mRNA_L-digitata_M_contig101986.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A3D1R882_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3D1R882_9DELT) HSP 1 Score: 97.1 bits (240), Expect = 3.240e-19 Identity = 81/261 (31.03%), Postives = 126/261 (48.28%), Query Frame = 1
Query: 4 LEDGIRALQGKDFGAAKEVLGKAQSQMSQLEGEAKRRADRARRFGDVFGNKDGSKKAAQGLKQAR---PQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
+ D +AL +DF A + KA + L + +R+A +R F + K ++KA + K AR P +E V K++ +L P P +MS + Q+M L +++ + GA+ ++RAALD++ QLQ+ LE+ + G G G+P P+ G G G+ GG + EKV+IP ADQY+ P E+R+DI++A KQ E Y+D V+RYYEE+VK
Sbjct: 338 ISDLDKALAVEDFDQAAQAAAKALAHAKPLAEDFERQARESRHFPQAW--KKEAEKAQRNAKHAREAIPPLEEVRKELAELFPPPTQMMSESDIQKMKDLGEREGALQQKTGQMMEKMGRMNQQAPLFSPDAQQMMKQAGDRMGQAQRELRGRNPTGAIAEQRAALDQISQLQKGLEQGQKQGGGXX--PGIPWPW-MGPGMGRDNGGGMSSSNDEKVQIPGADQYQVPEEYRKDILDAMKQRAPEKYEDQVKRYYEEIVK 593
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A7I9VMH7_9DELT (Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. Red267 TaxID=2590199 RepID=A0A7I9VMH7_9DELT) HSP 1 Score: 95.9 bits (237), Expect = 9.830e-19 Identity = 103/262 (39.31%), Postives = 143/262 (54.58%), Query Frame = 1
Query: 1 RLEDGIRALQGKDFGAAKEVLGKAQSQMSQLEGEAKRRADRARRFGDVFGNKDGS--KKAAQGLKQARPQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLP-FGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
RL D +AL KD AA E + +A M +L + A R+ +KD ++A + A V +++K+ P P+S++ P+E+Q++S L ++Q XXXXXXXXXXXXXXXXX +A G++R ALD L + Q+ L++M ++ K QGG FG+ GG +G G DP SQEKVEIP AD +KAP EFR+D++EA KQGT E Y+ V+RYYEELVK
Sbjct: 779 RLADLQKALAAKDLDAALETVRRALPPMQRLAMDLGDEASMGERY-RALRSKDPRVLREAERHASGALGPTRKVRDELEKMFPDPKSVLGPKEQQRLSELSQEQGQXXXXXXXXXXXXXXXXXRAPVFPPQSQEMLEGSQGHMQRARGELAQKNAQRGHGEQRQALDDLSRFQRGLDEMAKNAKRGQGGXXXXXXXFGEEQGGREGD--GADP-SQEKVEIPGADAFKAPDEFRKDLLEAMKQGTPEPYQGEVKRYYEELVK 1036
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: F8CBK3_MYXFH (Uncharacterized protein n=30 Tax=Myxococcaceae TaxID=31 RepID=F8CBK3_MYXFH) HSP 1 Score: 95.1 bits (235), Expect = 1.800e-18 Identity = 83/264 (31.44%), Postives = 124/264 (46.97%), Query Frame = 1
Query: 4 LEDGIRALQGKDFGAAKEVLGKAQSQMSQLE--GEAKRRADRARRFGDVFGNKDG----SKKAAQGLKQARPQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
LE+ AL+ D+ A E +A+ QL GE +R D ++FGN + S + AQ L + V V + + L P P S +S +E+QQ+ L ++Q D G+++AAL+ LRQ QQ++++ GKG G+PLP G G + Q GRDP+ +KVE+P D ++AP EFR+D+++A KQG E Y++ V+RYYEELVK
Sbjct: 771 LENVESALKVNDYDLAAEAAARAEDAARQLAMMGEQQRHLD------EMFGNPEEVVKQSTELAQRLGRDARNVSEVNRQLQSLFPPPGSQLSQQEKQQLQQLSEQQSRLEERAQGLRQQMDEMQQMAPIFGEEATQQMEGAGQRMGEAARRMQGKDPGRGYGEQQAALEGLRQFQQQMQEGQRGGKG-----GLPLPMGMGR---RQQGNGRDPK--QKVELPDEDAFQAPKEFRKDLLDAMKQGAPEKYREQVKRYYEELVK 1018
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A0K1PHS2_9DELT (Plectin 1 isoform 8 n=1 Tax=Vulgatibacter incomptus TaxID=1391653 RepID=A0A0K1PHS2_9DELT) HSP 1 Score: 94.7 bits (234), Expect = 2.450e-18 Identity = 99/262 (37.79%), Postives = 127/262 (48.47%), Query Frame = 1
Query: 1 RLEDGIRALQGKDFGAAKEVLGKAQSQMSQLEGE-AKRRADR-ARRFGDVFGNKDGSKKAAQGLKQARPQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESG-KGSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
