mRNA_L-digitata_M_contig101780.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101780.1.1
Unique NamemRNA_L-digitata_M_contig101780.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A2E7PLJ4_9PROT (GTP cyclohydrolase-2 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PLJ4_9PROT)

HSP 1 Score: 447 bits (1150), Expect = 3.650e-155
Identity = 239/305 (78.36%), Postives = 266/305 (87.21%), Query Frame = 1
Query:    1 ELARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            +LAR+SGL+KSS SLLLTGRRAA+LGL E+  GAVR++L+ GITA  VRMMADPA PQS      +SIS+I+P T  G +ETGAIELLKLA LLPAAVVA VP+ERL+YLSAWAE QALLTVEL+HVRNYQEIEARTL RVG ARVPL  +++V+IVAFRPSDGGREHLA+VI  PNT   VLVRLHSECFTGDLLGSLRCDCGDQLRGAI+EI K G GI+LYLAQEGRGIGLVNKLRAY LQD+G DTIDAN+QLGFEADERLYRPAAEMLR+LG S+VRLMTNNPDKVAAL+EW I V ERV
Sbjct:   45 QLARLSGLTKSSPSLLLTGRRAAILGLIEKPDGAVRMTLADGITAKTVRMMADPAGPQSDEQVPAISISQIDPTTRPGASETGAIELLKLAGLLPAAVVATVPDERLEYLSAWAETQALLTVELEHVRNYQEIEARTLQRVGAARVPLGEADDVKIVAFRPSDGGREHLAIVIGAPNTSAPVLVRLHSECFTGDLLGSLRCDCGDQLRGAIAEIVKAGGGIMLYLAQEGRGIGLVNKLRAYTLQDQGLDTIDANEQLGFEADERLYRPAAEMLRKLGVSSVRLMTNNPDKVAALEEWQIDVVERV 349          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A2E7I1D8_9PROT (GTP cyclohydrolase-2 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I1D8_9PROT)

HSP 1 Score: 445 bits (1145), Expect = 2.100e-154
Identity = 238/305 (78.03%), Postives = 264/305 (86.56%), Query Frame = 1
Query:    1 ELARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            +LAR+SGLSK S SLLLTGRRA +LGLT++  GAVR++L+ GITA+ VRMMADPA PQS  A   +SIS+I+P+   GT ETGAIELLKLA LLPAAVVA VP+ERL+YL AWA  Q LLTVEL+HVRNYQEIEARTL RVG A+VPL   +NVEIVAFRPSDGGREHLA+VI  PNT   VLVRLHSECFTGDLLGSLRCDCGDQLRGAI+EI K G GI+LYLAQEGRGIGLVNKLRAY LQD+G DTIDANQQLGFEADERLYRPAAEMLRQLG S++RLMTNNPDKVAAL+EW I V+ERV
Sbjct:   45 QLARMSGLSKMSLSLLLTGRRAKILGLTDRPGGAVRLALADGITAETVRMMADPAGPQSNRAMPAISISQIDPNRWPGTNETGAIELLKLAGLLPAAVVATVPDERLEYLPAWATAQELLTVELEHVRNYQEIEARTLGRVGAAQVPLGAEDNVEIVAFRPSDGGREHLAIVIGAPNTAAPVLVRLHSECFTGDLLGSLRCDCGDQLRGAIAEIGKAGGGIVLYLAQEGRGIGLVNKLRAYTLQDQGLDTIDANQQLGFEADERLYRPAAEMLRQLGVSSIRLMTNNPDKVAALKEWQIEVAERV 349          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A848WAZ0_9PROT (GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WAZ0_9PROT)

HSP 1 Score: 409 bits (1052), Expect = 4.440e-140
Identity = 217/304 (71.38%), Postives = 251/304 (82.57%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            LAR++ LSK + SLLLT RRAA+LGLT    GAVRISLSGGITAD VRMMADPA PQ    PA +SI+ I+ DT  G AE GAIEL KLA LLPAAVVAAVP ERL YL +WA+ ++LL V+LD++  Y++ EARTL RVGEA VPL  +EN  ++AFRP DGGREHLA+VI T + D  VLVR+HSECFTGDLLGSLRCDCGDQLRGA++EI+K GSG+LLY+AQEGRGIGLVNKLRAY LQD+GFDTIDAN+QLGF+ DER+Y PAAE+LRQLG S VRL+TNNP KV+AL E GI VSERV
Sbjct:   59 LARVAALSKGTPSLLLTARRAAILGLTNDPKGAVRISLSGGITADTVRMMADPAGPQPEQQPAALSIALIDRDTKPGAAELGAIELAKLARLLPAAVVAAVPAERLGYLPSWADTESLLVVDLDNIHQYRDAEARTLQRVGEATVPLSEAENTNVIAFRPPDGGREHLAIVIGTLDLDAPVLVRIHSECFTGDLLGSLRCDCGDQLRGAVAEINKAGSGVLLYMAQEGRGIGLVNKLRAYELQDQGFDTIDANEQLGFDPDERIYLPAAEILRQLGISKVRLLTNNPQKVSALAEGGIEVSERV 362          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A2E8XQA8_9PROT (GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XQA8_9PROT)

