mRNA_L-digitata_M_contig10185.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: D8LMR3_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR3_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 5.420e-143 Identity = 221/270 (81.85%), Postives = 236/270 (87.41%), Query Frame = 2
Query: 8 LEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
L KV+LVTGSTDGIGKHTASRLAEEGATV+VHGRRE+AVREAVE V G G+ KVEGIVAD+SSLRG + LCDEVL TDRLDCLLNNAGVFEADF HS+DG EYTFAVNVLAPYVITGRLLDL+AKAPGGGRVVNVASLSASYS+DFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAP+G+TCNSLDPGTV+TKMLRAGWGM GIP+KSANDQFYLATSD V+ SSG Y XXX EACRRLW VLEELS +Y
Sbjct: 48 LADKVYLVTGSTDGIGKHTASRLAEEGATVLVHGRRESAVREAVEHVGG---GKGKVEGIVADLSSLRGANHLCDEVLRLTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKGITCNSLDPGTVNTKMLRAGWGMGGIPVKSANDQFYLATSDDVTDSSGEYXXXXXXXXXXXXXXXXEACRRLWRVLEELSGFSY 314
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A6V2U0S1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2U0S1_HETAK) HSP 1 Score: 272 bits (695), Expect = 5.060e-83 Identity = 141/269 (52.42%), Postives = 185/269 (68.77%), Query Frame = 2
Query: 17 KVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEGV--TCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
K+F+VTGSTDGIG+HT+ +LAE GA VIVHGR A E V++++ +G K++ VAD+S +H L D++ + +DCL+NNAGVFE F + DG E TFAVNV AP+V+T RLL ++ K PG R++ V+S+S +DF+NLQFEKGGY +H+SYSLSKL D M E+A R G T N+LDPGTV+TKML AGWGM GIP+ AN++F+LATS V G +G+Y+ S R A D EA RRLWE LE + +TY
Sbjct: 61 KIFVVTGSTDGIGRHTSKKLAETGARVIVHGRNTARCEETVQWIKDI-TGNEKIDYFVADLSETSNVHTLADQICEKYSHIDCLINNAGVFEEQFQTTPDGFEMTFAVNVAAPFVLTKRLLPMLQKRPGS-RLIIVSSISQGSRIDFENLQFEKGGYDEHSSYSLSKLCDAMLAFEMAARFGSGAQPTVNTLDPGTVNTKMLLAGWGMCGIPVTRANNEFWLATSPDVEGVNGKYFTSCRESRASQVAYDPEARRRLWEYLERTTGVTY 327
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A7S2V5E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5E2_9STRA) HSP 1 Score: 259 bits (662), Expect = 9.710e-78 Identity = 144/278 (51.80%), Postives = 192/278 (69.06%), Query Frame = 2
Query: 14 GKVFLVTGSTDGIGKHTASRLAEEGA----TVIVHGRREAAVREAVEFVE----GCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARR--APEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
GKV+LVTGSTDGIG+HT RLA A TV+VHGR A AV++V G +VE IVADIS++RG+ L ++ AR RLDCL+NNAGVFE + +ED E TFAVNV+APY++T LLDL+ G R++NV+S+S Y V+FDNLQF+ GGYSDHA+YSLSKLL +M++ E A R +P+ +T NSLDPGTV+TKML AGWG GI + A+++F+LATSD V G +GRY+V + + A D +L+E+LE ++ ++Y
Sbjct: 81 GKVYLVTGSTDGIGRHTCGRLAALAADGDSTVVVHGRDPARCALAVDWVREKSLSAGGGGCRVESIVADISTIRGVASLANQFKARFGRLDCLINNAGVFEQSYQLTEDNLEMTFAVNVMAPYLLTFLLLDLMLPHKGS-RIINVSSISQGYDVNFDNLQFQNGGYSDHAAYSLSKLLMVMYSLESAERIGSPD-LTINSLDPGTVNTKMLYAGWGACGIDVSRADNEFWLATSDQVEGINGRYFVGKGDSSASRAAYDSTNRSKLFEILEGITGVSY 356
