mRNA_L-digitata_M_contig101856.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101856.1.1
Unique NamemRNA_L-digitata_M_contig101856.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A4Y6PZ19_9DELT (Uncharacterized protein n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PZ19_9DELT)

HSP 1 Score: 308 bits (788), Expect = 1.450e-93
Identity = 182/301 (60.47%), Postives = 220/301 (73.09%), Query Frame = 1
Query:    1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDS-ADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQDAA-TATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSEIASDRYTYITP 897
            P G+EATV TPA S+ GLVDVR  TP  DA   +D +YY+ S  D  IA++ PASGP +GG +V ++GA LDA  LSV FG S A + +D+GPGH  V  PA + G V VT  DG  A+ T + A+TYV+DLWIDR+TPDT DVAGG +VTIEGEG+TGA RV FGG+ A+ FTVDS T+ITA AP  +AG+VDV +ER E+ A F DGFTYTEDLEV GF PVRGS+AGNTYVE+RGRGF G +DVTF GQ AA VQ+LD+QTLAVRTPP  T   V+V V+    Q   AS++YTY  P
Sbjct:  315 PSGAEATVVTPAGSA-GLVDVRAETPSGDATFLEDGFYYTASNTDFAIAAVDPASGPESGGVDVTLIGAGLDASGLSVTFGGSAATV-VDQGPGHATVTIPAHAPGAVDVTIADGNGASDTLSGAFTYVDDLWIDRVTPDTADVAGGVSVTIEGEGFTGAQRVLFGGI-AAQFTVDSDTQITATAPPHAAGIVDVVVER-EIEAKFVDGFTYTEDLEVFGFFPVRGSVAGNTYVEIRGRGFTGMMDVTFDGQAAASVQILDAQTLAVRTPPHAT-GPVDVVVTRGNDQVT-ASEQYTYFNP 609          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5B8XZJ4_9DELT (Uncharacterized protein n=2 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XZJ4_9DELT)

HSP 1 Score: 245 bits (626), Expect = 1.290e-70
Identity = 140/267 (52.43%), Postives = 181/267 (67.79%), Query Frame = 1
Query:    7 GSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPP 807
            G+ A VTTPA ++ GL D+R  T DS A I +D ++Y+   + +IA + PA  P  GG +V I+G+ LD  +LS+ F  S+    ++ GPGHV V  PA + G V +TAT      T TD +TYVE+LWID + P+ G+ AGGY V I GEG+TGA+RV FG VQAS F +DS T+ITA APA + G VDV +ERG V A+FRD FT+TE LE+ G+ P+RGS+AGNTYVE+ GRGF   I   F   PA  VQ+LDSQTL +RTPP
Sbjct:  299 GTSADVTTPAGAA-GLADIRAET-DSGADILRDGFFYAAPGEFQIAGVDPAEAPAIGGTKVTIIGSGLDDAALSIEFD-SIPATIVESGPGHVVVEVPAHAPGVVDITATSSAGTRTLTDGFTYVENLWIDSVAPNEGEAAGGYDVVITGEGFTGATRVYFGLVQAS-FVLDSPTQITASAPAHTPGTVDVKVERGSVKASFRDAFTFTEPLEIFGYFPIRGSVAGNTYVEVLGRGFTDGITARFDQNPALAVQVLDSQTLTLRTPP 561          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A838IJS7_9DELT (IPT/TIG domain-containing protein n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IJS7_9DELT)

