mRNA_L-digitata_M_contig101856.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A4Y6PZ19_9DELT (Uncharacterized protein n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PZ19_9DELT) HSP 1 Score: 308 bits (788), Expect = 1.450e-93 Identity = 182/301 (60.47%), Postives = 220/301 (73.09%), Query Frame = 1
Query: 1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDS-ADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQDAA-TATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSEIASDRYTYITP 897
P G+EATV TPA S+ GLVDVR TP DA +D +YY+ S D IA++ PASGP +GG +V ++GA LDA LSV FG S A + +D+GPGH V PA + G V VT DG A+ T + A+TYV+DLWIDR+TPDT DVAGG +VTIEGEG+TGA RV FGG+ A+ FTVDS T+ITA AP +AG+VDV +ER E+ A F DGFTYTEDLEV GF PVRGS+AGNTYVE+RGRGF G +DVTF GQ AA VQ+LD+QTLAVRTPP T V+V V+ Q AS++YTY P
Sbjct: 315 PSGAEATVVTPAGSA-GLVDVRAETPSGDATFLEDGFYYTASNTDFAIAAVDPASGPESGGVDVTLIGAGLDASGLSVTFGGSAATV-VDQGPGHATVTIPAHAPGAVDVTIADGNGASDTLSGAFTYVDDLWIDRVTPDTADVAGGVSVTIEGEGFTGAQRVLFGGI-AAQFTVDSDTQITATAPPHAAGIVDVVVER-EIEAKFVDGFTYTEDLEVFGFFPVRGSVAGNTYVEIRGRGFTGMMDVTFDGQAAASVQILDAQTLAVRTPPHAT-GPVDVVVTRGNDQVT-ASEQYTYFNP 609
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5B8XZJ4_9DELT (Uncharacterized protein n=2 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XZJ4_9DELT) HSP 1 Score: 245 bits (626), Expect = 1.290e-70 Identity = 140/267 (52.43%), Postives = 181/267 (67.79%), Query Frame = 1
Query: 7 GSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPP 807
G+ A VTTPA ++ GL D+R T DS A I +D ++Y+ + +IA + PA P GG +V I+G+ LD +LS+ F S+ ++ GPGHV V PA + G V +TAT T TD +TYVE+LWID + P+ G+ AGGY V I GEG+TGA+RV FG VQAS F +DS T+ITA APA + G VDV +ERG V A+FRD FT+TE LE+ G+ P+RGS+AGNTYVE+ GRGF I F PA VQ+LDSQTL +RTPP
Sbjct: 299 GTSADVTTPAGAA-GLADIRAET-DSGADILRDGFFYAAPGEFQIAGVDPAEAPAIGGTKVTIIGSGLDDAALSIEFD-SIPATIVESGPGHVVVEVPAHAPGVVDITATSSAGTRTLTDGFTYVENLWIDSVAPNEGEAAGGYDVVITGEGFTGATRVYFGLVQAS-FVLDSPTQITASAPAHTPGTVDVKVERGSVKASFRDAFTFTEPLEIFGYFPIRGSVAGNTYVEVLGRGFTDGITARFDQNPALAVQVLDSQTLTLRTPP 561
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A838IJS7_9DELT (IPT/TIG domain-containing protein n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IJS7_9DELT) HSP 1 Score: 218 bits (555), Expect = 1.000e-60 Identity = 135/303 (44.55%), Postives = 192/303 (63.37%), Query Frame = 1
Query: 1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQD-LYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFG---ASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSEIASDRYTYITP 897
P + ATV TPA SS GLVDVR+ +P D+ + + Y+Y+ D+ + ++ P GP +GG EV ++G+ L A L V FG A++ + T DR V+V PA ++G V V+ T A+TYV DLW+D I P++G V G V I GEG+TGA RV FG + A+ FTVD+ +ITA PA A V+VS+ERG + AT G+T+ EDL ++G+ P RGS+AGNTY+E+RGRGF G V FG + DV++LD+QTL+VR+P + +V+++V+ A G S A+ RYT+ P