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A2P6TE58_CHLSO (Short chain dehydrogenase reductase family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TE58_CHLSO) HSP 1 Score: 241 bits (615), Expect = 6.420e-72 Identity = 139/276 (50.36%), Postives = 180/276 (65.22%), Query Frame = 2
Query: 8 LEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVE--GCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELA---RRAPEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTYT 820
L GK F VTG+TDGIG HTA RLA +GATV+VHGR V +AV VE G SG A G VAD++SL + L +EV A + +D L+NNAGVFE SEDG E T+AVNV AP+++T LL+ V + RVV V+S+SA+ S+D+ NLQ E+G +S H +YSLSKL + +F ELA R A VTCN LDPGTV+TKML AGWG GIP+K AN + AT +++G+SG Y+V R P A D+ +RLW +LEE + ++
Sbjct: 5 LLGKTFFVTGATDGIGAHTAQRLAAQGATVLVHGRNPGRVEQAVAAVERAGSGSGGAPPRGFVADLASLAQVRRLAEEVAASSPSVDVLINNAGVFEQQLRKSEDGFELTWAVNVAAPFLLTACLLEAVRE-----RVVVVSSISAASSIDWGNLQQERG-FSAHNAYSLSKLAEQLFTFELADRLRAAGSPVTCNCLDPGTVNTKMLSAGWGSIGIPVKEANYELKAATDPALAGTSGEYFVGGRIARPPSIARDKAEQQRLWRLLEEQTGAKWS 274
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A835YNH2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH2_9STRA) HSP 1 Score: 238 bits (608), Expect = 7.890e-71 Identity = 135/276 (48.91%), Postives = 182/276 (65.94%), Query Frame = 2
Query: 2 RSLEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGG---YSDHASYSLSKLLDIMFNAELARR-APEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
R L GK+ LVTGSTDGIG+HTA++LA +GATV+VHGR + + +AVE V+ +S +V GI+ADIS+L GM L V T LD L++NAG+FE+ +EDG+E FA NVLAP+V TG LL L+ +A RV+ V+S+S Y+ + QFE+ G +SDH SYSLSKL D M + E R A +T N+LDPGTV+TKML AGWGM GI + ANDQ+ LATS+++ G SG+Y++S R D A ++LW+ ++S Y
Sbjct: 6 RPLAGKIALVTGSTDGIGRHTATKLATDGATVLVHGRNQERLAKAVEGVKK-QSSNDQVHGILADISTLAGMRTLSTAVHQHTSVLDILVSNAGIFESCRRTTEDGTELVFATNVLAPFVTTGLLLPLL-RASAAARVITVSSMSQGYAAGLVDPQFERDGGSAFSDHRSYSLSKLCDAMLSMEFHERFASPTLTFNTLDPGTVNTKMLDAGWGMCGIAVNRANDQYTLATSENLKGVSGKYFISARETRANPACYDPVARKQLWDYCAKVSGFDY 279
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A061S8W3_9CHLO (Short chain dehydrogenase reductase family n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W3_9CHLO) HSP 1 Score: 232 bits (592), Expect = 1.500e-68 Identity = 137/270 (50.74%), Postives = 172/270 (63.70%), Query Frame = 2
Query: 11 EGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEG-VTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
EGKVFLVTGSTDGIG HTA LA G +VIVHGR E VR+AV VE G KV D SSL+ + L D+V +D L+NNAGV++ S+DG E T+AVNVLAP+V+T L ++V RVVN AS+SA +SVD DNL EKG +S H +YSLSKLLDI+ ELA R E T N+LDPGTV+TKML AGWG GIP++SA D+FY++TS + G SG Y+V +R A D LW + E+ + + +
