mRNA_L-digitata_M_contig101782.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A2D8PV05_9PROT (Hydantoin utilization protein B n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PV05_9PROT) HSP 1 Score: 525 bits (1351), Expect = 1.240e-182 Identity = 251/305 (82.30%), Postives = 277/305 (90.82%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVGVM A K GIAKAEADGGAEDGD+WIFN+PYAGGTHLSDFK+VRPYF GEL+CWL+SAGHWHDVGGGVPGNYNPSATDCFQEGFV+PPVKLMD+GV+R D+VS+LTANSRLPGSSYGDLMGQINSLDLGVRRMDDLL+EYG +TVR VF+ELK+RS+ QMRSLI +L DG YS E+FLDNDGIED PL++ALDL I G TL FDFSRSADAC+GP+NISEST IAATYVALKHVFRDVPAN GVL+PITFVIPDGKILSAVAPRPVGGYTETILRLI +VF FS+ + IAPAN YGT
Sbjct: 62 PIFVGVMXFAVKAGIAKAEADGGAEDGDIWIFNEPYAGGTHLSDFKVVRPYFHDGELFCWLASAGHWHDVGGGVPGNYNPSATDCFQEGFVLPPVKLMDKGVIREDVVSILTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLEEYGDNTVRGVFAELKDRSSSQMRSLISELPDGVYSAEDFLDNDGIEDEPLRVALDLKIXGETLTFDFSRSADACAGPVNISESTAIAATYVALKHVFRDVPANAGVLDPITFVIPDGKILSAVAPRPVGGYTETILRLIXVVFCAFSQANSEIAPANGYGT 366
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A2E5PLN3_9PROT (Hydantoin utilization protein B n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PLN3_9PROT) HSP 1 Score: 524 bits (1350), Expect = 1.760e-182 Identity = 251/305 (82.30%), Postives = 276/305 (90.49%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVGVMS A K GI KA ADGGAEDGD+WIFNDPY GGTHLSDFKIVRPYF GEL+CWL+S HWHDVGGGVPGNYNPSATDCFQEGFV+PP KLMD+GVLR D+VSV+TANSRLPGSSYGDLMGQINSLDLG+RRMDDL+D+YG TV+ VF ELKERS +QMRSLIG+L DGTYS+E+FLDNDGIED PLK+ALD+TI G TLKFDFSRSA AC+GP+NIS +TT+AATYVALKHVFR+VPANGGVLEPI FVIPDGKILSAVAPRPVGGYTETI RLID+VFS F+K DP IAPAN YGT
Sbjct: 62 PIFVGVMSFAVKAGIEKAAADGGAEDGDLWIFNDPYVGGTHLSDFKIVRPYFHDGELFCWLASVAHWHDVGGGVPGNYNPSATDCFQEGFVLPPSKLMDKGVLREDVVSVVTANSRLPGSSYGDLMGQINSLDLGIRRMDDLVDDYGAVTVQSVFVELKERSRQQMRSLIGELPDGTYSSEDFLDNDGIEDKPLKVALDMTITGETLKFDFSRSAAACAGPLNISYTTTVAATYVALKHVFREVPANGGVLEPIAFVIPDGKILSAVAPRPVGGYTETIQRLIDVVFSAFAKADPDIAPANGYGT 366
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: F2J4J8_POLGS (5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) TaxID=991905 RepID=F2J4J8_POLGS) HSP 1 Score: 415 bits (1066), Expect = 1.690e-139 Identity = 198/305 (64.92%), Postives = 240/305 (78.69%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVGVM+ A K I KA A GG +GD+WIFNDPYAGGTHLSDF++V+P FRGG+++C+L+S GHWHDVGG VPGNYNP+AT+CFQEG ++PPVKL DRG R D+V +L+ANSRLP S YGDL GQIN+LDLG RRM LLDEYG T+ + SEL+ R+A+ MR+ I L GT S E+FLDNDG D PLKIALDLTIDG + DFSRS+ AC GP+NIS +TTIAA YVALKH+F DVPAN GVLEP+ F I +G +LS AP+PVGGYTETI+RLID+VF +++ P A A +YGT