Sbjct: 302 PARTVATVITPA-SSVGLVDVRIQSPIGDSALAERAFYFYNSPTDLGLGAVHPNRGPASGGIEVTLIGSGLAASGLQVRFGTNDATILEQTNDR----VKVRVPARAIGVVDVSVIRDGQTVTLPGAFTYVADLWVDTIAPNSGPVEGNDTVVISGEGFTGAERVLFGTLSAA-FTVDNDGQITATTPAHGAAQVNVSVERGGIKATLFGGYTFAEDLVLYGYFPTRGSIAGNTYIEIRGRGFSGTPQVHFGEELGLDVRVLDAQTLSVRSPKHAS-GAVDLKVTQA-GDSITAATRYTFFNP 596
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5C6XA39_9DELT (Uncharacterized protein n=1 Tax=Lujinxingia vulgaris TaxID=2600176 RepID=A0A5C6XA39_9DELT) HSP 1 Score: 207 bits (526), Expect = 9.620e-57 Identity = 129/301 (42.86%), Postives = 177/301 (58.80%), Query Frame = 1
Query: 1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSV-TATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSE-IASDRYTYITP 897
P G+ AT+ TPA +PG VDVR+ A + YY SD+ ++ PASG GG+EVLI G LDA L + FG A L +++ VRVL P G+ G V + + GQ T DA+TY L +D +TP +GDVAGGY +T+ GEG+TG + V G + +FTV+ T +T + G + + R + AT D FT+TE LE+ GF P RG++AGNTYV +RG+GF + ++TFGG PA DV L+D+ TLA+RTPP T EVEV G E +A + ++Y P
Sbjct: 313 PDGTSATLRTPA-GAPGPVDVRVELEGDGAFLADAFYYLSDTTTFSADALRPASGSSLGGDEVLIFGGGLDAAGLEITFGGQPATL-VEQSTNMVRVLTPPGAPGVVDLGLSASGQPDLTLADAFTYGAPLILDALTPASGDVAGGYPLTLNGEGFTGTTEVRLGDLP-QTFTVEDDTTLTITVGPGAPGPASLEVIRPDARATLADAFTFTEALELWGFEPTRGAVAGNTYVMVRGQGFTPETELTFGGAPATDVALIDANTLALRTPPGSTG---EVEVRATQGAQEAVAPEPFSYFNP 607
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5C6X345_9DELT (Uncharacterized protein n=3 Tax=Lujinxingia vulgaris TaxID=2600176 RepID=A0A5C6X345_9DELT) HSP 1 Score: 206 bits (523), Expect = 2.460e-56 Identity = 131/301 (43.52%), Postives = 179/301 (59.47%), Query Frame = 1
Query: 1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSV-TATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATG-QSEIASDRYTYITP 897
P G AT+ TPA +S G VDVR+ A + YY SD++ ++ P SG GG+EVLI G LDA +L V F A + +++G +RVL+P G+ G V + + DGQ T DA+TY L +D +TP +GDVAGGY VT+ GEG+TG + V GG+ A +FTV+S T IT + G + + R + AT D FT+TE LE+ GF P RG++AGNTYV +RG+GF D ++FGG PA D+ +D+ TLA+RTPP T EVEV G Q A + ++Y P
Sbjct: 313 PDGRSATLRTPAGAS-GPVDVRVELEGDGAYLSDAFYYLSDTSTFSADALRPNSGSSLGGDEVLIFGGGLDAANLEVTFDGQPATI-LEQGANLIRVLSPPGAPGVVDLGLSADGQPDLTLPDAFTYGAPLTLDALTPASGDVAGGYPVTLTGEGFTGTTEVRLGGL-AQTFTVESDTTITIEVGPGAPGPASLEVIRSDARATLEDAFTFTEALELWGFEPTRGAVAGNTYVIVRGQGFTPDTTLSFGGAPATDITRIDANTLALRTPPGSTG---EVEVRAEDGAQQATAPEPFSYFNP 607
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5C6V0D2_9DELT (Uncharacterized protein n=3 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6V0D2_9DELT) HSP 1 Score: 200 bits (509), Expect = 1.970e-54 Identity = 124/299 (41.47%), Postives = 175/299 (58.53%), Query Frame = 1
