mRNA_L-digitata_M_contig10185.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig10185.1.1
Unique NamemRNA_L-digitata_M_contig10185.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: D8LMR3_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR3_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 5.420e-143
Identity = 221/270 (81.85%), Postives = 236/270 (87.41%), Query Frame = 2
Query:    8 LEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
            L  KV+LVTGSTDGIGKHTASRLAEEGATV+VHGRRE+AVREAVE V G   G+ KVEGIVAD+SSLRG + LCDEVL  TDRLDCLLNNAGVFEADF HS+DG EYTFAVNVLAPYVITGRLLDL+AKAPGGGRVVNVASLSASYS+DFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAP+G+TCNSLDPGTV+TKMLRAGWGM GIP+KSANDQFYLATSD V+ SSG Y         XXX    EACRRLW VLEELS  +Y
Sbjct:   48 LADKVYLVTGSTDGIGKHTASRLAEEGATVLVHGRRESAVREAVEHVGG---GKGKVEGIVADLSSLRGANHLCDEVLRLTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKGITCNSLDPGTVNTKMLRAGWGMGGIPVKSANDQFYLATSDDVTDSSGEYXXXXXXXXXXXXXXXXEACRRLWRVLEELSGFSY 314          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A6V2U0S1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2U0S1_HETAK)

HSP 1 Score: 272 bits (695), Expect = 5.060e-83
Identity = 141/269 (52.42%), Postives = 185/269 (68.77%), Query Frame = 2
Query:   17 KVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEGV--TCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
            K+F+VTGSTDGIG+HT+ +LAE GA VIVHGR  A   E V++++   +G  K++  VAD+S    +H L D++  +   +DCL+NNAGVFE  F  + DG E TFAVNV AP+V+T RLL ++ K PG  R++ V+S+S    +DF+NLQFEKGGY +H+SYSLSKL D M   E+A R   G   T N+LDPGTV+TKML AGWGM GIP+  AN++F+LATS  V G +G+Y+ S R       A D EA RRLWE LE  + +TY
Sbjct:   61 KIFVVTGSTDGIGRHTSKKLAETGARVIVHGRNTARCEETVQWIKDI-TGNEKIDYFVADLSETSNVHTLADQICEKYSHIDCLINNAGVFEEQFQTTPDGFEMTFAVNVAAPFVLTKRLLPMLQKRPGS-RLIIVSSISQGSRIDFENLQFEKGGYDEHSSYSLSKLCDAMLAFEMAARFGSGAQPTVNTLDPGTVNTKMLLAGWGMCGIPVTRANNEFWLATSPDVEGVNGKYFTSCRESRASQVAYDPEARRRLWEYLERTTGVTY 327          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A7S2V5E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5E2_9STRA)

HSP 1 Score: 259 bits (662), Expect = 9.710e-78
Identity = 144/278 (51.80%), Postives = 192/278 (69.06%), Query Frame = 2
Query:   14 GKVFLVTGSTDGIGKHTASRLAEEGA----TVIVHGRREAAVREAVEFVE----GCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARR--APEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
            GKV+LVTGSTDGIG+HT  RLA   A    TV+VHGR  A    AV++V         G  +VE IVADIS++RG+  L ++  AR  RLDCL+NNAGVFE  +  +ED  E TFAVNV+APY++T  LLDL+    G  R++NV+S+S  Y V+FDNLQF+ GGYSDHA+YSLSKLL +M++ E A R  +P+ +T NSLDPGTV+TKML AGWG  GI +  A+++F+LATSD V G +GRY+V +   +    A D     +L+E+LE ++ ++Y
