGV+LGANQVD ALD+ +E+VKGAAASSLYGSRAQ GVI I T+RG+ +PLNQTRVTVRNEFG++ + L AN SH+L V+ SG F+D G N P YGPG I + +GA+F+DNPY G + F+ FF+PGNT NYV +SQN+ KTNF SFTN+ E G + L+G R+S R
Sbjct: 63 VPSDHV-GETLDLTARYVGFVEQVRSITVSEGIMTEDFVLEVDFLQLDDIVVTGVAEATPRKKLAFTVSQVDGEDITLAPATNPVASIQGKVAGVAVMAGSGAPGATSSVRLRGATSITGSNQPLYIVDGVVLGANQVDFDALDIADIEIVKGAAASSLYGSRAQNGVINITTQRGSAMPLNQTRVTVRNEFGISDVAKSLQANTSHDLQVDASGNFVDGTGAINTCPNCLENGYGPGVIQEVNPHGAAFFDNPYQGTLHNGFDDFFDPGNTWINYVGVSQNSSKTNFLASFTNVAEQGSVLSLEGMKRRSFR 374
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A7C5KXV1_9GAMM (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5KXV1_9GAMM) HSP 1 Score: 292 bits (748), Expect = 9.540e-88 Identity = 156/305 (51.15%), Postives = 212/305 (69.51%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSGAFLDPDGNVIPYGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
+PA VKGQ V + FIGY + TI L G+ DF L D+L ++ +VVTGV + TP +KL+FTV+++ EQL+Q P +AV ++QGK+AG +V SG PG G+SV LR STSIT SS PL+IVDGVILG++QVDI ALD++S+EVVKGAAASSLYGSRAQ GVIQI T RG++ LNQTRV VR+E+G N L + +QSH VN +G ++D DGN++ +D+ ++ F DN + G +D E FF+PG+ N VS++ N+ KTNF S N+ EAG++ GL+G+ R++VR
Sbjct: 66 IPAARVKGQEVEISAKFIGYRESKATIVLQGGSIVKDFTLAEDVLNMEAIVVTGVIDETPREKLSFTVAQIGQEQLEQVPATNAVANLQGKVAGVRIVSGSGTPGTGLSVNLRASTSITKSSAPLFIVDGVILGSDQVDIDALDIQSIEVVKGAAASSLYGSRAQNGVIQITTNRGSSNALNQTRVRVRSEYGFNQLAKKIKLSQSHEFLVNENGDWVDADGNIVDR-----LDRVLDPDGFQDNQFKGPLYDNMELFFDPGDFNINLVSLTHNSQKTNFLASMGNVKEAGIIAGLEGYRRQNVR 365
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A496TRZ1_9BACT (Plug domain-containing protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A496TRZ1_9BACT) HSP 1 Score: 284 bits (727), Expect = 9.490e-85 Identity = 157/305 (51.48%), Postives = 211/305 (69.18%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSGAFLDPDGNVIPYGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
VP ++VKGQ VTL + F+GY TITL +GT T DF +E D+L +D VVVTG+ + TP KKLAFTV K++ E L+ AP +A +++GK+A A V G PG+GVS+RLRG+TSI+ S+ PL IVDGVI A+ DI A+D+ES+EVVKGAAASSLYGSRA AGVIQIKTRRG L LNQTR+ +RNE+G N + + ++ H+ VN F+D DGNV+ + + ++ + DN Y +T+D F+ +F+PG TN SIS N TNF VSFTN+ E+G+++ L G+NRK+ R
Sbjct: 72 VPGKYVKGQEVTLYSSFMGYKLAKTTITLKSGTITQDFVMELDVLDMDAVVVTGLIDETPRKKLAFTVDKVEKEALELAPAVNAGNAIRGKVASAVVRSGGGRPGDGVSIRLRGATSISLSNSPLIIVDGVITNASIRDIDAMDIESIEVVKGAAASSLYGSRAAAGVIQIKTRRGTGLKLNQTRILIRNEYGFNQIARMVKLSRHHHYKVNEHNQFIDNDGNVLKTFD-ELKRRVVDDDNIIDNEYE-KTYDQFDLYFDPGTFYTNTASISHNTRNTNFRVSFTNMQESGIVKALKGYNRKNAR 374
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A7C5Z7L8_9BACT (SusC/RagA family TonB-linked outer membrane protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C5Z7L8_9BACT) HSP 1 Score: 277 bits (709), Expect = 3.920e-82 Identity = 149/308 (48.38%), Postives = 214/308 (69.48%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAV---NGSGAFLDPDGNVIPYGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
+PA + G+ L FIGY ++ I LS G+ T DF+L+ D+L++D VVVTGV EATP L FTV+++ EQ++ P +SAV S+QGK++G ++VK SG PG+ +SVRLR +T+I GS+ PLYIVDGVILG++ VDI ALD+E++EVVKGAAA+SLYGSRA GVI IKT+RG L + +TR+ RNEFG+N ++SH V +G F+D GN + + +++D ++ G + DNP+ G+T+D + FF+PG TN V+ISQ+ TN+ +S +N+ E G++ GLDG+ R+SVR
Sbjct: 78 IPARHMTGRQGVLSAAFIGYHSDTEEIVLSPGSITVDFELKMDVLQMDAVVVTGVAEATPKTMLPFTVARVSNEQVEMVPASSAVASLQGKVSGVTMVKGSGKPGDAISVRLRTATTIQGSNAPLYIVDGVILGSSNVDIDALDIETIEVVKGAAAASLYGSRAANGVINIKTKRGNLLGVGETRIRFRNEFGLNQFVKKEYRSESHEYKVAEIDGQLEFVDDAGNKVDFAS-SVLDNDL-GYAIQDNPFPGKTYDHLDLFFDPGYFYTNTVTISQHKPGTNYLLSLSNMQETGIIDGLDGYGRQSVR 383
