mRNA_L-digitata_M_contig101893.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101893.1.1
Unique NamemRNA_L-digitata_M_contig101893.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A520NUJ4_9PROT (CoA_binding domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NUJ4_9PROT)

HSP 1 Score: 469 bits (1207), Expect = 3.790e-163
Identity = 235/265 (88.68%), Postives = 250/265 (94.34%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
            DVFEFLATD+ T AIFFYLESLRRPR FIEIA+ VTPKKPVI+LKGGAT DGA AALSHTAS+GSDDRILDGALRQAGVVRIDEFSHLFLAAKA+APMPVPAGNRVGFVSPSGAFIVHISDLCRQR NL FPDL  +TMDRLKEISPPFIRLSNPVDIFPSATVHGME+AYREAMEAV  DPNVDAVVSIMILT+ELGMPSLDFIPELA K+PKKP+YISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALD+L +A ++LK+
Sbjct:  200 DVFEFLATDRHTKAIFFYLESLRRPRKFIEIAKQVTPKKPVIVLKGGATADGAKAALSHTASMGSDDRILDGALRQAGVVRIDEFSHLFLAAKAVAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRFNLIFPDLMPRTMDRLKEISPPFIRLSNPVDIFPSATVHGMEFAYREAMEAVLADPNVDAVVSIMILTRELGMPSLDFIPELAKKHPKKPIYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDVLAQARKSLKK 464          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2D8PRJ2_9PROT (CoA_binding domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PRJ2_9PROT)

HSP 1 Score: 452 bits (1163), Expect = 1.890e-156
Identity = 233/264 (88.26%), Postives = 243/264 (92.05%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
            DVFEFLA D  T  IFFYLESLRRPR+F+EIA+ VTPKKPVI+LKGGAT DGA AALSHTAS+GSDDRILDGALRQAGVVRIDEFS LFLAAKA APMPVPAGNRVGFVSPSGAFIVHISDLCRQRL L FP LT KTM+RLK+ISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAV KD NVDAVVSIMILT+ELGMPSLDFIPELA K+PKKPVYISFSGD  CN EAKAFLEPRGVPTFPLIEDAFKALDILVRA Q+LK
Sbjct:  201 DVFEFLADDPYTKTIFFYLESLRRPREFVEIAKRVTPKKPVIVLKGGATADGAKAALSHTASMGSDDRILDGALRQAGVVRIDEFSDLFLAAKAAAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLGLEFPALTDKTMNRLKDISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVLKDRNVDAVVSIMILTRELGMPSLDFIPELARKHPKKPVYISFSGDADCNAEAKAFLEPRGVPTFPLIEDAFKALDILVRARQSLK 464          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2S6Q8S2_9PROT (CoA_binding domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q8S2_9PROT)

HSP 1 Score: 452 bits (1162), Expect = 2.590e-156
Identity = 226/265 (85.28%), Postives = 248/265 (93.58%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
            DVFEFL+TDK T +IFFYLE++RRPR+FIEIA+ VTP+KPVILLKGGAT DGAAAALSHTAS+GSDDRILDGALRQAG+VRI+EFSHLFLAAKA+A MP+PAGNRVGFVSPSGAFIVHI+DLCRQRLNL FP+L + TM RL EISPPFIRL NPVDIFPSATVHGME+AY+EAMEAV KDPNVDAVVSIMILTKELGMP+LDFIP+LA K+  KPVYISFSG+HACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRA Q LK+
Sbjct:  200 DVFEFLSTDKHTKSIFFYLENIRRPREFIEIAKQVTPEKPVILLKGGATADGAAAALSHTASMGSDDRILDGALRQAGIVRIEEFSHLFLAAKAVASMPIPAGNRVGFVSPSGAFIVHINDLCRQRLNLCFPELESTTMGRLMEISPPFIRLGNPVDIFPSATVHGMEFAYQEAMEAVLKDPNVDAVVSIMILTKELGMPALDFIPKLAKKHRSKPVYISFSGEHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRARQFLKK 464          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A1Z9EQM8_9FLAO (CoA_binding domain-containing protein n=1 Tax=Flavobacteriales bacterium TMED123 TaxID=1986721 RepID=A0A1Z9EQM8_9FLAO)