Sbjct:   81 GKVYLVTGSTDGIGRHTCGRLAALAADGDSTVVVHGRDPARCALAVDWVREKSLSAGGGGCRVESIVADISTIRGVASLANQFKARFGRLDCLINNAGVFEQSYQLTEDNLEMTFAVNVMAPYLLTFLLLDLMLPHKGS-RIINVSSISQGYDVNFDNLQFQNGGYSDHAAYSLSKLLMVMYSLESAERIGSPD-LTINSLDPGTVNTKMLYAGWGACGIDVSRADNEFWLATSDQVEGINGRYFVGKGDSSASRAAYDSTNRSKLFEILEGITGVSY 356          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A2P6TE58_CHLSO (Short chain dehydrogenase reductase family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TE58_CHLSO)

HSP 1 Score: 241 bits (615), Expect = 6.420e-72
Identity = 139/276 (50.36%), Postives = 180/276 (65.22%), Query Frame = 2
Query:    8 LEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVE--GCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELA---RRAPEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTYT 820
            L GK F VTG+TDGIG HTA RLA +GATV+VHGR    V +AV  VE  G  SG A   G VAD++SL  +  L +EV A +  +D L+NNAGVFE     SEDG E T+AVNV AP+++T  LL+ V +     RVV V+S+SA+ S+D+ NLQ E+G +S H +YSLSKL + +F  ELA   R A   VTCN LDPGTV+TKML AGWG  GIP+K AN +   AT  +++G+SG Y+V  R   P   A D+   +RLW +LEE +   ++
Sbjct:    5 LLGKTFFVTGATDGIGAHTAQRLAAQGATVLVHGRNPGRVEQAVAAVERAGSGSGGAPPRGFVADLASLAQVRRLAEEVAASSPSVDVLINNAGVFEQQLRKSEDGFELTWAVNVAAPFLLTACLLEAVRE-----RVVVVSSISAASSIDWGNLQQERG-FSAHNAYSLSKLAEQLFTFELADRLRAAGSPVTCNCLDPGTVNTKMLSAGWGSIGIPVKEANYELKAATDPALAGTSGEYFVGGRIARPPSIARDKAEQQRLWRLLEEQTGAKWS 274          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A835YNH2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH2_9STRA)

HSP 1 Score: 238 bits (608), Expect = 7.890e-71
Identity = 135/276 (48.91%), Postives = 182/276 (65.94%), Query Frame = 2
Query:    2 RSLEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGG---YSDHASYSLSKLLDIMFNAELARR-APEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
            R L GK+ LVTGSTDGIG+HTA++LA +GATV+VHGR +  + +AVE V+  +S   +V GI+ADIS+L GM  L   V   T  LD L++NAG+FE+    +EDG+E  FA NVLAP+V TG LL L+ +A    RV+ V+S+S  Y+    + QFE+ G   +SDH SYSLSKL D M + E   R A   +T N+LDPGTV+TKML AGWGM GI +  ANDQ+ LATS+++ G SG+Y++S R         D  A ++LW+   ++S   Y
Sbjct:    6 RPLAGKIALVTGSTDGIGRHTATKLATDGATVLVHGRNQERLAKAVEGVKK-QSSNDQVHGILADISTLAGMRTLSTAVHQHTSVLDILVSNAGIFESCRRTTEDGTELVFATNVLAPFVTTGLLLPLL-RASAAARVITVSSMSQGYAAGLVDPQFERDGGSAFSDHRSYSLSKLCDAMLSMEFHERFASPTLTFNTLDPGTVNTKMLDAGWGMCGIAVNRANDQYTLATSENLKGVSGKYFISARETRANPACYDPVARKQLWDYCAKVSGFDY 279          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A061S8W3_9CHLO (Short chain dehydrogenase reductase family n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W3_9CHLO)