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A3M2BLS7_9BACT (SusC/RagA family TonB-linked outer membrane protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A3M2BLS7_9BACT) HSP 1 Score: 260 bits (664), Expect = 1.550e-77 Identity = 142/294 (48.30%), Postives = 197/294 (67.01%), Query Frame = 1
Query: 37 LRTGFIGYSDQSKTITLSAG-TQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSITGSSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVNGSGAFLDPDGNVIPYGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
L+ IGY D +T+T+SA T T + ++ L+L E+VVTGV TP KL FTV K+D E++ P SA + GK+ GA VV+ SG PG+G S+ LRG TSITGS PL IVDGVI DI ALDVES+E+VKGAAA+SLYGSRAQ GV+QI TRRG+NL +Q RVTVRNE+G+ L N + +++H + +G+++D DGN IP+GPG +++ +F DN ++G TFD ++FF+PG+ +NYV++ TN+ S +N E G++ G DGF+R++ R
Sbjct: 44 LKVQLIGYEDAVQTVTVSANQTTTVNIEMTATALQLQEIVVTGVAGETPRVKLPFTVEKVDFEEMP-VPQPSAEALIAGKVPGARVVRGSGKPGDGASILLRGPTSITGSQAPLIIVDGVITDNRLADIDALDVESIEIVKGAAAASLYGSRAQNGVVQITTRRGSNLRTDQARVTVRNEYGIQQLGNKIGLSKAHPYKIE-NGSYVDQDGNPIPFGPGVVLENGDPDITFQDNEFLGPTFDQIDRFFDPGDQFSNYVAVEGKTGTTNYRASLSNTREQGIVDGHDGFHRRNFR 335
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Match: A0A3C0ZPX9_9BACT (Plug domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3C0ZPX9_9BACT) HSP 1 Score: 246 bits (629), Expect = 3.510e-74 Identity = 139/322 (43.17%), Postives = 205/322 (63.66%), Query Frame = 1
Query: 1 VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVVVTGVTEATPTKKLAFTVSKLDTEQLQQAPGNSAVESMQGKIAGASVVKNSGAPGEGVSVRLRGSTSI--TG-SSQPLYIVDGVILGANQVDIGALDVESMEVVKGAAASSLYGSRAQAGVIQIKTRRGANLPLNQTRVTVRNEFGMNSLENDLVANQSHNLAVN---GSGAFLDPDGNVIP-----------YGPGTIIDQEINGASFYDNPYVGETFDAFEQFFNPGNTLTNYVSISQNNVKTNFHVSFTNLDEAGVLQGLDGFNRKSVR 915
+PA V+GQ TL FIGY +++ I LS G T DF L+ D+L L+EVVVTG T +KL F+V ++ + LQ P N+ +++GK+AG +++ SG PG +V++RG+TS+ TG S PLYIVDGVILG++ VD+ AL++ES+EVVKGAAASS+YGSRA AGV+QI T RGA+LP +TRVT+RNE+G N L N + ++H+ VN +++ + GPG + SF D PY G+T+D ++FF+PG +N ++++ + TNF ++F N +AGV++G DGF +++R
Sbjct: 82 IPASSVRGQQATLVVRFIGYKQKTEKIQLSPGIVTRDFALQEDVLGLEEVVVTGTIGGTFKEKLPFSVDRITSTDLQHVPANTPESAIRGKVAGVKIIQGSGQPGTAPAVQMRGATSVNTTGRSGGPLYIVDGVILGSSTVDLDALNIESIEVVKGAAASSIYGSRAAAGVVQITTNRGAHLPDGETRVTLRNEYGQNQLANKIPLTKAHHFKVNTARSDSPWVNYQSRTVARSARVSDTLWRIGPGGAVGSAFT--SFKDKPYPGKTYDQIDEFFDPGFYYSNAITVTHKSRNTNFLLAFNNRRDAGVIEGNDGFKNQTMR 401 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101993.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101993.1.1 >prot_L-digitata_M_contig101993.1.1 ID=prot_L-digitata_M_contig101993.1.1|Name=mRNA_L-digitata_M_contig101993.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp VPAEFVKGQSVTLRTGFIGYSDQSKTITLSAGTQTHDFQLETDLLRLDEVback to top mRNA from alignment at L-digitata_M_contig101993:4..918+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101993.1.1 ID=mRNA_L-digitata_M_contig101993.1.1|Name=mRNA_L-digitata_M_contig101993.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig101993:4..918+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101993:4..918+ >mRNA_L-digitata_M_contig101993.1.1 ID=mRNA_L-digitata_M_contig101993.1.1|Name=mRNA_L-digitata_M_contig101993.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig101993:4..918+ (Laminaria digitata LdigPH10_18mv male)back to top |