Sbjct: 62 PIFVGVMAFAVKAVIDKAAAQGGVHEGDVWIFNDPYAGGTHLSDFRLVKPVFRGGKVFCYLASVGHWHDVGGNVPGNYNPAATECFQEGMLIPPVKLYDRGAFRQDVVDILSANSRLPLSLYGDLNGQINALDLGERRMAALLDEYGDATLAECLSELRSRAAQMMRAQIASLPSGTVSAEDFLDNDGNSDEPLKIALDLTIDGDRMVMDFSRSSPACMGPVNISRATTIAACYVALKHIFGDVPANAGVLEPVAFRIDEGSLLSVKAPKPVGGYTETIMRLIDVVFQAIAQIAPEEAMACAYGT 366
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A2E3PVN3_9RHOB (Hydantoin utilization protein B n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E3PVN3_9RHOB) HSP 1 Score: 414 bits (1065), Expect = 2.390e-139 Identity = 201/305 (65.90%), Postives = 239/305 (78.36%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVGVM+ A K I KA GG DGD+WIFNDPY GGTHLSDF++V+P FR G+L+C+L+S GHWHDVGG VPGNYNP+AT+CFQEG ++PPVKL DRG R D+V +L+ANSRLP S YGDL GQIN+LDLG RRM +LLD+YG TV D ELK R+A+ MR+ I L GT S E++LDNDGI D PLKIALDLTIDG T+ DFSRS+ AC+GP+NIS STTIAA YVALKH+F DVPAN GVLEP+ F I D +L+ AP+PVGGYTETILRLID+VF +K+ P A A +YGT
Sbjct: 62 PIFVGVMAFAVKAVIDKAAKSGGVHDGDVWIFNDPYDGGTHLSDFRLVKPVFRDGKLFCFLASVGHWHDVGGNVPGNYNPAATECFQEGMLIPPVKLYDRGEFRQDVVDILSANSRLPMSLYGDLNGQINALDLGTRRMGELLDDYGARTVGDCLVELKARAAKLMRAQIAALPQGTVSAEDWLDNDGIVDEPLKIALDLTIDGETMVMDFSRSSPACAGPVNISRSTTIAACYVALKHIFGDVPANAGVLEPVEFRIADASLLAVKAPKPVGGYTETILRLIDVVFQAVAKIAPEPAMACAYGT 366
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A2D6T1A1_9PROT (Hydantoin utilization protein B n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T1A1_9PROT) HSP 1 Score: 412 bits (1060), Expect = 1.060e-138 Identity = 201/305 (65.90%), Postives = 243/305 (79.67%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVG M+ A KT IAKA +G +GD++IFNDPY GGTHLSDFK+V+P++R GE+YC+L+S GHWHDVGG VPGNYNP AT+ FQEG ++PPVKL +G +R DIV +L ANSRLPGS YGDL GQIN+L+LG RR+ LLDEYG TV F+EL+ER+AR MRS I + GTYS +++LDNDGI D PLKIALDLTI G L FDFSRSA AC+GP+NIS ST IA+ YVA+KH+FRDVPAN GVLEPI FVIP+ ILS P+PVGGYTETILR+ID+VF F++ DPA + A +YGT
Sbjct: 63 PIFVGAMAFAVKTVIAKAAREGDMAEGDVYIFNDPYDGGTHLSDFKLVQPFYRDGEVYCYLASVGHWHDVGGNVPGNYNPVATESFQEGMLIPPVKLFVQGEIRNDIVEILKANSRLPGSLYGDLNGQINALELGHRRLTALLDEYGDGTVAAAFAELQERAARLMRSHIAEFPQGTYSCDDWLDNDGIVDEPLKIALDLTIAGDRLVFDFSRSAKACAGPVNISRSTAIASCYVAIKHIFRDVPANAGVLEPIDFVIPEDAILSVGPPKPVGGYTETILRVIDVVFGAFAQADPARSNACAYGT 367
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A2G1QUN1_9HYPH (Hydantoin utilization protein B n=3 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A2G1QUN1_9HYPH) HSP 1 Score: 410 bits (1054), Expect = 7.110e-138 Identity = 200/305 (65.57%), Postives = 238/305 (78.03%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVGVM+ A K I KA A GG +GD+WIFNDPY GGTHLSDF++V+P FR G L+C+L+S GHWHDVGG VPGNYNP AT+ FQEG ++PPVKL D+G R DIV +L+ANSRLP S YGDL GQIN+LDLG RR+ L+D+YG TV D ELKER+A+ MR+ I L DGT S E+FLDNDGI D PLKIALD+TIDG + DFSRS+ AC+GP+NIS STTIAA YVALKHVF DVPAN GVLEP+ F IP+ +LS AP+PVGGYTETILRLID+VF +++ P A A +YGT