Sbjct: 11 EGKVFLVTGSTDGIGLHTAKLLAAGGGSVIVHGRNELRVRDAVAEVERVARGNGKVASYTRDFSSLQEVKRLGDDVKRDFATIDVLVNNAGVYKEGKELSQDGFEMTYAVNVLAPFVLTSALHNIVTS-----RVVNTASISAGHSVDLDNLNQEKG-FSSHNAYSLSKLLDIILTFELAERLKEKPFTVNTLDPGTVNTKMLLAGWGPIGIPVESA-DEFYVSTSPDLEGVSGEYFVGKRRTRAPAAAYDRGLRETLWRLWEQQTGVRF 273
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A7S1HEF3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEF3_HEMAN) HSP 1 Score: 232 bits (592), Expect = 5.490e-68 Identity = 126/271 (46.49%), Postives = 182/271 (67.16%), Query Frame = 2
Query: 17 KVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARR---APEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTYT 820
K+ LVTGSTDGIG+HTA++LA++G V++HGR + + V+ ++ G +++ +AD +SL + +L E+ A+ R+D L+NNAGVF + DG+E TF VNVLAP+++T +LDLV K+ G +++ V+S+S SY++DFDNLQ +KG +SDH+SYSLSKL + M ELA R A GVT N+LDPGTV+TKML AGWGM GI + AN Q LAT S+ G +G+Y+V R D E +RLW+++ +L+ Y+
Sbjct: 46 KIALVTGSTDGIGQHTATKLAQDGFKVLIHGRSQKRIDATVQRIKDKAPG-CELDTFLADFASLEDVRKLSKELHAKCPRIDLLINNAGVFSQSMQKTVDGNEMTFQVNVLAPFLLTSLVLDLVKKSEKG-KIIIVSSISQSYALDFDNLQMQKG-FSDHSSYSLSKLCNAMHAIELAERLKGALPGVTVNTLDPGTVNTKMLEAGWGMCGIDLSRANYQHTLATDPSLDGETGQYFVGGRNTKASPPCYDTEQRQRLWKIMTDLTGADYS 313
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A1L7H7G4_SACKO (Retinol dehydrogenase 14-like protein 094 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=A0A1L7H7G4_SACKO) HSP 1 Score: 231 bits (588), Expect = 5.660e-68 Identity = 125/272 (45.96%), Postives = 181/272 (66.54%), Query Frame = 2
Query: 5 SLEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRA-PEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
SL G+V+L+TGSTDGIGKHTA RLA+ G TV+VHGR A + VE ++ +G +E AD SSL + ++ EV R R+D L+NNAGV+E S++G E T AVNVLAP+++T LLDL+ K R++ V+S++ +Y++DF NLQFE+ YS A+Y LSKL DI+F+ EL+ R P G+ N DPGTV+T ML +G GIPI+ A+++FYLAT +G +G+Y+V + + + D + RRLW+++E+++ TY
Sbjct: 2 SLSGRVYLITGSTDGIGKHTALRLAQAGGTVLVHGRNRAKGEKVVEELKTA-TGNPNIELFTADFSSLDHIRQMSREVHERHSRIDVLINNAGVWENQRILSQEGYEMTLAVNVLAPFLLTSLLLDLIPKGRVDSRILIVSSMTQAYNIDFSNLQFERD-YSGFAAYGLSKLCDIVFSYELSDRLRPLGIIVNCCDPGTVNTNMLMKSYGPIGIPIEQADNEFYLATDPKFTGVTGKYFVQLQDTSSASISYDIKTRRRLWQIMEQMTGATY 271
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A5J4XR04_9CHLO (Short chain dehydrogenase reductase family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XR04_9CHLO) HSP 1 Score: 223 bits (569), Expect = 3.230e-65 Identity = 121/271 (44.65%), Postives = 174/271 (64.21%), Query Frame = 2
Query: 8 LEGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRA-PEGVTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRRAYTPXXXAEDEEACRRLWEVLEELSALTY 817