HSP 1 Score: 232 bits (592), Expect = 1.500e-68
Identity = 137/270 (50.74%), Postives = 172/270 (63.70%), Query Frame = 2
Query:   11 EGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEG-VTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
            EGKVFLVTGSTDGIG HTA  LA  G +VIVHGR E  VR+AV  VE    G  KV     D SSL+ +  L D+V      +D L+NNAGV++     S+DG E T+AVNVLAP+V+T  L ++V       RVVN AS+SA +SVD DNL  EKG +S H +YSLSKLLDI+   ELA R  E   T N+LDPGTV+TKML AGWG  GIP++SA D+FY++TS  + G SG Y+V +R       A D      LW + E+ + + +
Sbjct:   11 EGKVFLVTGSTDGIGLHTAKLLAAGGGSVIVHGRNELRVRDAVAEVERVARGNGKVASYTRDFSSLQEVKRLGDDVKRDFATIDVLVNNAGVYKEGKELSQDGFEMTYAVNVLAPFVLTSALHNIVTS-----RVVNTASISAGHSVDLDNLNQEKG-FSSHNAYSLSKLLDIILTFELAERLKEKPFTVNTLDPGTVNTKMLLAGWGPIGIPVESA-DEFYVSTSPDLEGVSGEYFVGKRRTRAPAAAYDRGLRETLWRLWEQQTGVRF 273          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A7S1HEF3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEF3_HEMAN)

HSP 1 Score: 232 bits (592), Expect = 5.490e-68
Identity = 126/271 (46.49%), Postives = 182/271 (67.16%), Query Frame = 2
Query:   17 KVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARR---APEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTYT 820
            K+ LVTGSTDGIG+HTA++LA++G  V++HGR +  +   V+ ++    G  +++  +AD +SL  + +L  E+ A+  R+D L+NNAGVF      + DG+E TF VNVLAP+++T  +LDLV K+  G +++ V+S+S SY++DFDNLQ +KG +SDH+SYSLSKL + M   ELA R   A  GVT N+LDPGTV+TKML AGWGM GI +  AN Q  LAT  S+ G +G+Y+V  R         D E  +RLW+++ +L+   Y+
Sbjct:   46 KIALVTGSTDGIGQHTATKLAQDGFKVLIHGRSQKRIDATVQRIKDKAPG-CELDTFLADFASLEDVRKLSKELHAKCPRIDLLINNAGVFSQSMQKTVDGNEMTFQVNVLAPFLLTSLVLDLVKKSEKG-KIIIVSSISQSYALDFDNLQMQKG-FSDHSSYSLSKLCNAMHAIELAERLKGALPGVTVNTLDPGTVNTKMLEAGWGMCGIDLSRANYQHTLATDPSLDGETGQYFVGGRNTKASPPCYDTEQRQRLWKIMTDLTGADYS 313          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A1L7H7G4_SACKO (Retinol dehydrogenase 14-like protein 094 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=A0A1L7H7G4_SACKO)

HSP 1 Score: 231 bits (588), Expect = 5.660e-68
Identity = 125/272 (45.96%), Postives = 181/272 (66.54%), Query Frame = 2
Query:    5 SLEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRA-PEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
            SL G+V+L+TGSTDGIGKHTA RLA+ G TV+VHGR  A   + VE ++   +G   +E   AD SSL  + ++  EV  R  R+D L+NNAGV+E     S++G E T AVNVLAP+++T  LLDL+ K     R++ V+S++ +Y++DF NLQFE+  YS  A+Y LSKL DI+F+ EL+ R  P G+  N  DPGTV+T ML   +G  GIPI+ A+++FYLAT    +G +G+Y+V  +  +    + D +  RRLW+++E+++  TY