HSP 1 Score: 368 bits (944), Expect = 5.940e-123
Identity = 183/264 (69.32%), Postives = 217/264 (82.20%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
            DV  +LA D +T+ IF YLESL RP +F++IAR VT KKPVI+LKGGAT DGA AA+SHTASLGSDD ILDGAL+QAGVVRIDEF+HLF AAKA A MP+PAGNR+GFVSPSGAFIVHISD+C+QR  L F  + AKT  RL+EISPPFI ++NPVD+FPSATV+GME+A+RE+M A+ +DPNVDAVV+I+IL  ELG  +L+FI +    YP KP+YISFSGD   N  AKAFLEP+GVPTFP IED FK LDILVR  ++LK
Sbjct:  223 DVLSYLADDPKTETIFIYLESLHRPHEFLKIARRVTRKKPVIMLKGGATEDGAKAAMSHTASLGSDDNILDGALKQAGVVRIDEFTHLFTAAKAAAMMPIPAGNRIGFVSPSGAFIVHISDICKQRTRLEFSQIKAKTQARLEEISPPFINITNPVDVFPSATVNGMEFAWRESMRALLQDPNVDAVVAILILADELGEMNLNFIVDQKKDYPDKPIYISFSGDECSNAAAKAFLEPKGVPTFPRIEDPFKVLDILVRCRESLK 486          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2E6GM49_9PROT (CoA_binding domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GM49_9PROT)

HSP 1 Score: 360 bits (924), Expect = 6.290e-120
Identity = 180/263 (68.44%), Postives = 216/263 (82.13%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQAL 789
            DV EFLA D +T +IF YLESL RP+ F++IAR VT  KPV++LKGGAT  GA AA+SHTASLGSDD +LDGAL+QAGVVRIDEF++LF AAKA A MP+PAGNRVGFVSPSGAFIVHISD+C QR +L F  + A T  RL++ISPPFI +SNPVD+FPSATV+GME+A+REAM A+ KDPNVDAVV+I+IL  ELG   LDFI +L  ++P+KP+YISFSGD   N  AK+FLEP+GVPTFP IED FK LDILV+  ++L
Sbjct:  223 DVLEFLADDPKTKSIFIYLESLHRPQTFLKIARKVTRTKPVVMLKGGATEGGAKAAMSHTASLGSDDNVLDGALKQAGVVRIDEFTYLFTAAKAAAMMPIPAGNRVGFVSPSGAFIVHISDICHQRTDLVFSKIAAATQKRLEDISPPFINISNPVDVFPSATVNGMEFAWREAMTALLKDPNVDAVVAILILADELGEMKLDFILDLKRRFPEKPIYISFSGDENSNAAAKSFLEPKGVPTFPRIEDPFKVLDILVQCRKSL 485          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2E5V571_9PROT (CoA_binding domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5V571_9PROT)

HSP 1 Score: 350 bits (898), Expect = 2.470e-116
Identity = 176/263 (66.92%), Postives = 213/263 (80.99%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQAL 789
            DV EFLA D++T AIF YLESL RP++F++IAR VT KKPVI+LKGGAT  GA AA+SHTASLG++D+ILDGALRQAG++RIDEFSHLF AAKA A MPVP GNRVGFVSPSGAFIVH+SD+C+QR  L F  +T++T  RL+EISP FI ++NPVD+FPSATV+GME+A+RE+MEA+  D NVDAVV+I+IL KEL    L FI +   ++P KP+YISFSGD   N  AK FLEPRGVPTFP IED FK LDI+ +   +L
Sbjct:  198 DVLEFLAYDRETKAIFIYLESLHRPQEFLKIARMVTRKKPVIMLKGGATEAGAKAAMSHTASLGANDKILDGALRQAGIIRIDEFSHLFTAAKAAAMMPVPTGNRVGFVSPSGAFIVHLSDICKQRTCLDFSSVTSETQLRLEEISPSFINITNPVDVFPSATVNGMEFAWRESMEALLNDDNVDAVVTILILAKELEAMDLHFIVDQKNRFPTKPIYISFSGDEVLNAAAKNFLEPRGVPTFPRIEDPFKVLDIMAQCRSSL 460          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2E3K5Y9_9PROT (CoA_binding domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3K5Y9_9PROT)