Sbjct: 62 PIFVGVMAFAVKAVIDKAAASGGVHEGDVWIFNDPYDGGTHLSDFRLVKPVFRDGSLFCFLASVGHWHDVGGNVPGNYNPVATESFQEGMLIPPVKLYDKGEWRQDIVDILSANSRLPLSLYGDLNGQINALDLGERRIHALIDDYGDGTVADCLGELKERAAQMMRAQIASLPDGTVSAEDFLDNDGIVDEPLKIALDMTIDGDRMVLDFSRSSPACAGPVNISRSTTIAACYVALKHVFGDVPANAGVLEPVDFRIPEESLLSVKAPKPVGGYTETILRLIDVVFEAVARIAPDDAMACAYGT 366
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A1H5E3F7_9HYPH (N-methylhydantoinase B n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H5E3F7_9HYPH) HSP 1 Score: 410 bits (1053), Expect = 9.170e-138 Identity = 190/305 (62.30%), Postives = 243/305 (79.67%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVG M+ A + I K++ DGD+++FNDPY GGTHLSDFK+VRP+FR G+++CWL+S GHWHDVGG VPGNYNP AT+CFQEG ++PPVKL RG +R D+V ++TANSRLP S+YGDL GQIN+LDLGVRR+ LLDEYG DT+ ++L+ R+ + MR+ I +L DGTYS E+FLDNDGI++ PLKIALDL I+GGT+ FDFSR + AC+GP+NI+ STTIAA YVALKH+F+DVPAN GVL+PI F+IP+G +L+A AP+PVGGYTETILR+ID VF ++ P +YGT
Sbjct: 63 PIFVGAMAFAVRAVIEKSKRQADLADGDVYLFNDPYDGGTHLSDFKLVRPFFRNGQVFCWLASVGHWHDVGGNVPGNYNPIATECFQEGMLIPPVKLFARGEMRTDVVDIVTANSRLPNSAYGDLNGQINALDLGVRRLAALLDEYGDDTIAAALTQLRLRAGQLMRANITELKDGTYSAEDFLDNDGIKNEPLKIALDLKIEGGTMTFDFSRCSPACAGPLNIARSTTIAACYVALKHIFQDVPANAGVLDPIRFIIPEGSLLAATAPKPVGGYTETILRMIDTVFVALAQACPDRVNGCAYGT 367
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A2A4NA48_9RHOB (Hydantoin utilization protein B n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2A4NA48_9RHOB) HSP 1 Score: 410 bits (1053), Expect = 1.460e-137 Identity = 194/305 (63.61%), Postives = 238/305 (78.03%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVG MS A K I KA DG DGD++IFNDPYAGGTHLSDF++VRP++R G ++C+L+S GHWHDVGG VPGNYNP AT+CFQEG ++PPVKL +GVLR D+V +L +NSRLPGS YGDL GQIN+LDLG+RRM LL EYG DTV + EL+ R+AR M + I DL DGT+S E++LDNDGI D PLKIALDLT+ G + DFSRSA AC+GP+NI+ STT+A+ YVALKHVF DVPANGGVLEPI ++P+ +LS AP+PVGGYTETILR+ID++F + V P +YGT
Sbjct: 61 PIFVGAMSFAVKAVIEKAARDGDLADGDVYIFNDPYAGGTHLSDFRLVRPFYRDGVVFCYLASVGHWHDVGGNVPGNYNPVATECFQEGMLIPPVKLFRKGVLRQDVVDILQSNSRLPGSLYGDLNGQINALDLGMRRMGALLGEYGDDTVTEALGELRARAARLMAANIADLPDGTWSAEDYLDNDGIVDEPLKIALDLTVKGERMTLDFSRSAKACAGPVNIALSTTVASVYVALKHVFTDVPANGGVLEPIDVIVPEDSLLSVTAPKPVGGYTETILRIIDVIFCAMANVAPERVNGCAYGT 365
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A0A848WKD0_9RHOB (Hydantoinase B/oxoprolinase family protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A848WKD0_9RHOB) HSP 1 Score: 408 bits (1048), Expect = 8.300e-137 Identity = 194/305 (63.61%), Postives = 238/305 (78.03%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVGVM+ A K I KA A G +GD+WIFNDPY GGTHLSDF++V+P FR GE++C+L+S GHWHDVGG VPGNYNP+AT+CFQEG ++PPVKL D+G R D+V +L+ANSR P S YGDL GQIN++DLG +R++ LLDEYG T RD + LK+R+A MR+ I +L GT S E++LDNDGI+D PLKIALD+TIDG + DF+RS+ AC GP+NIS STTIAA YVALKH+F DVPAN GVLEP+ F I D +LS AP+PVGGYTETILRLID+VF S+V P A A +YGT