Sbjct:    2 SLSGRVYLITGSTDGIGKHTALRLAQAGGTVLVHGRNRAKGEKVVEELKTA-TGNPNIELFTADFSSLDHIRQMSREVHERHSRIDVLINNAGVWENQRILSQEGYEMTLAVNVLAPFLLTSLLLDLIPKGRVDSRILIVSSMTQAYNIDFSNLQFERD-YSGFAAYGLSKLCDIVFSYELSDRLRPLGIIVNCCDPGTVNTNMLMKSYGPIGIPIEQADNEFYLATDPKFTGVTGKYFVQLQDTSSASISYDIKTRRRLWQIMEQMTGATY 271          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A5J4XR04_9CHLO (Short chain dehydrogenase reductase family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XR04_9CHLO)

HSP 1 Score: 223 bits (569), Expect = 3.230e-65
Identity = 121/271 (44.65%), Postives = 174/271 (64.21%), Query Frame = 2
Query:    8 LEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRA-PEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
            + GK +LVTGSTDGIG+HTAS+L   GA V++HGR +  V      ++    G  K+     +++S   + +  + + A  + +D L+NNAGVFE     SEDG E T+A+NVLAP+++T  L D+V       R+VNV+S+SA  S+DFDNLQ EKG +S H SYSLSKL  +MF  +LA    P+GVT N LDPGTV+TKML AGWG  GI +K AN ++ LAT  S++  +G+YYV+ R       A+D++  +RLW+++ + +   +
Sbjct:    6 VSGKTYLVTGSTDGIGRHTASKLVAAGANVLLHGRTQEKVTATKRDLDSIAKGN-KISSYTYNLASFSQIRKFAEAIRANHNNIDVLINNAGVFETQRSLSEDGYEMTWAINVLAPFLLTSLLKDVVTD-----RIVNVSSISAGSSIDFDNLQQEKG-FSSHNSYSLSKLASMMFTCDLAEHMKPKGVTVNCLDPGTVNTKMLIAGWGACGIDVKDANYEYKLATDPSLAKETGKYYVNGRESRLPAVAKDQKFRKRLWQIMTDQTGAIF 269          
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A061R794_9CHLO (Short chain dehydrogenase reductase family n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R794_9CHLO)

HSP 1 Score: 226 bits (575), Expect = 5.600e-65
Identity = 132/241 (54.77%), Postives = 162/241 (67.22%), Query Frame = 2
Query:   11 EGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEG-VTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRR 730
            EGKVFLVTGSTDGIG HTA  LA  G +VIVHGR E  VR+AV  VE    G  KV     D SSL+ +  L D+V      +D L+NNAGV++     S+DG E T+AVNVLAP+V+T  L ++V       RVVN AS+SA +SVD DNL  EKG +S H +YSLSKLLDI+   ELA R  E   T N+LDPGTV+TKML AGWG  GIP++SA D+FY++TS  + G SG Y+V +R
Sbjct:   11 EGKVFLVTGSTDGIGLHTAKLLAAGGGSVIVHGRNELRVRDAVAEVERVARGNGKVASYTRDFSSLQEVKRLGDDVKRDFATIDVLVNNAGVYKEGKELSQDGFEMTYAVNVLAPFVLTSALHNIVTS-----RVVNTASISAGHSVDLDNLNQEKG-FSSHNAYSLSKLLDIILTFELAERLKEKPFTVNTLDPGTVNTKMLLAGWGPIGIPVESA-DEFYVSTSPDLEGVSGEYFVGKR 244          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMR3_ECTSI5.420e-14381.85Oxidoreductase, short chain dehydrogenase/reductas... [more]
A0A6V2U0S1_HETAK5.060e-8352.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V5E2_9STRA9.710e-7851.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2P6TE58_CHLSO6.420e-7250.36Short chain dehydrogenase reductase family n=1 Tax... [more]