HSP 1 Score: 218 bits (555), Expect = 1.000e-60
Identity = 135/303 (44.55%), Postives = 192/303 (63.37%), Query Frame = 1
Query:    1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQD-LYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFG---ASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSEIASDRYTYITP 897
            P  + ATV TPA SS GLVDVR+ +P  D+ + +   Y+Y+   D+ + ++ P  GP +GG EV ++G+ L A  L V FG   A++ + T DR    V+V  PA ++G V V+        T   A+TYV DLW+D I P++G V G   V I GEG+TGA RV FG + A+ FTVD+  +ITA  PA  A  V+VS+ERG + AT   G+T+ EDL ++G+ P RGS+AGNTY+E+RGRGF G   V FG +   DV++LD+QTL+VR+P   +  +V+++V+ A G S  A+ RYT+  P
Sbjct:  302 PARTVATVITPA-SSVGLVDVRIQSPIGDSALAERAFYFYNSPTDLGLGAVHPNRGPASGGIEVTLIGSGLAASGLQVRFGTNDATILEQTNDR----VKVRVPARAIGVVDVSVIRDGQTVTLPGAFTYVADLWVDTIAPNSGPVEGNDTVVISGEGFTGAERVLFGTLSAA-FTVDNDGQITATTPAHGAAQVNVSVERGGIKATLFGGYTFAEDLVLYGYFPTRGSIAGNTYIEIRGRGFSGTPQVHFGEELGLDVRVLDAQTLSVRSPKHAS-GAVDLKVTQA-GDSITAATRYTFFNP 596          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5C6XA39_9DELT (Uncharacterized protein n=1 Tax=Lujinxingia vulgaris TaxID=2600176 RepID=A0A5C6XA39_9DELT)

HSP 1 Score: 207 bits (526), Expect = 9.620e-57
Identity = 129/301 (42.86%), Postives = 177/301 (58.80%), Query Frame = 1
Query:    1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSV-TATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSE-IASDRYTYITP 897
            P G+ AT+ TPA  +PG VDVR+      A +    YY SD+      ++ PASG   GG+EVLI G  LDA  L + FG   A L +++    VRVL P G+ G V +  +  GQ   T  DA+TY   L +D +TP +GDVAGGY +T+ GEG+TG + V  G +   +FTV+  T +T      + G   + + R +  AT  D FT+TE LE+ GF P RG++AGNTYV +RG+GF  + ++TFGG PA DV L+D+ TLA+RTPP  T    EVEV    G  E +A + ++Y  P
Sbjct:  313 PDGTSATLRTPA-GAPGPVDVRVELEGDGAFLADAFYYLSDTTTFSADALRPASGSSLGGDEVLIFGGGLDAAGLEITFGGQPATL-VEQSTNMVRVLTPPGAPGVVDLGLSASGQPDLTLADAFTYGAPLILDALTPASGDVAGGYPLTLNGEGFTGTTEVRLGDLP-QTFTVEDDTTLTITVGPGAPGPASLEVIRPDARATLADAFTFTEALELWGFEPTRGAVAGNTYVMVRGQGFTPETELTFGGAPATDVALIDANTLALRTPPGSTG---EVEVRATQGAQEAVAPEPFSYFNP 607          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5C6X345_9DELT (Uncharacterized protein n=3 Tax=Lujinxingia vulgaris TaxID=2600176 RepID=A0A5C6X345_9DELT)

HSP 1 Score: 206 bits (523), Expect = 2.460e-56
Identity = 131/301 (43.52%), Postives = 179/301 (59.47%), Query Frame = 1
Query:    1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSV-TATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATG-QSEIASDRYTYITP 897
            P G  AT+ TPA +S G VDVR+      A +    YY SD++     ++ P SG   GG+EVLI G  LDA +L V F    A + +++G   +RVL+P G+ G V +  + DGQ   T  DA+TY   L +D +TP +GDVAGGY VT+ GEG+TG + V  GG+ A +FTV+S T IT      + G   + + R +  AT  D FT+TE LE+ GF P RG++AGNTYV +RG+GF  D  ++FGG PA D+  +D+ TLA+RTPP  T    EVEV    G Q   A + ++Y  P
Sbjct:  313 PDGRSATLRTPAGAS-GPVDVRVELEGDGAYLSDAFYYLSDTSTFSADALRPNSGSSLGGDEVLIFGGGLDAANLEVTFDGQPATI-LEQGANLIRVLSPPGAPGVVDLGLSADGQPDLTLPDAFTYGAPLTLDALTPASGDVAGGYPVTLTGEGFTGTTEVRLGGL-AQTFTVESDTTITIEVGPGAPGPASLEVIRSDARATLEDAFTFTEALELWGFEPTRGAVAGNTYVIVRGQGFTPDTTLSFGGAPATDITRIDANTLALRTPPGSTG---EVEVRAEDGAQQATAPEPFSYFNP 607          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5C6V0D2_9DELT (Uncharacterized protein n=3 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6V0D2_9DELT)