RLED AL KDF AA+E A + LE E A DR A + FG G QA P V V + +D+L SP MS E++++ L XXXXXXXXXX D GAL ER+A + L+ L+ +E+ E+ K GG GVP+PF G+GG G G D +EKV IP ADQYKAP EFR+DI++A K+ E ++D VR YY+E+VK
Sbjct: 789 RLEDLQNALAAKDFDAAQESAASALAHAQSLEQELAMAMRDRFAASEAEAFGKLHGH------ASQATPLVREVKEKLDQLVSSPSQRMSGEQQERARRLAXXXXXXXXXXXXXQGQAQKIGQQAPIFDDEARQRMSGAGRSMAEAESKLRGHDPGGALASERSAREHLQALKAGMEQAKENASKSGGGGSGVPVPFASGNGGKSGGRGQFD--GKEKVAIPNADQYKAPEEFRKDILDAMKKDAPEGFQDPVRDYYQEIVK 1042
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A3M1TY47_9DELT (DUF4175 family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1TY47_9DELT) HSP 1 Score: 85.1 bits (209), Expect = 4.670e-15 Identity = 72/260 (27.69%), Postives = 118/260 (45.38%), Query Frame = 1
Query: 1 RLEDGIRALQGKDFGAAKEVLGKAQSQMSQLEGEAKRRADRARRFGDVFGNKDGSKKAAQGLKQ-ARPQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
R++D L+ +DF A+ + LEG +R RR + + G + A+G + AR + E +LK +++L P P + ++R++M + +KQ DA A GQ++AA D+L +LQ+++E+ + G G GG +P+P +G G GR S + V+IP + Y+ P FR+++MEA K G + Y+ V+RYYEELVK
Sbjct: 736 RMKDTAMLLEARDFEEARRSVEAGLRSTQNLEGLLQREVIEMRRLRTLMQERLGKLEEARGHTEGARARAEEILKALEQLFPDPSEVFDRQDRRRMEQMARKQEALRQRAAKLQKQMEEIGRQAPVFSPSMEGMLQQAGRHMAEAQQQLQQSDARRAGGQQKAAADRLGELQKQMEEAMQRGGGGHGG--IPMPL---AGRRPGGSSGRLGMSHQPVKIPDEEAYEPPEAFRKELMEAMKDGAPKRYEREVKRYYEELVK 990
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A6I2GSZ6_9DELT (DUF4175 domain-containing protein n=2 Tax=Cystobacterineae TaxID=80811 RepID=A0A6I2GSZ6_9DELT) HSP 1 Score: 83.2 bits (204), Expect = 2.150e-14 Identity = 79/264 (29.92%), Postives = 115/264 (43.56%), Query Frame = 1
Query: 4 LEDGIRALQGKDFGAAKEVLGKAQSQMSQLE--GEAKRRADRARRFGDVFGN----KDGSKKAAQGLKQARPQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
L++ AL+ DF A E +AQS QL G+ +R D ++GN + S A+ L+Q +V V + + L P P S +S E+ Q+ L +Q D G+++ A++ L+Q QQ +++ SQ G GGQ ++G SQEKVE+P AD Y+AP EFR+D+++A KQG E YKD V+RYYEELVK
Sbjct: 820 LQNVENALKANDFDLAAEAAQRAQSAAEQLSMLGQQQRELD------VMWGNPPEVRQQSADLAKKLRQEGERVSDVSRKLQSLFPPPGSQLSAGEKDQLKKLAGQQQQLGEKAQSLREQMEEMEQMAPLFGEEAGEQMEGIGQKMGDAAQRMAGQDPQKGYGEQQGAMEALKQFQQAMKE-------SQRGXXXXXXXXXXMAGGQRRQGNGRDSSQEKVELPDADAYQAPKEFRQDLLDAMKQGAPEKYKDQVKRYYEELVK 1070
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: UPI00199D7D8E (Uncharacterized protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=UPI00199D7D8E) HSP 1 Score: 77.0 bits (188), Expect = 2.360e-12 Identity = 73/259 (28.19%), Postives = 119/259 (45.95%), Query Frame = 1
Query: 4 LEDGIRALQGKDFGAAKEVLGKAQSQMSQLEGEAKRRADRARRFGDVFGNKDGSKKAAQGLKQARPQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLPFGQGSG-GGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
L D L+ +DF A + +A+ ++E R R + G ++ + K+A+ + +V A+L +KL P+P ++S ++ QQ++ QKKQ G P A ER A + L QL+ LEK + +G+ GG G+PLP G G G + G S++ V IP+ D+ +A +R++++EAAKQ ++Y+DAVR+YYEEL+K
Sbjct: 448 LLDMDELLEQRDFSEAHQAGQQAEGNEHEMESMLDDRIQYGGR--ETRGQQESAAKSAKSALERTREVNALL---EKLFPAPRDVLSQDQMQQLARNQKKQSELQQQAQSLGQKMGKLSEQMPLFGGEQMGQLQAARGEMGKAVGQMQDGKLPSAAASERRAAEALGQLRDALEK---ASQGNDGG-GIPLPLGGGQRQSGNDKSGSSGDSSKQDVVIPQTDKNRAVPRYRQELLEAAKQKAPQNYEDAVRKYYEELIK 697