A0A835YNH2_9STRA7.890e-7148.91Oxidoreductase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A061S8W3_9CHLO1.500e-6850.74Short chain dehydrogenase reductase family n=2 Tax... [more]
A0A7S1HEF3_HEMAN5.490e-6846.49Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A1L7H7G4_SACKO5.660e-6845.96Retinol dehydrogenase 14-like protein 094 n=1 Tax=... [more]
A0A5J4XR04_9CHLO3.230e-6544.65Short chain dehydrogenase reductase family n=1 Tax... [more]
A0A061R794_9CHLO5.600e-6554.77Short chain dehydrogenase reductase family n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10185contigL-digitata_M_contig10185:3150..8693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMR3
PFAMsadh_short
Model size1769
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0009987,GO:0033554,GO:0050896,GO:0051716,GO:0071214,GO:0071470,GO:0104004
Exons6
Evalue3.77e-111
EggNOG OGsCOG1028@1|root,KOG1208@2759|Eukaryota
Descriptionoxidation-reduction process
Cds size609
COG categoryIQ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10185.1.1prot_L-digitata_M_contig10185.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig10185 4096..7430 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406623.5854118-UTR-L-digitata_M_contig10185:3149..40951682406623.5854118-UTR-L-digitata_M_contig10185:3149..4095Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10185 3150..4095 -
1682406623.6582737-UTR-L-digitata_M_contig10185:7430..75871682406623.6582737-UTR-L-digitata_M_contig10185:7430..7587Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10185 7431..7587 -
1682406623.6678288-UTR-L-digitata_M_contig10185:8636..86931682406623.6678288-UTR-L-digitata_M_contig10185:8636..8693Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig10185 8637..8693 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406623.6036737-CDS-L-digitata_M_contig10185:4095..42641682406623.6036737-CDS-L-digitata_M_contig10185:4095..4264Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10185 4096..4264 -
1682406623.620217-CDS-L-digitata_M_contig10185:4907..50921682406623.620217-CDS-L-digitata_M_contig10185:4907..5092Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10185 4908..5092 -
1682406623.6303756-CDS-L-digitata_M_contig10185:5828..59591682406623.6303756-CDS-L-digitata_M_contig10185:5828..5959Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10185 5829..5959 -
1682406623.6397817-CDS-L-digitata_M_contig10185:6754..68111682406623.6397817-CDS-L-digitata_M_contig10185:6754..6811Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10185 6755..6811 -