HSP 1 Score: 200 bits (509), Expect = 1.970e-54
Identity = 124/299 (41.47%), Postives = 175/299 (58.53%), Query Frame = 1
Query:    7 GSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVT-ATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSE-IASDRYTYITP 897
            GS AT+ TP   +PG VD+R+      A +    YY S  +   + ++ P SG   GG+EVLI G  LDA  L V+FG  VA L +++    VRVL P G+ G V ++ + DGQ      DA+TY   L +D +TP +GD+AGGY +T+ G G TG + V  GG+   +FTV+  T +T      + G   + + R +  AT  D FT+TEDL + GF P RG++AGNTY+ +RG+GF  D ++TFGG PA D+  +D+ TLA+RTPP  T    EVEV    G  E +A + ++Y  P
Sbjct:  315 GSSATLRTPG-GAPGSVDLRVELEGDGAYLADAFYYLSSESTFGVDALRPDSGSSLGGDEVLIFGGGLDATGLQVSFGGEVATL-VEQSANLVRVLTPPGAPGVVDLSLSADGQPDLVLPDAFTYGAPLSLDALTPASGDIAGGYPLTLTGAGLTGTTEVRLGGLS-QNFTVNDDTSLTIHTGPGAPGPASLELIRADARATLDDAFTFTEDLAIWGFEPTRGAVAGNTYIIVRGQGFAPDTELTFGGAPATDITPIDANTLALRTPPGSTG---EVEVRATQGAQEAVAPEPFSYFNP 607          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A4Y6PXE8_9DELT (Uncharacterized protein n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PXE8_9DELT)

HSP 1 Score: 191 bits (486), Expect = 2.520e-51
Identity = 129/302 (42.72%), Postives = 168/302 (55.63%), Query Frame = 1
Query:    1 PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDGQ-DAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSEI-ASDRYTYITPA 900
            P  S AT+ TPA S+ GLVDV       D+ I +D Y Y       +A+++P  GP +GG EVL+ G   D   +   FG +VA + +DRG    RV  PAG++G V V   D   +      A+ Y + LW+D + P  G   GG +VT+ G G+ G  RV FGG+ A+ FTV S + I A  PA  AG VDV +ER  V A  RDGF YTE LE+ GF+P+RGS+AGNTYVE+RGRG  G + V F  + A  VQ +D   L + TPP    Q  E +VS   G  +  A   Y Y  PA
Sbjct:  302 PQASTATLLTPAGSA-GLVDVSAENS-RDSTIFEDGYLYRADDAATLAALSPGFGPASGGTEVLLRGNGFDGAGVEFVFGTNVATV-VDRGATWARVQTPAGAVGTVDVVMRDANGEIDRLASAFEYRQALWVDAVAPQQGPADGGTSVTLTGTGFAGTDRVEFGGI-AAPFTVVSDSEIEATTPAHGAGSVDVVVERDGVEARLRDGFLYTEQLEIWGFTPIRGSIAGNTYVEVRGRGLYGALRVFFDSEEAPVVQRIDRNNLLLYTPPH---QVGEAQVSVEAGSQQADAPYPYEYFNPA 596          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A2Z4FH00_9DELT (Uncharacterized protein n=1 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FH00_9DELT)