Query: 7 GSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVT-ATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSE-IASDRYTYITP 897
GS AT+ TP +PG VD+R+ A + YY S + + ++ P SG GG+EVLI G LDA L V+FG VA L +++ VRVL P G+ G V ++ + DGQ DA+TY L +D +TP +GD+AGGY +T+ G G TG + V GG+ +FTV+ T +T + G + + R + AT D FT+TEDL + GF P RG++AGNTY+ +RG+GF D ++TFGG PA D+ +D+ TLA+RTPP T EVEV G E +A + ++Y P
Sbjct: 315 GSSATLRTPG-GAPGSVDLRVELEGDGAYLADAFYYLSSESTFGVDALRPDSGSSLGGDEVLIFGGGLDATGLQVSFGGEVATL-VEQSANLVRVLTPPGAPGVVDLSLSADGQPDLVLPDAFTYGAPLSLDALTPASGDIAGGYPLTLTGAGLTGTTEVRLGGLS-QNFTVNDDTSLTIHTGPGAPGPASLELIRADARATLDDAFTFTEDLAIWGFEPTRGAVAGNTYIIVRGQGFAPDTELTFGGAPATDITPIDANTLALRTPPGSTG---EVEVRATQGAQEAVAPEPFSYFNP 607
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A4Y6PXE8_9DELT (Uncharacterized protein n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PXE8_9DELT) HSP 1 Score: 191 bits (486), Expect = 2.520e-51 Identity = 129/302 (42.72%), Postives = 168/302 (55.63%), Query Frame = 1
Query: 1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQ-DAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSEI-ASDRYTYITPA 900
P S AT+ TPA S+ GLVDV D+ I +D Y Y +A+++P GP +GG EVL+ G D + FG +VA + +DRG RV PAG++G V V D + A+ Y + LW+D + P G GG +VT+ G G+ G RV FGG+ A+ FTV S + I A PA AG VDV +ER V A RDGF YTE LE+ GF+P+RGS+AGNTYVE+RGRG G + V F + A VQ +D L + TPP Q E +VS G + A Y Y PA
Sbjct: 302 PQASTATLLTPAGSA-GLVDVSAENS-RDSTIFEDGYLYRADDAATLAALSPGFGPASGGTEVLLRGNGFDGAGVEFVFGTNVATV-VDRGATWARVQTPAGAVGTVDVVMRDANGEIDRLASAFEYRQALWVDAVAPQQGPADGGTSVTLTGTGFAGTDRVEFGGI-AAPFTVVSDSEIEATTPAHGAGSVDVVVERDGVEARLRDGFLYTEQLEIWGFTPIRGSIAGNTYVEVRGRGLYGALRVFFDSEEAPVVQRIDRNNLLLYTPPH---QVGEAQVSVEAGSQQADAPYPYEYFNPA 596
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A2Z4FH00_9DELT (Uncharacterized protein n=1 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FH00_9DELT) HSP 1 Score: 189 bits (481), Expect = 1.220e-50 Identity = 120/265 (45.28%), Postives = 167/265 (63.02%), Query Frame = 1
Query: 16 ATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATD-GQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPP 807
ATV TPA ++ GLV V T + +A I + Y Y+ +A +IA+I P+ GP +GG +V I+G L+ ++ FGA+ A + + R RV PA G V VT + G + TDA+ Y + L I ++P G VAGG +VTI G G+TGA RV FGG+ A+ FTVDS T+ITA +PA AG+VDV + RG V++ D F YT+ LE+ GF+P+RG++AGNTYVE+RG+GF G++ F A DVQ +D L + TPP
Sbjct: 309 ATVRTPAHAA-GLVSVSAQTSNDNA-ISTNAYLYTANATAQIAAIRPSVGPTSGGTDVEIIGVGLNGAGVAFDFGANQATV-IARDDSWARVRTPAAPAGRVDVTMRNAGGEIGRLTDAFEYQQALEIASLSPSEGPVAGGTSVTILGSGFTGAERVEFGGI-AAPFTVDSDTQITAQSPAHGAGLVDVRVSRGGVASVAEDAFNYTQALEIWGFTPIRGAIAGNTYVEVRGQGFYGELRAYFDDIEATDVQRVDRNNLRLYTPP 569