1682406623.649198-CDS-L-digitata_M_contig10185:7363..74301682406623.649198-CDS-L-digitata_M_contig10185:7363..7430Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10185 7364..7430 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig10185.1.1

>prot_L-digitata_M_contig10185.1.1 ID=prot_L-digitata_M_contig10185.1.1|Name=mRNA_L-digitata_M_contig10185.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=203bp
MHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVI
TGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLS
KLLDIMFNAELARRAPEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSAND
QFYLATSDSVSGSSGRYYVSRRAYTPPPPAEDEEACRRLWEVLEELSALT
YT*
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mRNA from alignment at L-digitata_M_contig10185:3150..8693-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig10185.1.1 ID=mRNA_L-digitata_M_contig10185.1.1|Name=mRNA_L-digitata_M_contig10185.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=5544bp|location=Sequence derived from alignment at L-digitata_M_contig10185:3150..8693- (Laminaria digitata LdigPH10_18mv male)
CAGGAGTCTTGAGGGCAAGGTTTTTCTGGTCACGGGCTCAACGGATGGCA TCGGAAAGTGAGTACAAAAACTTGACCGCCATTTTTCATCTCCATGAGAG ACGTACATATGTATAATATACGGCCCCGACTTTGGGGAGTCCGCAAGGGT TCTGCCCTAACACTGCACACAACATATGCAAATTAAATGCCCTTGCTGCT GCTATTTTTTTTGTGTGCCCAAAGCAAAAACGCAAGTGACATACCTGGTA GTATTTTTATAGAACTGCGAAGATATCAACTCGTTTGGACTGGTCGGTGG TACTTGTCCGGTCACTTGCCCGGTGGCCAATTATTTTTTCTTTCGCTTTC AAGAGCTTTTTCATGTTCTTCGTTCTTGCCCGGTGGCTGCGAGTAGCTGG TACAAGGGACGAACGCCTGCTGTGTTCTCCCTTTGCCGCTTGCGGCCACC CCCGGGATTTCAAGTCAATCACAATCCCGAAGGGGAACCTTGTACCTGGT ATGTATGTGTATTGATGGCACCGTCAACGTTTTGACCGATGTAGCGACAG CTCTTTGCAGATGCGGTACTGGGTTGTAGGTGCGACTTCCGTTCGAACGT TCTGCAGGATAGCGGTGTCAATACCGAAGCCGTCCGCGAGCCCGCCCGCC AAGCAGAGGCAGCACGGCCCTGTGTGCACATCGTCTACTCTTGACTTGAA GGCCGTACTGTATTCCGGACCATCGTCTGGCGAGTTGGACCGCCTTTTCA CATACCTGGCACAGCAATACCAGATATCCTGCAGCAGCAGTGTTGTGATA AACCAGGCTGAACTGCAAAATGTTTATACATATAATATGGCATTGTTCTA CTGCAGGCCAAGGATGGATGCACTTGACCTACTCCTGCTGGCGATCGTGC CGTTCCGTTTTGTTCCGCCCCGTCCCTTCTCATCCCACACCGTCCTTTCA TGTTTCAACCCCGCCGGGCCACGCCCCGCCCCGCTCCGTCCCACCCCACC CCACCCTGCTCCACCCCGCCCCACCCCGCCCCGCCCCGCCCCGCCCCGCC CCGTTCTGTTCCATCGACACTCCACCGGCACCGTACTGCACCGTACCGTA CCGCAGGCACACGGCCTCGCGGCTGGCGGAGGAAGGCGCGACCGTGATCG TGCACGGCCGGAGAGAGGCCGCCGTGCGAGAGGCGGTCGAGTTCGTGGAG GGATGTCGCAGCGGGGAGGCAAAGGTGGAGGGGATAGTCGCCGACATTAG CTCGCTGCGGGGCATGCACGAGCTGTGCGACGAGGTCCTCGCCCGGACAG ACAGGCTCGACTGCCTGCTGAATAATGCAGGTGAGGGGCGTCGGGCGGCA CGCGGCTGCTTTCGCGTCATCGGTGGGTCTTTTGGACTGCCGGCTTGTTA CTGGTTTGCCCTTTTTGATGGGTACGTACGTAGCCCAGCCGGTGGAAAGC GAGAGCCCGCCCGTCGTCCGCCCCGCGTATGTCTGTTGTGTATTGGCTGT GGTGTGCTGCCTGCGCTCTACTCTGTGTTCTGCTCTGTTTTACTGTACTG TACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTG TACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTG TACTGCACTTGTCACTGTACTGAGGGGGGGACTCCAGCATTGCCGCGTCC GTGCAAGCAGTCTTCATACCCCACAATCTCCGTCGCTCAATGACCCTGCT GCAAAACCCGTGCCACCAGTAATAGCAACAATATGCTGGCGGCGTTACAG CAGGAACGCCTTTTCCCACGAACTCCCCATGCCCTTGCGCTTGCTTCGCT CCCTTCATTGTGGCCCCTCTACATAACGGCAGGGGTTTTCGAGGCAGACT TTCACCACAGCGAAGACGGATCAGAGTACACGTTTGCAGGTAGGTGCAGT AAGTGCATGGTCGTTTTTACTTCCAGCATCTCCCGGTCCCCTTGTTCCCT CCGCTCTTGCTGTAGAGCTCGTACTCCTTTGGAAACTGCAACCACGTTTT GGAGACGCAGTACTTGGATTTTGAGTTGGATGTTTTTGCAGGACTAAATG GGTTACATTAAATGTACTCGCGGTTATAGAAAACCCACTTCTGTTAGCCG ACCGGAAGCATTGGCGTGGGACCCTCTACGTAGGAAAACCGTGGATCGGT CGCGTTGTTGTCATATTGTCTGGTCACCCTTTACCGGTTGGCTTCTTTCT AGCCGCAAGGGGAAAGCGGCTTGCACGTGAAGCGCCTGCCTCTCACCACA TCATATCCGACCGACCGGCCGACCGACTGGCCGACTGACCGACAGATCGG CAGACCGACCAACCAACCGACCGACCAATCGACAGACAGGCCGACAGGCT GACCGATATTCCGAACGACAGACCGACAGGCCGACACACCGACACACCGA CCGACCGACCGACCGATCGACCGACCGACCGACCGACCGACGTCCACAGG ATGGTGCGGCGGTGGCGGCGTCTCCCCTATTCACCTGTCGGAACGATCAA CACACTTGTTGTGAGATGGCGCTCGTAAAGCACCGAACAGCGGACCCTAA ACCAAGTGACCCCCCCTTCCCCCCCCGCCAGCGCCCCTTTCGTCTCCGGC GCGCCGTGGGGTCTACTTAACTTAACACACGCCAGCGCTCTTTTTTTCTG ACTCTGGTGCCCCGTGTTTTGTCGCATGAAATAGTGAACGTGCTCGCGCC GTACGTGATCACTGGCCGTCTGCTAGACTTGGTGGCAAAGGCGCCCGGGG GAGGGCGCGTGGTTAACGTGGCGAGCCTTTCCGCCTCGTACTCGGTCGAC TTCGACAACCTGCAGGTGAATGAGAGAGAGAGACGCCCTCGACCGAGCGC CACTCCCCCCCCAAGCGTGCACCCAACGCGTCCGTTTTTGTTGTTGTTGT TGTTGTTGGTGGTGGTGGTTTGGTGGTGGCGGTGGTGGCGGCGGTGGTGG TGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGGAGGGAGGGGGGGAGG TGGTAACGGTGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGCGGTGGTG TTGTGGTTGTTGTTGTTGTTGGTGGTGTCGTTGTTGTTGTTGTCGTTGTT GTTAATGTTGTCGTTGTTGTTGCCCTTGTTGTTGTCGTCGTCGTCCTCGT TGTCGTTGTCGTTGTTGTTGTTGCTGTTGTTTTCAAGCTGAGACAGGCCC CTACTCTACATATTTTTTTCTGATGTCCGTGTTTCGACAAGTAAGTATGG TTACTAAACAACACGGGCCTAAATGTACCTTTCACGACAACTGTATGCAG AACACTCATGACCGACGTATGACGCAGTTTGCAAAGCTGAGTATATCAAT CATGTTTTGGTCGCACTCACAATCCGACGCCTTTCTACTTTATGACGCTG TTTGCAAAGCTAAGCATGTTGTGTCAATCATGTTTTTGGTCGAACTCACA AGCTGGCGAATTTTAACACTTGTTATAAAGCCCCCACCGTCTTTGCTGTC CGCATCATCACCACATCGCATCACCGTCGCAACCGCCGCCGTGACCCCCA GTTTGAGAAGGGGGGATACAGCGACCACGCGTCGTACTCCCTGTCGAAGC TGCTGGACATCATGTTCAACGCGGAGCTTGCGAGGAGAGCCCCCGAGGGG GTGACGTGCAACTCCCTAGACCCGGGCACCGTCGACACCAAGATGCTTCG GGCCGGGTGGGGCATGAACGGAATTCCCATCAAGAGGTAAAATATGATGT AGCCCCTTTAGAACTGCACTCCCGTTTTGGGGACAAATTACTTGGAATTT GAGTCAAATATGTGTTTCTGTACAGTGCAGTGATAAAAGGGCTAAACACG GACAAATTTTGGGTGTTTTGGCGGTTTGGGTTTCACGCTATTTAGGGGGC TGTTGCGCACGCGTGCGCGCGCGTCGAGTTACCCTCGTTTCTTGCGCACT CTGCAGCTCACGTTTGTTTGTGGGACGAACGTAGTGAGCGCCCAAATGTT