HSP 1 Score: 189 bits (481), Expect = 1.220e-50
Identity = 120/265 (45.28%), Postives = 167/265 (63.02%), Query Frame = 1
Query:   16 ATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATD-GQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPP 807
            ATV TPA ++ GLV V   T + +A I  + Y Y+ +A  +IA+I P+ GP +GG +V I+G  L+   ++  FGA+ A + + R     RV  PA   G V VT  + G +    TDA+ Y + L I  ++P  G VAGG +VTI G G+TGA RV FGG+ A+ FTVDS T+ITA +PA  AG+VDV + RG V++   D F YT+ LE+ GF+P+RG++AGNTYVE+RG+GF G++   F    A DVQ +D   L + TPP
Sbjct:  309 ATVRTPAHAA-GLVSVSAQTSNDNA-ISTNAYLYTANATAQIAAIRPSVGPTSGGTDVEIIGVGLNGAGVAFDFGANQATV-IARDDSWARVRTPAAPAGRVDVTMRNAGGEIGRLTDAFEYQQALEIASLSPSEGPVAGGTSVTILGSGFTGAERVEFGGI-AAPFTVDSDTQITAQSPAHGAGLVDVRVSRGGVASVAEDAFNYTQALEIWGFTPIRGAIAGNTYVEVRGQGFYGELRAYFDDIEATDVQRVDRNNLRLYTPP 569          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A5B8XU89_9DELT (Uncharacterized protein n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XU89_9DELT)

HSP 1 Score: 187 bits (476), Expect = 5.530e-50
Identity = 121/287 (42.16%), Postives = 162/287 (56.45%), Query Frame = 1
Query:   49 GLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAG-SLGPVSVTATDGQDAA-TATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPP-VMTPQSVEVEVSNATGQSEIASDRYTYITPA 900
            GL D+ L+T DSDA + +D +YY       IA+I+PASGPI+GGN+  +LG       + V    ++    ++R      +  PAG SLG V VT  +      T  + YTY+ DL I   TP++G V GG  + I+GEG +G +RVT GG+ A  F V S T +  ++P   AG  D+ +   E+ A   DGF YTE LE+ GFSP RGS+AGNT V +RGRGF G I VT GG P A ++ LD   L  R PP  + P ++EV  + AT Q       YTY  PA
Sbjct:  311 GLADITLLT-DSDAAVARDAFYYRPDDSPTIAAISPASGPISGGNQAQVLGWGFLGRDIYVDGNPAI---YLNRTDAWALIELPAGTSLGQVDVTLLESASVLDTLPNGYTYLADLEISTSTPESGPVEGGTEIVIQGEGLSGVTRVTIGGISAE-FQVISDTELRVVSPPGRAGPADIKVSASELEAELVDGFEYTETLEIWGFSPTRGSVAGNTLVNVRGRGFSGQIVVTLGGNPGAQIRRLDRNNLTFRAPPGPVGPANLEVGANGATAQGPYT---YTYFNPA 589          
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Match: A0A838IMS1_9DELT (IPT/TIG domain-containing protein n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IMS1_9DELT)

