mRNA_L-digitata_M_contig101893.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A520NUJ4_9PROT (CoA_binding domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NUJ4_9PROT) HSP 1 Score: 469 bits (1207), Expect = 3.790e-163 Identity = 235/265 (88.68%), Postives = 250/265 (94.34%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
DVFEFLATD+ T AIFFYLESLRRPR FIEIA+ VTPKKPVI+LKGGAT DGA AALSHTAS+GSDDRILDGALRQAGVVRIDEFSHLFLAAKA+APMPVPAGNRVGFVSPSGAFIVHISDLCRQR NL FPDL +TMDRLKEISPPFIRLSNPVDIFPSATVHGME+AYREAMEAV DPNVDAVVSIMILT+ELGMPSLDFIPELA K+PKKP+YISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALD+L +A ++LK+
Sbjct: 200 DVFEFLATDRHTKAIFFYLESLRRPRKFIEIAKQVTPKKPVIVLKGGATADGAKAALSHTASMGSDDRILDGALRQAGVVRIDEFSHLFLAAKAVAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRFNLIFPDLMPRTMDRLKEISPPFIRLSNPVDIFPSATVHGMEFAYREAMEAVLADPNVDAVVSIMILTRELGMPSLDFIPELAKKHPKKPIYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDVLAQARKSLKK 464
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2D8PRJ2_9PROT (CoA_binding domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PRJ2_9PROT) HSP 1 Score: 452 bits (1163), Expect = 1.890e-156 Identity = 233/264 (88.26%), Postives = 243/264 (92.05%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
DVFEFLA D T IFFYLESLRRPR+F+EIA+ VTPKKPVI+LKGGAT DGA AALSHTAS+GSDDRILDGALRQAGVVRIDEFS LFLAAKA APMPVPAGNRVGFVSPSGAFIVHISDLCRQRL L FP LT KTM+RLK+ISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAV KD NVDAVVSIMILT+ELGMPSLDFIPELA K+PKKPVYISFSGD CN EAKAFLEPRGVPTFPLIEDAFKALDILVRA Q+LK
Sbjct: 201 DVFEFLADDPYTKTIFFYLESLRRPREFVEIAKRVTPKKPVIVLKGGATADGAKAALSHTASMGSDDRILDGALRQAGVVRIDEFSDLFLAAKAAAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLGLEFPALTDKTMNRLKDISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVLKDRNVDAVVSIMILTRELGMPSLDFIPELARKHPKKPVYISFSGDADCNAEAKAFLEPRGVPTFPLIEDAFKALDILVRARQSLK 464
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2S6Q8S2_9PROT (CoA_binding domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q8S2_9PROT) HSP 1 Score: 452 bits (1162), Expect = 2.590e-156 Identity = 226/265 (85.28%), Postives = 248/265 (93.58%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
DVFEFL+TDK T +IFFYLE++RRPR+FIEIA+ VTP+KPVILLKGGAT DGAAAALSHTAS+GSDDRILDGALRQAG+VRI+EFSHLFLAAKA+A MP+PAGNRVGFVSPSGAFIVHI+DLCRQRLNL FP+L + TM RL EISPPFIRL NPVDIFPSATVHGME+AY+EAMEAV KDPNVDAVVSIMILTKELGMP+LDFIP+LA K+ KPVYISFSG+HACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRA Q LK+
