mRNA_L-digitata_M_contig101824.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A059E5H0_9PROT (Glyco_trans_2-like domain-containing protein n=5 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A059E5H0_9PROT) HSP 1 Score: 231 bits (590), Expect = 5.360e-73 Identity = 118/130 (90.77%), Postives = 121/130 (93.08%), Query Frame = 1
Query: 1 MTSVAPPSVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVDAST 390
MTSVA PSVTVILPTFNRAHLIAESI+SLLAQTWPIEEIIVVDDGSTD TDRVVAAYERQVRYLKKANGGKLSALNVGLTCA GDLIWIMDDDDIAP D LENLI PFLE +TNISYGAL KFSV+AST
Sbjct: 1 MTSVAAPSVTVILPTFNRAHLIAESINSLLAQTWPIEEIIVVDDGSTDETDRVVAAYERQVRYLKKANGGKLSALNVGLTCARGDLIWIMDDDDIAPVDALENLIAPFLESPETNISYGALQKFSVNAST 130
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A3B9GZU9_9PROT (Glyco_trans_2-like domain-containing protein n=3 Tax=Hyphomonas TaxID=85 RepID=A0A3B9GZU9_9PROT) HSP 1 Score: 156 bits (395), Expect = 1.710e-43 Identity = 77/125 (61.60%), Postives = 94/125 (75.20%), Query Frame = 1
Query: 7 SVAPPSVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVD 381
S PSV+VILPTFNRAHLIA SI SL QT+PI EI+VVDDGSTD+T+ VVA + +VRY+++ NGGK +A+N GL GDL+WIMDDDD+AP D LE L+ PF+ T I+YGAL KF D
Sbjct: 13 STPAPSVSVILPTFNRAHLIAASIMSLFEQTYPISEILVVDDGSTDNTEAVVAGFADRVRYVRQENGGKNAAINTGLKGVEGDLVWIMDDDDLAPRDALERLVAPFIADPSTAITYGALQKFRED 137
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A062UID7_9PROT (Glyco_trans_2-like domain-containing protein n=1 Tax=Hyphomonas chukchiensis TaxID=1280947 RepID=A0A062UID7_9PROT) HSP 1 Score: 149 bits (375), Expect = 9.090e-41 Identity = 73/128 (57.03%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 7 SVAPPSVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVDAST 390
S + PSV+VILPT+NR+ LI SI++LL Q++PI EI+VVDDGS+D+T VVA + VRY+++ NGGK +A+N GL GDL+WIMDDDD+AP D LE L++PF+ T ISYGAL KF D T
Sbjct: 6 SKSSPSVSVILPTYNRSGLITASIETLLNQSYPIAEIVVVDDGSSDNTAEVVAKFGTSVRYIRRENGGKNAAINTGLRQVRGDLVWIMDDDDLAPVDALERLVSPFITEPSTAISYGALQKFREDPET 133
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A059G3T4_9PROT (Family 2 glycosyl transferase n=2 Tax=Hyphomonas oceanitis TaxID=81033 RepID=A0A059G3T4_9PROT) HSP 1 Score: 127 bits (320), Expect = 1.130e-32 Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 1
Query: 22 SVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVD 381
+VTV++PTFNR+ + ESI+SLLAQTWPI +IIV++DGS D T V+ AYE +V + K NGGK +ALN+ L S L+WI DDDD+A D L L+ L D N++YG +F+VD
Sbjct: 10 NVTVLIPTFNRSGFLVESIESLLAQTWPIHKIIVINDGSNDDTLEVLKAYEGRVDVISKPNGGKAAALNMALELVSDGLVWIFDDDDLALPDGLATLMKVLLNAPDANMAYGRHERFTVD 129
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A2W7Q0L3_9RHOB (Glycosyltransferase involved in cell wall biosynthesis n=1 Tax=Roseinatronobacter thiooxidans TaxID=121821 RepID=A0A2W7Q0L3_9RHOB) HSP 1 Score: 127 bits (318), Expect = 2.150e-32 Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 1
Query: 19 PSVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVD 381
P V+VILPTFNR +AE+I S+LAQ P +I+VVDDGSTD T + A + + Y+++ N GKL+A+ GL SGDL+WIMDDDDIA D L+NL+ PF++ + +SYG + +F D
Sbjct: 5 PRVSVILPTFNRHTYLAEAITSVLAQRAPPLDIVVVDDGSTDSTPDICAQFAHDITYVRQENAGKLAAIATGLDRTSGDLVWIMDDDDIAAPDALQNLVAPFMQNPELVLSYGRMTRFDDD 125
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: UPI001C7EB986 (glycosyltransferase n=1 Tax=Hyphomonas sp. WL0036 TaxID=2866160 RepID=UPI001C7EB986) HSP 1 Score: 125 bits (313), Expect = 7.620e-32 Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 25 VTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVDAST 390
++VILPTFNRA++IAE++DSL+AQT P+ EI+V+DDGSTD+T V+ Y ++V Y++K NGGK SALN+GL +GD IWI DDDD+ D E L S + G F++D+ T
Sbjct: 5 ISVILPTFNRANMIAETLDSLIAQTRPVREILVIDDGSTDNTHDVIMRYAQKVTYIRKENGGKASALNLGLERCTGDYIWICDDDDLLEPDACERLAGALDADSTLGFAAGKHEDFTIDSRT 126