HSP 1 Score: 346 bits (888), Expect = 9.980e-115
Identity = 175/264 (66.29%), Postives = 208/264 (78.79%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
            DV  +LA DK+T  IF YLESLRRPR FI +A+ VT  K VI+LKGG T +GA AA SHTASLGSDD++LDGAL QAGVVR+DEFSHLF AAKA A MPVP G RVGFVSPSGAFIVHISD+C+QR  L FP     T  RL+EISPPFI +SNP DIFP+ATV+GME+A+REAM A+  DP +D+VV+I+IL  ELG  SL+FIPELA ++P+KP+Y+S+SGD   N  A AFLEP GVPTFP IED FKAL+I+  A + L+
Sbjct:  205 DVLGYLADDKETKTIFLYLESLRRPRQFIRVAKKVTRVKAVIMLKGGTTKEGALAAQSHTASLGSDDKVLDGALAQAGVVRVDEFSHLFTAAKAAAMMPVPKGPRVGFVSPSGAFIVHISDICKQRTLLEFPKPAKHTQKRLEEISPPFISISNPADIFPAATVNGMEFAWREAMRALLLDPRIDSVVTILILADELGKMSLEFIPELAKEFPEKPIYVSYSGDENSNRAATAFLEPEGVPTFPRIEDPFKALNIMASARKFLR 468          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A848ZPZ0_9DELT (CoA_binding domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848ZPZ0_9DELT)

HSP 1 Score: 342 bits (876), Expect = 5.750e-113
Identity = 167/265 (63.02%), Postives = 211/265 (79.62%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
            DV E+LA D +T AIF YLES +RP+ F+EIA  VT KKP+ILLKGG T +GA AA++HTA+L SDDRI+DGAL+QAG+ R+ ++SHLFLAAKAIA MP+P GNRV F+ PSGA +V ++DLCR RL L  PDL  KT  RL+EISPPFIR+ NPVDI+ SATVHG+E+ YRE MEAV KD N+D VV I++LT + G+PSLDFI ++A +YP KP+Y++FSG+    E +KAFLEPRGVPTFPLIE+ F+ L IL R  +A++R
Sbjct:  199 DVLEYLAEDPETKAIFTYLESFKRPKRFMEIAHEVTRKKPIILLKGGQTEEGAQAAVAHTAALASDDRIIDGALKQAGIARVYKYSHLFLAAKAIATMPLPKGNRVSFLGPSGAMLVVLTDLCRHRLGLEVPDLEEKTRQRLQEISPPFIRMRNPVDIWASATVHGVEFGYREGMEAVLKDSNIDVVVPILMLTDDTGVPSLDFIVDMAERYPDKPIYVTFSGEKKHMEASKAFLEPRGVPTFPLIEEPFEVLSILARCRKAMER 463          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A661LMJ5_9DELT (CoA_binding domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661LMJ5_9DELT)

HSP 1 Score: 340 bits (871), Expect = 3.080e-112
Identity = 167/264 (63.26%), Postives = 214/264 (81.06%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
            +V E+L  D++T AIF YLESL+RP  F+EIAR VT  KPVILLKGGAT +GA AA++HTA+L SDDRI++GAL +AG+VRI ++SH+FLAAKA+A MP+P GNRV F++PSGA +V ++DLC++ L L  PDL  +   RL+EISPP+IR+ NPVDI+PSA +HG+EYAYREA+EAV +DPN+DAVV I++LTKE G+P LDFI ELA  YP+KP+YI+FSGD    + AKAFLEPRGVPTFPLIE+ F+ L IL R   A++
Sbjct:  198 EVLEYLGRDQETKAIFIYLESLKRPAQFLEIARKVTRTKPVILLKGGATYEGARAAVAHTAALASDDRIINGALNKAGIVRIQKYSHMFLAAKALAVMPLPNGNRVSFMAPSGAMLVILTDLCQRDLGLRVPDLEQENRRRLQEISPPYIRMRNPVDIWPSAALHGVEYAYREAIEAVLRDPNIDAVVPILMLTKETGIPPLDFIVELAGLYPEKPIYITFSGDKRHMDAAKAFLEPRGVPTFPLIEEPFEVLSILARCKMAME 461          
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A1V1WVH8_9DELT (CoA_binding domain-containing protein n=1 Tax=Desulfobacterales bacterium S7086C20 TaxID=1869302 RepID=A0A1V1WVH8_9DELT)