Sbjct: 200 DVFEFLSTDKHTKSIFFYLENIRRPREFIEIAKQVTPEKPVILLKGGATADGAAAALSHTASMGSDDRILDGALRQAGIVRIEEFSHLFLAAKAVASMPIPAGNRVGFVSPSGAFIVHINDLCRQRLNLCFPELESTTMGRLMEISPPFIRLGNPVDIFPSATVHGMEFAYQEAMEAVLKDPNVDAVVSIMILTKELGMPALDFIPKLAKKHRSKPVYISFSGEHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRARQFLKK 464
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A1Z9EQM8_9FLAO (CoA_binding domain-containing protein n=1 Tax=Flavobacteriales bacterium TMED123 TaxID=1986721 RepID=A0A1Z9EQM8_9FLAO) HSP 1 Score: 368 bits (944), Expect = 5.940e-123 Identity = 183/264 (69.32%), Postives = 217/264 (82.20%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
DV +LA D +T+ IF YLESL RP +F++IAR VT KKPVI+LKGGAT DGA AA+SHTASLGSDD ILDGAL+QAGVVRIDEF+HLF AAKA A MP+PAGNR+GFVSPSGAFIVHISD+C+QR L F + AKT RL+EISPPFI ++NPVD+FPSATV+GME+A+RE+M A+ +DPNVDAVV+I+IL ELG +L+FI + YP KP+YISFSGD N AKAFLEP+GVPTFP IED FK LDILVR ++LK
Sbjct: 223 DVLSYLADDPKTETIFIYLESLHRPHEFLKIARRVTRKKPVIMLKGGATEDGAKAAMSHTASLGSDDNILDGALKQAGVVRIDEFTHLFTAAKAAAMMPIPAGNRIGFVSPSGAFIVHISDICKQRTRLEFSQIKAKTQARLEEISPPFINITNPVDVFPSATVNGMEFAWRESMRALLQDPNVDAVVAILILADELGEMNLNFIVDQKKDYPDKPIYISFSGDECSNAAAKAFLEPKGVPTFPRIEDPFKVLDILVRCRESLK 486
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2E6GM49_9PROT (CoA_binding domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GM49_9PROT) HSP 1 Score: 360 bits (924), Expect = 6.290e-120 Identity = 180/263 (68.44%), Postives = 216/263 (82.13%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQAL 789
DV EFLA D +T +IF YLESL RP+ F++IAR VT KPV++LKGGAT GA AA+SHTASLGSDD +LDGAL+QAGVVRIDEF++LF AAKA A MP+PAGNRVGFVSPSGAFIVHISD+C QR +L F + A T RL++ISPPFI +SNPVD+FPSATV+GME+A+REAM A+ KDPNVDAVV+I+IL ELG LDFI +L ++P+KP+YISFSGD N AK+FLEP+GVPTFP IED FK LDILV+ ++L
Sbjct: 223 DVLEFLADDPKTKSIFIYLESLHRPQTFLKIARKVTRTKPVVMLKGGATEGGAKAAMSHTASLGSDDNVLDGALKQAGVVRIDEFTYLFTAAKAAAMMPIPAGNRVGFVSPSGAFIVHISDICHQRTDLVFSKIAAATQKRLEDISPPFINISNPVDVFPSATVNGMEFAWREAMTALLKDPNVDAVVAILILADELGEMKLDFILDLKRRFPEKPIYISFSGDENSNAAAKSFLEPKGVPTFPRIEDPFKVLDILVQCRKSL 485
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2E5V571_9PROT (CoA_binding domain-containing protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5V571_9PROT) HSP 1 Score: 350 bits (898), Expect = 2.470e-116 Identity = 176/263 (66.92%), Postives = 213/263 (80.99%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQAL 789
DV EFLA D++T AIF YLESL RP++F++IAR VT KKPVI+LKGGAT GA AA+SHTASLG++D+ILDGALRQAG++RIDEFSHLF AAKA A MPVP GNRVGFVSPSGAFIVH+SD+C+QR L F +T++T RL+EISP FI ++NPVD+FPSATV+GME+A+RE+MEA+ D NVDAVV+I+IL KEL L FI + ++P KP+YISFSGD N AK FLEPRGVPTFP IED FK LDI+ + +L