HSP 1 Score: 166 bits (419), Expect = 2.450e-42
Identity = 110/281 (39.15%), Postives = 155/281 (55.16%), Query Frame = 1
Query:    4 GGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASITPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAPAGSLGPVSVTATDG-QDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTIEGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEVSATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQPAADVQLLDSQTLAVRTPPVMTPQSVEVEVS 843
            G     V TPA S+ GL  V +    +D     D Y+Y  +  + + ++ P  GP  GG EV ++G   D  +L + FGA++A + ++ GP H  V APAGS+G V V    G  +     + + Y   + ID +TP TG   G  +VTI+G G++GA RV FG + A  F + S T I A  PA  AG+VDV +    + A  +D + +T+ LEV GFSPVRG++AG TYV LRG GF G + V  GG+ A +V+ LD   L   TP    P  V VE++
Sbjct:  328 GAGSIRVLTPAASA-GLSAVSVKNA-TDNFRLDDAYFYRANGALRLGALHPNFGPTTGGTEVWLVGYGFDVANLRIRFGATLATV-INAGPDHALVRAPAGSVGSVDVVMLSGTNELDRVVNGFDYRAAITIDSLTPTTGSATGNQSVTIKGSGFSGAERVYFGTLSAG-FQIISPTEIRATTPAHGAGLVDVVVSANGIEARRKDAYRFTDSLEVWGFSPVRGAIAGGTYVALRGTGFSGLLSVDLGGKAATEVRRLDDNNLYFMTP-AQGPGEVTVELT 603          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101856.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y6PZ19_9DELT1.450e-9360.47Uncharacterized protein n=1 Tax=Persicimonas caeni... [more]
A0A5B8XZJ4_9DELT1.290e-7052.43Uncharacterized protein n=2 Tax=Bradymonadales bac... [more]
A0A838IJS7_9DELT1.000e-6044.55IPT/TIG domain-containing protein n=1 Tax=Bradymon... [more]
A0A5C6XA39_9DELT9.620e-5742.86Uncharacterized protein n=1 Tax=Lujinxingia vulgar... [more]
A0A5C6X345_9DELT2.460e-5643.52Uncharacterized protein n=3 Tax=Lujinxingia vulgar... [more]
A0A5C6V0D2_9DELT1.970e-5441.47Uncharacterized protein n=3 Tax=Bradymonadales Tax... [more]
A0A4Y6PXE8_9DELT2.520e-5142.72Uncharacterized protein n=1 Tax=Persicimonas caeni... [more]
A0A2Z4FH00_9DELT1.220e-5045.28Uncharacterized protein n=1 Tax=Bradymonas sedimin... [more]
A0A5B8XU89_9DELT5.530e-5042.16Uncharacterized protein n=1 Tax=Bradymonadales bac... [more]
A0A838IMS1_9DELT2.450e-4239.15IPT/TIG domain-containing protein n=1 Tax=Bradymon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101856contigL-digitata_M_contig101856:3..919 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1306174.JODP01000001_gene4982
PFAMsTIG
Model size917
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.92e-41
EggNOG OGsCOG3468@1|root,COG4257@1|root,COG4733@1|root,COG4870@1|root,COG3468@2|Bacteria,COG4257@2|Bacteria,COG4733@2|Bacteria,COG4870@2|Bacteria,2HCJX@201174|Actinobacteria
Descriptionig-like, plexins, transcription factors
Cds size915
COG categoryMU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406623.8322372-CDS-L-digitata_M_contig101856:2..9171682406623.8322372-CDS-L-digitata_M_contig101856:2..917Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101856 3..917 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101856.1.1prot_L-digitata_M_contig101856.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101856 3..917 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101856.1.1

>prot_L-digitata_M_contig101856.1.1 ID=prot_L-digitata_M_contig101856.1.1|Name=mRNA_L-digitata_M_contig101856.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp
PGGSEATVTTPATSSPGLVDVRLVTPDSDAVIGQDLYYYSDSADIEIASI
TPASGPIAGGNEVLILGANLDAPSLSVAFGASVAQLTMDRGPGHVRVLAP
AGSLGPVSVTATDGQDAATATDAYTYVEDLWIDRITPDTGDVAGGYAVTI
EGEGYTGASRVTFGGVQASSFTVDSATRITAIAPARSAGVVDVSIERGEV
SATFRDGFTYTEDLEVHGFSPVRGSLAGNTYVELRGRGFVGDIDVTFGGQ
PAADVQLLDSQTLAVRTPPVMTPQSVEVEVSNATGQSEIASDRYTYITPA
RALAA
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mRNA from alignment at L-digitata_M_contig101856:3..919+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101856.1.1 ID=mRNA_L-digitata_M_contig101856.1.1|Name=mRNA_L-digitata_M_contig101856.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=917bp|location=Sequence derived from alignment at L-digitata_M_contig101856:3..919+ (Laminaria digitata LdigPH10_18mv male)
CCAGGTGGCTCGGAGGCCACCGTGACCACGCCCGCGACCTCCTCACCAGG GCTTGTCGACGTGCGCCTCGTCACCCCGGACTCGGACGCCGTCATCGGGC AAGACCTCTACTACTACAGCGACAGCGCGGACATCGAGATCGCCTCCATC ACGCCCGCCTCCGGCCCCATCGCGGGCGGGAACGAGGTCTTGATCCTGGG CGCGAACCTCGACGCCCCCTCGCTCTCCGTCGCCTTTGGCGCATCGGTCG CGCAGTTGACCATGGACAGAGGCCCTGGCCATGTCCGCGTCCTCGCGCCC GCTGGCTCGCTCGGCCCCGTCTCTGTCACCGCGACCGATGGCCAGGACGC GGCGACCGCGACCGACGCATACACCTACGTCGAGGACCTCTGGATCGATC GCATCACGCCTGACACGGGCGACGTGGCGGGAGGCTACGCGGTCACCATC GAGGGCGAGGGCTACACGGGCGCATCGCGCGTAACCTTTGGCGGCGTGCA AGCGAGCTCCTTCACCGTCGACAGCGCCACGCGAATCACCGCGATCGCGC CGGCGCGATCGGCGGGCGTGGTCGATGTCTCCATCGAGCGCGGCGAGGTC AGCGCGACCTTCCGCGATGGCTTCACGTATACTGAAGACCTCGAGGTGCA TGGGTTCTCTCCTGTGCGAGGATCGCTCGCGGGGAACACCTACGTGGAGC TCCGCGGGCGAGGGTTCGTGGGGGATATCGACGTGACCTTTGGCGGGCAA CCTGCCGCCGATGTGCAGCTCCTCGACAGCCAGACGCTCGCCGTGCGCAC GCCCCCCGTGATGACGCCGCAGTCCGTCGAGGTCGAGGTCTCCAACGCCA CGGGGCAGTCCGAGATCGCGAGCGATCGCTACACCTACATAACCCCGGCG CGCGCTTTGGCGGCGCC
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Coding sequence (CDS) from alignment at L-digitata_M_contig101856:3..919+