+ GK +LVTGSTDGIG+HTAS+L GA V++HGR + V ++ G K+ +++S + + + + A + +D L+NNAGVFE SEDG E T+A+NVLAP+++T L D+V R+VNV+S+SA S+DFDNLQ EKG +S H SYSLSKL +MF +LA P+GVT N LDPGTV+TKML AGWG GI +K AN ++ LAT S++ +G+YYV+ R A+D++ +RLW+++ + + +
Sbjct: 6 VSGKTYLVTGSTDGIGRHTASKLVAAGANVLLHGRTQEKVTATKRDLDSIAKGN-KISSYTYNLASFSQIRKFAEAIRANHNNIDVLINNAGVFETQRSLSEDGYEMTWAINVLAPFLLTSLLKDVVTD-----RIVNVSSISAGSSIDFDNLQQEKG-FSSHNSYSLSKLASMMFTCDLAEHMKPKGVTVNCLDPGTVNTKMLIAGWGACGIDVKDANYEYKLATDPSLAKETGKYYVNGRESRLPAVAKDQKFRKRLWQIMTDQTGAIF 269
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Match: A0A061R794_9CHLO (Short chain dehydrogenase reductase family n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R794_9CHLO) HSP 1 Score: 226 bits (575), Expect = 5.600e-65 Identity = 132/241 (54.77%), Postives = 162/241 (67.22%), Query Frame = 2
Query: 11 EGKVFLVTGSTDGIGKHTASRLAEEGATVIVHGRREAAVREAVEFVEGCRSGEAKVEGIVADISSLRGMHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVITGRLLDLVAKAPGGGRVVNVASLSASYSVDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPEG-VTCNSLDPGTVDTKMLRAGWGMNGIPIKSANDQFYLATSDSVSGSSGRYYVSRR 730
EGKVFLVTGSTDGIG HTA LA G +VIVHGR E VR+AV VE G KV D SSL+ + L D+V +D L+NNAGV++ S+DG E T+AVNVLAP+V+T L ++V RVVN AS+SA +SVD DNL EKG +S H +YSLSKLLDI+ ELA R E T N+LDPGTV+TKML AGWG GIP++SA D+FY++TS + G SG Y+V +R
Sbjct: 11 EGKVFLVTGSTDGIGLHTAKLLAAGGGSVIVHGRNELRVRDAVAEVERVARGNGKVASYTRDFSSLQEVKRLGDDVKRDFATIDVLVNNAGVYKEGKELSQDGFEMTYAVNVLAPFVLTSALHNIVTS-----RVVNTASISAGHSVDLDNLNQEKG-FSSHNAYSLSKLLDIILTFELAERLKEKPFTVNTLDPGTVNTKMLLAGWGPIGIPVESA-DEFYVSTSPDLEGVSGEYFVGKR 244 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10185.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10185.1.1 >prot_L-digitata_M_contig10185.1.1 ID=prot_L-digitata_M_contig10185.1.1|Name=mRNA_L-digitata_M_contig10185.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=203bp MHELCDEVLARTDRLDCLLNNAGVFEADFHHSEDGSEYTFAVNVLAPYVIback to top mRNA from alignment at L-digitata_M_contig10185:3150..8693- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10185.1.1 ID=mRNA_L-digitata_M_contig10185.1.1|Name=mRNA_L-digitata_M_contig10185.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=5544bp|location=Sequence derived from alignment at L-digitata_M_contig10185:3150..8693- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10185:3150..8693- >mRNA_L-digitata_M_contig10185.1.1 ID=mRNA_L-digitata_M_contig10185.1.1|Name=mRNA_L-digitata_M_contig10185.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=609bp|location=Sequence derived from alignment at L-digitata_M_contig10185:3150..8693- (Laminaria digitata LdigPH10_18mv male)back to top |