Sbjct: 198 DVLEFLAYDRETKAIFIYLESLHRPQEFLKIARMVTRKKPVIMLKGGATEAGAKAAMSHTASLGANDKILDGALRQAGIIRIDEFSHLFTAAKAAAMMPVPTGNRVGFVSPSGAFIVHLSDICKQRTCLDFSSVTSETQLRLEEISPSFINITNPVDVFPSATVNGMEFAWRESMEALLNDDNVDAVVTILILAKELEAMDLHFIVDQKNRFPTKPIYISFSGDEVLNAAAKNFLEPRGVPTFPRIEDPFKVLDIMAQCRSSL 460
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A2E3K5Y9_9PROT (CoA_binding domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3K5Y9_9PROT) HSP 1 Score: 346 bits (888), Expect = 9.980e-115 Identity = 175/264 (66.29%), Postives = 208/264 (78.79%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
DV +LA DK+T IF YLESLRRPR FI +A+ VT K VI+LKGG T +GA AA SHTASLGSDD++LDGAL QAGVVR+DEFSHLF AAKA A MPVP G RVGFVSPSGAFIVHISD+C+QR L FP T RL+EISPPFI +SNP DIFP+ATV+GME+A+REAM A+ DP +D+VV+I+IL ELG SL+FIPELA ++P+KP+Y+S+SGD N A AFLEP GVPTFP IED FKAL+I+ A + L+
Sbjct: 205 DVLGYLADDKETKTIFLYLESLRRPRQFIRVAKKVTRVKAVIMLKGGTTKEGALAAQSHTASLGSDDKVLDGALAQAGVVRVDEFSHLFTAAKAAAMMPVPKGPRVGFVSPSGAFIVHISDICKQRTLLEFPKPAKHTQKRLEEISPPFISISNPADIFPAATVNGMEFAWREAMRALLLDPRIDSVVTILILADELGKMSLEFIPELAKEFPEKPIYVSYSGDENSNRAATAFLEPEGVPTFPRIEDPFKALNIMASARKFLR 468
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A848ZPZ0_9DELT (CoA_binding domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A848ZPZ0_9DELT) HSP 1 Score: 342 bits (876), Expect = 5.750e-113 Identity = 167/265 (63.02%), Postives = 211/265 (79.62%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
DV E+LA D +T AIF YLES +RP+ F+EIA VT KKP+ILLKGG T +GA AA++HTA+L SDDRI+DGAL+QAG+ R+ ++SHLFLAAKAIA MP+P GNRV F+ PSGA +V ++DLCR RL L PDL KT RL+EISPPFIR+ NPVDI+ SATVHG+E+ YRE MEAV KD N+D VV I++LT + G+PSLDFI ++A +YP KP+Y++FSG+ E +KAFLEPRGVPTFPLIE+ F+ L IL R +A++R
Sbjct: 199 DVLEYLAEDPETKAIFTYLESFKRPKRFMEIAHEVTRKKPIILLKGGQTEEGAQAAVAHTAALASDDRIIDGALKQAGIARVYKYSHLFLAAKAIATMPLPKGNRVSFLGPSGAMLVVLTDLCRHRLGLEVPDLEEKTRQRLQEISPPFIRMRNPVDIWASATVHGVEFGYREGMEAVLKDSNIDVVVPILMLTDDTGVPSLDFIVDMAERYPDKPIYVTFSGEKKHMEASKAFLEPRGVPTFPLIEEPFEVLSILARCRKAMER 463
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A661LMJ5_9DELT (CoA_binding domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661LMJ5_9DELT) HSP 1 Score: 340 bits (871), Expect = 3.080e-112 Identity = 167/264 (63.26%), Postives = 214/264 (81.06%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALK 792
+V E+L D++T AIF YLESL+RP F+EIAR VT KPVILLKGGAT +GA AA++HTA+L SDDRI++GAL +AG+VRI ++SH+FLAAKA+A MP+P GNRV F++PSGA +V ++DLC++ L L PDL + RL+EISPP+IR+ NPVDI+PSA +HG+EYAYREA+EAV +DPN+DAVV I++LTKE G+P LDFI ELA YP+KP+YI+FSGD + AKAFLEPRGVPTFPLIE+ F+ L IL R A++