Sbjct: 62 PIFVGVMAFAVKAVIKKAAAQGDVNEGDVWIFNDPYDGGTHLSDFRLVKPVFRDGEVFCFLASVGHWHDVGGNVPGNYNPAATECFQEGMLIPPVKLYDKGEFRQDVVDILSANSRQPMSLYGDLNGQINAMDLGEKRLNALLDEYGVPTARDALAALKDRAATMMRAQISNLPSGTISAEDWLDNDGIDDVPLKIALDMTIDGDRMVLDFTRSSRACQGPVNISRSTTIAACYVALKHIFGDVPANAGVLEPVEFRIDDDSLLSVTAPKPVGGYTETILRLIDVVFQAMSQVAPKSAMACAYGT 366
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Match: A8TNE9_9PROT (5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8TNE9_9PROT) HSP 1 Score: 407 bits (1045), Expect = 2.430e-136 Identity = 191/305 (62.62%), Postives = 240/305 (78.69%), Query Frame = 1
Query: 1 PMFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYFRGGELYCWLSSAGHWHDVGGGVPGNYNPSATDCFQEGFVMPPVKLMDRGVLRPDIVSVLTANSRLPGSSYGDLMGQINSLDLGVRRMDDLLDEYGKDTVRDVFSELKERSARQMRSLIGDLADGTYSTEEFLDNDGIEDAPLKIALDLTIDGGTLKFDFSRSADACSGPINISESTTIAATYVALKHVFRDVPANGGVLEPITFVIPDGKILSAVAPRPVGGYTETILRLIDIVFSTFSKVDPAIAPANSYGT 915
P+FVG + A + I KA GG +GD++IFNDPY GGTHLSDF++VRPY+R GEL C+L+S GHWHDVGG VPGNYNP+AT+CFQEG ++PPVKL DRG+ R DIV +L +NSR PGS YGDL GQ+++L+LG RR+D L+DEYG +R+ EL+ R+ + MR+ I +L DGTYS E++LDNDGI D PL+IALDLTI G + DFSRSA AC GP+NI+ ST +A YVALKHVF DVPAN GVL+PITFVIP+ +LS VAP+PVGGYTETILR+ID+VFS ++ DPA + ++YGT
Sbjct: 61 PIFVGSNAFAVRAVIDKAARSGGMAEGDLYIFNDPYDGGTHLSDFRLVRPYYRDGELVCYLASVGHWHDVGGNVPGNYNPAATECFQEGMLIPPVKLYDRGIFRQDIVDILQSNSRQPGSLYGDLNGQLSALELGGRRLDALIDEYGVAIIREALVELRRRAEQLMRANIAELPDGTYSAEDWLDNDGIVDEPLRIALDLTIAGDRMTLDFSRSAKACQGPVNIARSTAVACCYVALKHVFTDVPANAGVLDPITFVIPEDSLLSVVAPKPVGGYTETILRIIDVVFSAIAQADPARSNGHAYGT 365 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101782.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101782.1.1 >prot_L-digitata_M_contig101782.1.1 ID=prot_L-digitata_M_contig101782.1.1|Name=mRNA_L-digitata_M_contig101782.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=304bp MFVGVMSCAGKTGIAKAEADGGAEDGDMWIFNDPYAGGTHLSDFKIVRPYback to top mRNA from alignment at L-digitata_M_contig101782:3..917- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101782.1.1 ID=mRNA_L-digitata_M_contig101782.1.1|Name=mRNA_L-digitata_M_contig101782.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig101782:3..917- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101782:3..917- >mRNA_L-digitata_M_contig101782.1.1 ID=mRNA_L-digitata_M_contig101782.1.1|Name=mRNA_L-digitata_M_contig101782.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=912bp|location=Sequence derived from alignment at L-digitata_M_contig101782:3..917- (Laminaria digitata LdigPH10_18mv male)back to top |