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A2H0MY81_9BACT (Uncharacterized protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_45_15 TaxID=1974048 RepID=A0A2H0MY81_9BACT) HSP 1 Score: 73.6 bits (179), Expect = 3.950e-11 Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 454 DAPGALGQERAALDKLRQLQQELEKMGESGK--GSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
D ++ R AL+ L++ ++ LE+M + G+ G QGG+ P+ G G Q Q GG +EKV +P DQYKAP EFREDIM+A K+ T +SY+ V YY+ELVK
Sbjct: 1003 DVNSSVSSGRKALNGLKKTKEMLEEMKKGGEEPGKQGGRNSPMKLGTGRAKDQ-QRGGSPRMEKEKVLLPSEDQYKAPQEFREDIMDAMKKFTPQSYERRVMEYYKELVK 1111
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A0G3A5U4_9DELT (Uncharacterized protein DUF4175 n=4 Tax=Archangium TaxID=47 RepID=A0A0G3A5U4_9DELT) HSP 1 Score: 72.0 bits (175), Expect = 1.290e-10 Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 454 DAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
DA G+++AAL+ L+Q QQ++++ SQ G + Q GRDPR +KVEIP + Y+AP EFR+D+++A K+GT E Y+D V+RYYEELVK
Sbjct: 951 DANRGYGEQQAALEGLKQFQQQMKE-------SQRGXXXXXXXXXXXXXXRQQGNGRDPR--DKVEIPDEEAYQAPKEFRKDLLDAMKEGTPEKYQDQVKRYYEELVK 1049
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Match: A0A250ICL5_9DELT (Uncharacterized protein n=2 Tax=Melittangium boletus TaxID=83453 RepID=A0A250ICL5_9DELT) HSP 1 Score: 68.6 bits (166), Expect = 1.880e-9 Identity = 120/258 (46.51%), Postives = 155/258 (60.08%), Query Frame = 1
Query: 22 ALQGKDFGAAKEVLGKAQSQMSQLE--GEAKRRADRARRFGDVFGN----KDGSKKAAQGLKQARPQVEAVLKDIDKLTPSPESLMSPEERQQMSGLQKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAPGALGQERAALDKLRQLQQELEKMGESGKGSQGGKGVPLPFGQGSGGGQGQEGGRDPRSQEKVEIPKADQYKAPAEFREDIMEAAKQGTVESYKDAVRRYYEELVK 777
AL+ DF A E +A L GE +R D +++GN + S + A+ L++ VE + + L P P S +SP+E+QQ+ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DA G+++AAL+ LRQ QQ++++ SQ G +DPR EKVEIP + Y+AP EFR+D+++A K+GT E Y+D V+RYYEELVK
Sbjct: 769 ALKVDDFDLAAEATQRAXXXXXXLASYGEQQRSLD------EMYGNPPDVRRQSAQLAEQLEKDARTVEDANRKLQSLFPPPGSQLSPQEKQQLQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQGKDANRGHGEQQAALEGLRQFQQQMKE-------SQRGXXXXXXXXXXXXXXXXXXXXQDPR--EKVEIPDEEAYQAPKEFRKDLLDAMKEGTPEKYRDQVKRYYEELVK 1011 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101986.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101986.1.1 >prot_L-digitata_M_contig101986.1.1 ID=prot_L-digitata_M_contig101986.1.1|Name=mRNA_L-digitata_M_contig101986.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=260bp RLEDGIRALQGKDFGAAKEVLGKAQSQMSQLEGEAKRRADRARRFGDVFGback to top mRNA from alignment at L-digitata_M_contig101986:6..785+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101986.1.1 ID=mRNA_L-digitata_M_contig101986.1.1|Name=mRNA_L-digitata_M_contig101986.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=780bp|location=Sequence derived from alignment at L-digitata_M_contig101986:6..785+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101986:6..785+ >mRNA_L-digitata_M_contig101986.1.1 ID=mRNA_L-digitata_M_contig101986.1.1|Name=mRNA_L-digitata_M_contig101986.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=780bp|location=Sequence derived from alignment at L-digitata_M_contig101986:6..785+ (Laminaria digitata LdigPH10_18mv male)back to top |