Sbjct: 198 EVLEYLGRDQETKAIFIYLESLKRPAQFLEIARKVTRTKPVILLKGGATYEGARAAVAHTAALASDDRIINGALNKAGIVRIQKYSHMFLAAKALAVMPLPNGNRVSFMAPSGAMLVILTDLCQRDLGLRVPDLEQENRRRLQEISPPYIRMRNPVDIWPSAALHGVEYAYREAIEAVLRDPNIDAVVPILMLTKETGIPPLDFIVELAGLYPEKPIYITFSGDKRHMDAAKAFLEPRGVPTFPLIEEPFEVLSILARCKMAME 461
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Match: A0A1V1WVH8_9DELT (CoA_binding domain-containing protein n=1 Tax=Desulfobacterales bacterium S7086C20 TaxID=1869302 RepID=A0A1V1WVH8_9DELT) HSP 1 Score: 327 bits (839), Expect = 2.240e-107 Identity = 161/265 (60.75%), Postives = 211/265 (79.62%), Query Frame = 1
Query: 1 DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPDGAAAALSHTASLGSDDRILDGALRQAGVVRIDEFSHLFLAAKAIAPMPVPAGNRVGFVSPSGAFIVHISDLCRQRLNLTFPDLTAKTMDRLKEISPPFIRLSNPVDIFPSATVHGMEYAYREAMEAVFKDPNVDAVVSIMILTKELGMPSLDFIPELAAKYPKKPVYISFSGDHACNEEAKAFLEPRGVPTFPLIEDAFKALDILVRAGQALKR 795
+V E+ A D +T AIF YLES +RP+ F+EIA +T KPVILLKGG T +G+ AA++HTA+L SDDRI+DGAL++AG+ RI ++SHLFLAAKA+A MP+P GNRV F++PSGA +V ++DLC+Q L L+ PDL T +RL+EISPP+IR+ NPVDI+PSA ++G+EYAYRE MEAV KDP +DAVV I++LT E G+P LDFI EL YP+KP+Y++FSGD E +KAFLEPRGVPTFPLIE+ F+ L IL + +A++R
Sbjct: 199 EVLEYYAGDPETKAIFIYLESFKRPQRFLEIASEITRVKPVILLKGGRTAEGSRAAVAHTAALASDDRIVDGALKRAGITRIYKYSHLFLAAKALAAMPLPKGNRVSFMAPSGAMLVVLTDLCQQDLGLSVPDLEEPTRERLQEISPPYIRMRNPVDIWPSAALNGVEYAYREGMEAVLKDPMIDAVVPILMLTDETGVPPLDFIIELVRLYPEKPIYVTFSGDKKHMEASKAFLEPRGVPTFPLIEEPFEVLSILNQCRKAMER 463 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101893.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101893.1.1 >prot_L-digitata_M_contig101893.1.1 ID=prot_L-digitata_M_contig101893.1.1|Name=mRNA_L-digitata_M_contig101893.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=266bp DVFEFLATDKQTDAIFFYLESLRRPRDFIEIARTVTPKKPVILLKGGATPback to top mRNA from alignment at L-digitata_M_contig101893:1..798+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101893.1.1 ID=mRNA_L-digitata_M_contig101893.1.1|Name=mRNA_L-digitata_M_contig101893.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=798bp|location=Sequence derived from alignment at L-digitata_M_contig101893:1..798+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101893:1..798+ >mRNA_L-digitata_M_contig101893.1.1 ID=mRNA_L-digitata_M_contig101893.1.1|Name=mRNA_L-digitata_M_contig101893.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=798bp|location=Sequence derived from alignment at L-digitata_M_contig101893:1..798+ (Laminaria digitata LdigPH10_18mv male)back to top |