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5B8XU89_9DELT (Uncharacterized protein n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XU89_9DELT) HSP 1 Score: 187 bits (476), Expect = 5.530e-50 Identity = 121/287 (42.16%), Postives = 162/287 (56.45%), Query Frame = 1
Query: 49 GLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAG-SLGPVSVTATDGQDAA-TATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPP-VMTPQSVEVEVSNATGQSEIASDRYTYITPA 900
GL D+ L+T DSDA + +D +YY IA+I+PASGPI+GGN+ +LG + V ++ ++R + PAG SLG V VT + T + YTY+ DL I TP++G V GG + I+GEG +G +RVT GG+ A F V S T + ++P AG D+ + E+ A DGF YTE LE+ GFSP RGS+AGNT V +RGRGF G I VT GG P A ++ LD L R PP + P ++EV + AT Q YTY PA
Sbjct: 311 GLADITLLT-DSDAAVARDAFYYRPDDSPTIAAISPASGPISGGNQAQVLGWGFLGRDIYVDGNPAI---YLNRTDAWALIELPAGTSLGQVDVTLLESASVLDTLPNGYTYLADLEISTSTPESGPVEGGTEIVIQGEGLSGVTRVTIGGISAE-FQVISDTELRVVSPPGRAGPADIKVSASELEAELVDGFEYTETLEIWGFSPTRGSVAGNTLVNVRGRGFSGQIVVTLGGNPGAQIRRLDRNNLTFRAPPGPVGPANLEVGANGATAQGPYT---YTYFNPA 589
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A838IMS1_9DELT (IPT/TIG domain-containing protein n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IMS1_9DELT) HSP 1 Score: 166 bits (419), Expect = 2.450e-42 Identity = 110/281 (39.15%), Postives = 155/281 (55.16%), Query Frame = 1
Query: 4 GGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDG-QDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVS 843
G V TPA S+ GL V + +D D Y+Y + + + ++ P GP GG EV ++G D +L + FGA++A + ++ GP H V APAGS+G V V G + + + Y + ID +TP TG G +VTI+G G++GA RV FG + A F + S T I A PA AG+VDV + + A +D + +T+ LEV GFSPVRG++AG TYV LRG GF G + V GG+ A +V+ LD L TP P V VE++
Sbjct: 328 GAGSIRVLTPAASA-GLSAVSVKNA-TDNFRLDDAYFYRANGALRLGALHPNFGPTTGGTEVWLVGYGFDVANLRIRFGATLATV-INAGPDHALVRAPAGSVGSVDVVMLSGTNELDRVVNGFDYRAAITIDSLTPTTGSATGNQSVTIKGSGFSGAERVYFGTLSAG-FQIISPTEIRATTPAHGAGLVDVVVSANGIEARRKDAYRFTDSLEVWGFSPVRGAIAGGTYVALRGTGFSGLLSVDLGGKAATEVRRLDDNNLYFMTP-AQGPGEVTVELT 603 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101856.1.1 >prot_L-digitata_M_contig101856.1.1 ID=prot_L-digitata_M_contig101856.1.1|Name=mRNA_L-digitata_M_contig101856.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASIback to top mRNA from alignment at L-digitata_M_contig101856:3..919+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101856.1.1 ID=mRNA_L-digitata_M_contig101856.1.1|Name=mRNA_L-digitata_M_contig101856.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=917bp|location=Sequence derived from alignment at L-digitata_M_contig101856:3..919+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101856:3..919+ >mRNA_L-digitata_M_contig101856.1.1 ID=mRNA_L-digitata_M_contig101856.1.1|Name=mRNA_L-digitata_M_contig101856.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig101856:3..919+ (Laminaria digitata LdigPH10_18mv male)back to top |