HSP 1 Score: 327 bits (839), Expect = 2.240e-107
Identity = 161/265 (60.75%), Postives = 211/265 (79.62%), Query Frame = 1
Query:    1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
            +V E+ A D +T AIF YLES +RP+ F+EIA  +T  KPVILLKGG T +G+ AA++HTA+L SDDRI+DGAL++AG+ RI ++SHLFLAAKA+A MP+P GNRV F++PSGA +V ++DLC+Q L L+ PDL   T +RL+EISPP+IR+ NPVDI+PSA ++G+EYAYRE MEAV KDP +DAVV I++LT E G+P LDFI EL   YP+KP+Y++FSGD    E +KAFLEPRGVPTFPLIE+ F+ L IL +  +A++R
Sbjct:  199 EVLEYYAGDPETKAIFIYLESFKRPQRFLEIASEITRVKPVILLKGGRTAEGSRAAVAHTAALASDDRIVDGALKRAGITRIYKYSHLFLAAKALAAMPLPKGNRVSFMAPSGAMLVVLTDLCQQDLGLSVPDLEEPTRERLQEISPPYIRMRNPVDIWPSAALNGVEYAYREGMEAVLKDPMIDAVVPILMLTDETGVPPLDFIIELVRLYPEKPIYVTFSGDKKHMEASKAFLEPRGVPTFPLIEEPFEVLSILNQCRKAMER 463          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A520NUJ4_9PROT3.790e-16388.68CoA_binding domain-containing protein n=2 Tax=Rhod... [more]
A0A2D8PRJ2_9PROT1.890e-15688.26CoA_binding domain-containing protein n=1 Tax=Rhod... [more]
A0A2S6Q8S2_9PROT2.590e-15685.28CoA_binding domain-containing protein n=1 Tax=Alph... [more]
A0A1Z9EQM8_9FLAO5.940e-12369.32CoA_binding domain-containing protein n=1 Tax=Flav... [more]
A0A2E6GM49_9PROT6.290e-12068.44CoA_binding domain-containing protein n=1 Tax=Rhod... [more]
A0A2E5V571_9PROT2.470e-11666.92CoA_binding domain-containing protein n=2 Tax=Rhod... [more]
A0A2E3K5Y9_9PROT9.980e-11566.29CoA_binding domain-containing protein n=1 Tax=Rhod... [more]
A0A848ZPZ0_9DELT5.750e-11363.02CoA_binding domain-containing protein n=1 Tax=Desu... [more]
A0A661LMJ5_9DELT3.080e-11263.26CoA_binding domain-containing protein n=1 Tax=Delt... [more]
A0A1V1WVH8_9DELT2.240e-10760.75CoA_binding domain-containing protein n=1 Tax=Desu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101893contigL-digitata_M_contig101893:1..798 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog186497.PF1838
PFAMsCoA_binding_2,Succ_CoA_lig
Model size798
Max annot lvl183968|Thermococci
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.6e-41
EggNOG OGsCOG1042@1|root,arCOG01340@2157|Archaea,2XT9G@28890|Euryarchaeota,243Q6@183968|Thermococci
DescriptionCoA binding domain
Cds size798
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406624.0846057-CDS-L-digitata_M_contig101893:0..7981682406624.0846057-CDS-L-digitata_M_contig101893:0..798Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101893 1..798 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101893.1.1prot_L-digitata_M_contig101893.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101893 1..798 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101893.1.1

