mRNA_L-digitata_M_contig101968.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 2.570e-18 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 7 KQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTASTMSAEV 273
KQCWCG + D+D +G CDMPC G+ GETCGG +AM++YEN+ D GE P +LGC+ D +R+ +++ M+AE+
Sbjct: 281 KQCWCGAEGADYDANGAGV-CDMPCGGDAGETCGGFYAMSIYENDADDGESDD-------PSYLGCYSDPADSRVFVQGVSSAAMTAEI 361
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A6H5KQV8_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV8_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.790e-17 Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 10 QCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTASTMSAEV 273
+CWCG + D+D +G CDMPC G+ GETCGG +AM++YE++ DGGE P +LGC+ D +R+ ++ +M+AEV
Sbjct: 24 RCWCGAEGADYDANGAGV-CDMPCGGDAGETCGGFYAMSIYEHDVDGGESDD-------PSYLGCYSDPADSRVFEQKISSDSMTAEV 103
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A6H5K060_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K060_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 7.200e-13 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 4 TKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTASTMSAEV 273
+KQCWCG D+D +G CDM C+G++ ETCGG +AM+VYEN D G +LGC+ D +RI TA M++E+
Sbjct: 28 SKQCWCG-DNVDYDANGEGV-CDMACSGDSSETCGGFYAMSVYENPDDSG-------------YLGCYSDPADSRIFDLVATADDMTSEI 102
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A225A921_9EURO (Uncharacterized protein n=1 Tax=Talaromyces atroroseus TaxID=1441469 RepID=A0A225A921_9EURO) HSP 1 Score: 69.7 bits (169), Expect = 6.750e-12 Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = 1
Query: 1 HTKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTAST 258
+T QC+CG + T+C+MPC G++ ETCGG ++VY NN TP ++ G ++LGC+ D A R ++ YT S+
Sbjct: 584 YTTQCFCGTGLSSSSTEAAKTDCNMPCGGDSTETCGGANILSVYTNNN---YVTPGGATIPGYQYLGCYNDTAAARSLSSTYTYSS 666
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A364KVR0_9EURO (Uncharacterized protein n=1 Tax=Talaromyces amestolkiae TaxID=1196081 RepID=A0A364KVR0_9EURO) HSP 1 Score: 69.7 bits (169), Expect = 6.810e-12 Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 1 HTKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTAS 255
+T QC+CG T+C+MPC G++ ETCGG ++VY NN TP ++ G ++LGC+ D A R ++G YT S
Sbjct: 1309 YTTQCFCGTTLGSSGTEAAETDCNMPCGGDSTETCGGPNRLSVYTNNN---YVTPGGATIPGYKYLGCYNDTAAARSLSGTYTYS 1390
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: D7FH79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH79_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 2.950e-11 Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 1 HTKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTASTMSAEV 273
++ +CWCG D+D +G CDM C+G++ +TCGG +AM+VYEN D G +LGC+ D +RI T+ M++E+
Sbjct: 57 YSSECWCG-DNVDYDANGEGV-CDMACSGDSSQTCGGFYAMSVYENPDDSG-------------YLGCYSDPADSRIFELVATSDDMTSEI 132
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A6H5KHE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE9_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 9.210e-11 Identity = 30/86 (34.88%), Postives = 43/86 (50.00%), Query Frame = 1
Query: 13 CWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTASTMSAE 270
CWCG + V+G CDMPC+GN+ E+CGG ++M VY + P +LGCF D R+ + + M+AE
Sbjct: 9 CWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQD---------------PAYLGCFSDPADGRMFVWESSNTAMTAE 78
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A6H5KL84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL84_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.400e-10 Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 1
Query: 1 HTKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTASTMSAE 270
++++CWCG + V+G CDMPC+GN+ E+CGG ++M VY + P +LGCF D R+ + + M+AE
Sbjct: 151 YSRECWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQD---------------PAYLGCFSDPADGRMFVWESSNTAMTAE 224
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A6H5KAS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS7_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 2.190e-10 Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 1
Query: 1 HTKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGGEPTPAPVSVGGPEFLGCFGDVKANRIMTGPYTASTMSAE 270
++++CWCG + V+G CDMPC+GN+ E+CGG ++M VY + P +LGCF D R+ + + M+AE
Sbjct: 132 YSRECWCGDINAQYSVNGVGV-CDMPCSGNSEESCGGSYSMDVYAQD---------------PAYLGCFSDPADGRMFVWESSNTAMTAE 205
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Match: A0A6H5JU45_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU45_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 7.300e-10 Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 HTKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGD 147
++++CWCG + D+D +G CDMPC G+ E CGG +A++VYEN+G+
Sbjct: 149 YSEECWCGAEGADYDANGAGV-CDMPCGGDADEICGGFYAISVYENDGE 196 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101968.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101968.1.1 >prot_L-digitata_M_contig101968.1.1 ID=prot_L-digitata_M_contig101968.1.1|Name=mRNA_L-digitata_M_contig101968.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=91bp HTKQCWCGGQRTDFDVHGPATNCDMPCAGNTGETCGGRFAMTVYENNGDGback to top mRNA from alignment at L-digitata_M_contig101968:216..488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101968.1.1 ID=mRNA_L-digitata_M_contig101968.1.1|Name=mRNA_L-digitata_M_contig101968.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=273bp|location=Sequence derived from alignment at L-digitata_M_contig101968:216..488+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101968:216..488+ >mRNA_L-digitata_M_contig101968.1.1 ID=mRNA_L-digitata_M_contig101968.1.1|Name=mRNA_L-digitata_M_contig101968.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=273bp|location=Sequence derived from alignment at L-digitata_M_contig101968:216..488+ (Laminaria digitata LdigPH10_18mv male)back to top |