GGAGGTGTCTCTGTTCGGAGTAGGAACGGTGCTCTGTCTCGAAAGGGATG CATGGTTTTTGGTCAAATGACTACCCGTATTACACGGAAGCAAGCACACC CCGGTGATAACAATATTACCTTTAAAAATATCATCACCGGGTGTGCTGTT GTGGGTGGGTGTGCTAACCTAACGTATCCCGAGTGATAGACACCATGCGC GGGTATTAAAATGGCGGTCGAAAAACGAAATTAAAAAGATATCACCGGGT GTGCTCTTGTGGGGGAGTGTGTTATCTTAGGGGGGGGTGTTTTCTTCCGT GTTATACGGTAAGGCAAGCAACAAATGAGTACGTACCCCTAACCCCCCCC CGCCCTCTTCTTCTCGGTCGACTCTGTAGCGCAAACGACCAGTTCTACCT GGCGACGAGCGACAGCGTAAGCGGCAGCTCCGGGCGGTACTACGTCAGCC GAAGGGCGTACACACCGCCGCCCCCAGCCGAAGACGAAGAAGCGTGCCGC CGGCTGTGGGAGGTGTTGGAAGAGCTCAGCGCACTGACCTACACATGATG CCGTAAGTTCATACGCAGTACAGTTTGATTAACGCCGCCGGCTGTGGGAA GAAGTGTTGGAAGAGCTCAGCGCACTGACCTACGCATGATGCCGTAAGTT TAAACGAAGTACCATTTCGATCGTGGTCGTTTTTGTTTTTTGCTCGAGCC CAGCAGCGGGTGGGATCCACCCAGACAAGCCGGTGGATGGCTTGTGTTTC GGACTCGGGCTCCGTTGCTTGCTATATGTTTGTTGGACACCAACCTTCTG GTGCTGTATTTTTGCGCCTTGAGCTTATTTTCGCGTCTTGAGTATGTGGG TTGGACACCATTTTCTGCTGTATTTTTTTGGTCCTGAGCGCGTGGAAGAT GGCAAGGTGGGACGTTCGAACGGTGCAGCTCATTCACCGCAGAGCCACGT TCTTCTACCAGCCAAGTTTTCGCGTCCCAGAATGATTTTTGTTGCGTCTA AGTACGTAATTTTCACATATTTTAATTGATTCATTTCGGAAGGGTTGCAA CCGCACGAGTGGCGTTTTCGCATTTCGTCGACTGCCGAAAAGTGGAAACT TACCGCCTTCGGCTTCGTATTTATAGAACATGTACGTATTGATTTTTTTA TTTTTTTTCCCCTCCGGCGGATGGGAAATGGTGTGTAGACGTTGCCGTAG CATCAGATAGAAGTTTGCGCCCCCACGGAAATATGGCGCGGTATGGAGCG GGTCCATCACGGCACAGACGCGTTTTGGAGCTCGGCTCGAGAGTGCCGCC AAGCACTGCGCATCGTCCGGCGAGTGTAAAGTGCGATTGTACGCGTTAAC CCTTTTACCACAACACCGTGCAGAAGCATGTATGTGATTCTACTTCCAAG AAATTTGTCCCCAAAACGGGAGTGCGGTCCTAAATGAGTTAAGGGCGGGT AAGTTGCGGAAATAGATGGATGCTGCGGTGGCCGTCGCGTGCAA
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Coding sequence (CDS) from alignment at L-digitata_M_contig10185:3150..8693-

>mRNA_L-digitata_M_contig10185.1.1 ID=mRNA_L-digitata_M_contig10185.1.1|Name=mRNA_L-digitata_M_contig10185.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=609bp|location=Sequence derived from alignment at L-digitata_M_contig10185:3150..8693- (Laminaria digitata LdigPH10_18mv male)
ATGCACGAGCTGTGCGACGAGGTCCTCGCCCGGACAGACAGGCTCGACTG
CCTGCTGAATAATGCAGGGGTTTTCGAGGCAGACTTTCACCACAGCGAAG
ACGGATCAGAGTACACGTTTGCAGTGAACGTGCTCGCGCCGTACGTGATC
ACTGGCCGTCTGCTAGACTTGGTGGCAAAGGCGCCCGGGGGAGGGCGCGT
GGTTAACGTGGCGAGCCTTTCCGCCTCGTACTCGGTCGACTTCGACAACC
TGCAGTTTGAGAAGGGGGGATACAGCGACCACGCGTCGTACTCCCTGTCG
AAGCTGCTGGACATCATGTTCAACGCGGAGCTTGCGAGGAGAGCCCCCGA
GGGGGTGACGTGCAACTCCCTAGACCCGGGCACCGTCGACACCAAGATGC
TTCGGGCCGGGTGGGGCATGAACGGAATTCCCATCAAGAGCGCAAACGAC
CAGTTCTACCTGGCGACGAGCGACAGCGTAAGCGGCAGCTCCGGGCGGTA
CTACGTCAGCCGAAGGGCGTACACACCGCCGCCCCCAGCCGAAGACGAAG
AAGCGTGCCGCCGGCTGTGGGAGGTGTTGGAAGAGCTCAGCGCACTGACC
TACACATGA
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