>mRNA_L-digitata_M_contig101856.1.1 ID=mRNA_L-digitata_M_contig101856.1.1|Name=mRNA_L-digitata_M_contig101856.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig101856:3..919+ (Laminaria digitata LdigPH10_18mv male)
CCAGGTGGCTCGGAGGCCACCGTGACCACGCCCGCGACCTCCTCACCAGG
GCTTGTCGACGTGCGCCTCGTCACCCCGGACTCGGACGCCGTCATCGGGC
AAGACCTCTACTACTACAGCGACAGCGCGGACATCGAGATCGCCTCCATC
ACGCCCGCCTCCGGCCCCATCGCGGGCGGGAACGAGGTCTTGATCCTGGG
CGCGAACCTCGACGCCCCCTCGCTCTCCGTCGCCTTTGGCGCATCGGTCG
CGCAGTTGACCATGGACAGAGGCCCTGGCCATGTCCGCGTCCTCGCGCCC
GCTGGCTCGCTCGGCCCCGTCTCTGTCACCGCGACCGATGGCCAGGACGC
GGCGACCGCGACCGACGCATACACCTACGTCGAGGACCTCTGGATCGATC
GCATCACGCCTGACACGGGCGACGTGGCGGGAGGCTACGCGGTCACCATC
GAGGGCGAGGGCTACACGGGCGCATCGCGCGTAACCTTTGGCGGCGTGCA
AGCGAGCTCCTTCACCGTCGACAGCGCCACGCGAATCACCGCGATCGCGC
CGGCGCGATCGGCGGGCGTGGTCGATGTCTCCATCGAGCGCGGCGAGGTC
AGCGCGACCTTCCGCGATGGCTTCACGTATACTGAAGACCTCGAGGTGCA
TGGGTTCTCTCCTGTGCGAGGATCGCTCGCGGGGAACACCTACGTGGAGC
TCCGCGGGCGAGGGTTCGTGGGGGATATCGACGTGACCTTTGGCGGGCAA
CCTGCCGCCGATGTGCAGCTCCTCGACAGCCAGACGCTCGCCGTGCGCAC
GCCCCCCGTGATGACGCCGCAGTCCGTCGAGGTCGAGGTCTCCAACGCCA
CGGGGCAGTCCGAGATCGCGAGCGATCGCTACACCTACATAACCCCGGCG
CGCGCTTTGGCGGCG
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