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A258GVH3_9PROT (Glyco_trans_2-like domain-containing protein n=1 Tax=Alphaproteobacteria bacterium 32-64-14 TaxID=1970492 RepID=A0A258GVH3_9PROT) HSP 1 Score: 125 bits (313), Expect = 2.130e-31 Identity = 62/122 (50.82%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 22 SVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLK-KANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVDA 384
+V+V+LPTFNRA L+ E+IDS+L QT EII++DDGSTD T V AAY +V+Y++ NGGK +A+N GL A+G++IW+MDDDDIAP D L+ L+ P ++G+L KF++ A
Sbjct: 29 TVSVLLPTFNRAQLLGEAIDSVLEQTHLPLEIIILDDGSTDETPSVCAAYASKVKYVRISENGGKTAAINAGLELAAGNVIWVMDDDDIAPPDALKTLLAPLQADPKLGFTFGSLKKFTMTA 150
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A0Q7SZ96_9CAUL (Glycosyl transferase n=2 Tax=unclassified Caulobacter TaxID=2648921 RepID=A0A0Q7SZ96_9CAUL) HSP 1 Score: 121 bits (303), Expect = 3.870e-30 Identity = 61/122 (50.00%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 7 SVAPPSVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKF 372
S AP V++I+PTFNRA L+ E+++SL+AQ+ P EI+VVDDGS D T VV + V YL++ N GK +ALN+GL+ AS D +WI DDDDIA + LE L P D + +YG KF
Sbjct: 8 STAPLPVSIIIPTFNRARLLGEALNSLVAQSRPAAEILVVDDGSDDDTATVVERFGPAVTYLRQDNSGKAAALNLGLSLASQDAVWIFDDDDIAAPEALERLYAPLAADPDLDFTYGLCDKF 129
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A0D0QAD6_9RHOB (Putative glycosyltransferase n=1 Tax=Wenxinia marina DSM 24838 TaxID=1123501 RepID=A0A0D0QAD6_9RHOB) HSP 1 Score: 120 bits (301), Expect = 5.400e-30 Identity = 60/120 (50.00%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 22 SVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYGALPKFSVD 381
+V+ I+PTFNR+ L+AE +DSLL+QT P ++I+VVDDGSTD+T +V+ Y V Y++K NGGK SALN+ L+ +GD +WI DDDDIA A LE ++ F E +G F VD
Sbjct: 11 TVSAIVPTFNRSALLAECLDSLLSQTRPPDQILVVDDGSTDNTAEIVSRYAPAVSYVRKENGGKSSALNLALSMVTGDYVWICDDDDIAAAGGLEAMMRGFAENPSVAYVFGDYRSFQVD 130
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Match: A0A7X7GH48_RHOSO (Glycosyltransferase family 2 protein n=1 Tax=Rhodococcus sp. TaxID=1831 RepID=A0A7X7GH48_RHOSO) HSP 1 Score: 120 bits (300), Expect = 9.300e-30 Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 1
Query: 7 SVAPPSVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTDRVVAAYERQVRYLKKANGGKLSALNVGLTCASGDLIWIMDDDDIAPADPLENLITPFLECSDTNISYG 357
+V V+VI+PTFNRA L+ ++IDSLL QT P +IIVVDDGSTD T VV+ Y V+Y+ + NGGK +ALN GLT +G+ WI+DDDD+A D LE L + D SYG
Sbjct: 32 TVTTSDVSVIVPTFNRAALLGQTIDSLLRQTTPARQIIVVDDGSTDETAAVVSRYRGSVQYIYRPNGGKPAALNTGLTHVTGEYTWILDDDDVACPDALERLAAALDQNLDCGFSYG 148 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101824.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101824.1.1 >prot_L-digitata_M_contig101824.1.1 ID=prot_L-digitata_M_contig101824.1.1|Name=mRNA_L-digitata_M_contig101824.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=130bp MTSVAPPSVTVILPTFNRAHLIAESIDSLLAQTWPIEEIIVVDDGSTDHTback to top mRNA from alignment at L-digitata_M_contig101824:1..390- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101824.1.1 ID=mRNA_L-digitata_M_contig101824.1.1|Name=mRNA_L-digitata_M_contig101824.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=390bp|location=Sequence derived from alignment at L-digitata_M_contig101824:1..390- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101824:1..390- >mRNA_L-digitata_M_contig101824.1.1 ID=mRNA_L-digitata_M_contig101824.1.1|Name=mRNA_L-digitata_M_contig101824.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=390bp|location=Sequence derived from alignment at L-digitata_M_contig101824:1..390- (Laminaria digitata LdigPH10_18mv male)back to top |