>prot_L-digitata_M_contig101893.1.1 ID=prot_L-digitata_M_contig101893.1.1|Name=mRNA_L-digitata_M_contig101893.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=266bp
DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATP
DGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPV
PAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFI
RLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMP
SLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAF
KALDILVRAGQALKR*
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mRNA from alignment at L-digitata_M_contig101893:1..798+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101893.1.1 ID=mRNA_L-digitata_M_contig101893.1.1|Name=mRNA_L-digitata_M_contig101893.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=798bp|location=Sequence derived from alignment at L-digitata_M_contig101893:1..798+ (Laminaria digitata LdigPH10_18mv male)
GACGTGTTCGAGTTCCTGGCGACCGACAAACAAACGGACGCGATATTTTT CTATCTCGAAAGTCTGCGCCGCCCGCGCGATTTCATCGAGATTGCCCGCA CGGTAACGCCCAAAAAACCGGTTATCCTGCTTAAAGGCGGGGCAACGCCG GACGGCGCCGCCGCCGCATTGTCGCACACCGCGTCGCTGGGATCGGACGA TCGTATTCTCGACGGCGCCCTGCGCCAGGCAGGCGTGGTGCGGATCGATG AATTCTCTCACCTGTTCCTGGCGGCAAAGGCCATCGCCCCAATGCCGGTG CCGGCCGGCAACCGGGTCGGTTTCGTATCGCCGTCGGGCGCGTTTATCGT CCATATCAGCGATCTTTGCCGCCAGCGGCTGAACCTGACCTTCCCGGACC TGACGGCAAAGACGATGGACCGGCTGAAGGAAATCAGCCCGCCATTCATC CGGCTCAGCAATCCTGTCGATATCTTCCCGAGTGCGACCGTGCACGGCAT GGAATATGCCTACCGGGAGGCAATGGAGGCCGTGTTCAAGGACCCGAACG TCGATGCGGTAGTGTCGATCATGATCCTGACCAAGGAGCTGGGCATGCCG TCGCTCGACTTCATCCCGGAGCTTGCGGCCAAATACCCGAAGAAACCCGT CTATATTTCCTTTAGCGGCGACCATGCCTGCAACGAGGAAGCCAAGGCGT TTCTCGAGCCGCGCGGTGTGCCGACCTTCCCGTTGATCGAGGATGCGTTC AAGGCGCTGGATATACTGGTGCGCGCCGGTCAGGCATTGAAACGCTGA
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Coding sequence (CDS) from alignment at L-digitata_M_contig101893:1..798+

>mRNA_L-digitata_M_contig101893.1.1 ID=mRNA_L-digitata_M_contig101893.1.1|Name=mRNA_L-digitata_M_contig101893.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=798bp|location=Sequence derived from alignment at L-digitata_M_contig101893:1..798+ (Laminaria digitata LdigPH10_18mv male)
GACGTGTTCGAGTTCCTGGCGACCGACAAACAAACGGACGCGATATTTTT
CTATCTCGAAAGTCTGCGCCGCCCGCGCGATTTCATCGAGATTGCCCGCA
CGGTAACGCCCAAAAAACCGGTTATCCTGCTTAAAGGCGGGGCAACGCCG
GACGGCGCCGCCGCCGCATTGTCGCACACCGCGTCGCTGGGATCGGACGA
TCGTATTCTCGACGGCGCCCTGCGCCAGGCAGGCGTGGTGCGGATCGATG
AATTCTCTCACCTGTTCCTGGCGGCAAAGGCCATCGCCCCAATGCCGGTG
CCGGCCGGCAACCGGGTCGGTTTCGTATCGCCGTCGGGCGCGTTTATCGT
CCATATCAGCGATCTTTGCCGCCAGCGGCTGAACCTGACCTTCCCGGACC
TGACGGCAAAGACGATGGACCGGCTGAAGGAAATCAGCCCGCCATTCATC
CGGCTCAGCAATCCTGTCGATATCTTCCCGAGTGCGACCGTGCACGGCAT
GGAATATGCCTACCGGGAGGCAATGGAGGCCGTGTTCAAGGACCCGAACG
TCGATGCGGTAGTGTCGATCATGATCCTGACCAAGGAGCTGGGCATGCCG
TCGCTCGACTTCATCCCGGAGCTTGCGGCCAAATACCCGAAGAAACCCGT
CTATATTTCCTTTAGCGGCGACCATGCCTGCAACGAGGAAGCCAAGGCGT
TTCTCGAGCCGCGCGGTGTGCCGACCTTCCCGTTGATCGAGGATGCGTTC
AAGGCGCTGGATATACTGGTGCGCGCCGGTCAGGCATTGAAACGCTGA
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