HSP 1 Score: 402 bits (1033), Expect = 2.190e-137
Identity = 220/304 (72.37%), Postives = 241/304 (79.28%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            LARI+GLSK++ SLLLT RRAA+L LT+   GAVRISLSGG+TAD VRMMADPA PQS      VSIS I+P T  G +E GAIELLKLACLLPAAVVA VP+ERL+YLSAWAE Q+LLT+ELDHVRNYQEIEARTL RVG ARVPL+VSE+VEIVAFRPSDGGREHLA+VI  P TD  VLVRLHSECFTGDLLGSLRCDCG                           IGL+NKLRAY LQD G DTIDANQQLGFEADERLYRPAAEMLRQLG  +VRL+TNNPDKV+AL+EW I V+ERV
Sbjct:   46 LARIAGLSKATPSLLLTARRAAILKLTDSPDGAVRISLSGGVTADTVRMMADPAGPQSDDLAPAVSISHIDPATRPGASEIGAIELLKLACLLPAAVVAPVPDERLEYLSAWAETQSLLTIELDHVRNYQEIEARTLQRVGAARVPLEVSEDVEIVAFRPSDGGREHLAIVIGDPPTDAPVLVRLHSECFTGDLLGSLRCDCGXXXXXXXXXXXXXXXXXXXXXXXXXXXIGLINKLRAYTLQDHGLDTIDANQQLGFEADERLYRPAAEMLRQLGIQSVRLLTNNPDKVSALREWQIDVTERV 349          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A2E3XEC2_9PROT (GTP cyclohydrolase-2 n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3XEC2_9PROT)

HSP 1 Score: 376 bits (965), Expect = 2.180e-127
Identity = 201/304 (66.12%), Postives = 239/304 (78.62%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            LAR++ LSK++ SLLLT RRA +LGLT+Q  GAVRISLS  ITA+ VRMMADPA  Q     + V+I  I+PDT  G AE GAIE+ KLA LLPA VVA +P+ER+ YL +WA  ++LL VEL  +  Y+E EARTL  VGEA VPL  SEN  ++AFRP DGGREHLA++I   +     L+R+HSECFTGDLLGSLRCDCGDQLRGA+SEI+K G G+LLY+AQEGRGIGLVNKLRAY LQDKGFDTIDAN+QLGF+ DER+Y+PAAE+L QLG S+VRL+TNNP K+ AL E GI V ERV
Sbjct:   24 LARMAALSKNTPSLLLTARRATILGLTDQINGAVRISLSHTITAEVVRMMADPAGRQPDNYKSVVTIDLIDPDTEPGAAELGAIEIAKLARLLPATVVATLPKERMAYLPSWANTESLLVVELGDISQYREAEARTLECVGEATVPLSDSENTRVIAFRPPDGGREHLAIIIGNFDPKSDCLIRIHSECFTGDLLGSLRCDCGDQLRGAVSEINKSGGGLLLYMAQEGRGIGLVNKLRAYELQDKGFDTIDANEQLGFDPDERIYQPAAEILEQLGVSSVRLLTNNPQKIDALIEKGIAVVERV 327          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A2S6QJ83_9PROT (GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QJ83_9PROT)

HSP 1 Score: 370 bits (949), Expect = 2.160e-124
Identity = 196/304 (64.47%), Postives = 237/304 (77.96%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            LARIS LSK + SLL+T RRA++LGL     GAVRISL+  ITA+ VRMMADP  PQ       +SI+ I+ DT  G AE GAIE+ KL+ LLPA VVA +P+E+L YLS+WAE+++LL VEL+ +R Y+  EARTL  V EA VPL  SE  +I+AFRP DG REHLA+VI   NT+  VLVR+HSECFTGDLL SLRCDCGDQLRGAI+EI+K G G+LLY+AQEGRGIGLVNKLRAY LQDKG+DT+DAN+QLGF+ DER+Y+PA E+L QL  S +RL+TNNP KV AL++ GI V ERV
Sbjct:   63 LARISALSKENPSLLITARRASILGLINDPRGAVRISLADEITAEVVRMMADPTGPQPQKGLTALSIARIDQDTAPGAAELGAIEIAKLSRLLPATVVATIPKEKLSYLSSWAESESLLAVELEDIRLYRSSEARTLKNVSEAEVPLSESETTKIMAFRPPDGSREHLAIVIGELNTEQAVLVRIHSECFTGDLLASLRCDCGDQLRGAIAEINKAGGGVLLYMAQEGRGIGLVNKLRAYQLQDKGYDTLDANEQLGFDYDERIYQPAVEILNQLDISKIRLLTNNPQKVRALEDEGIEVFERV 366          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A7D5N0B8_9PROT (GTP cyclohydrolase-2 n=1 Tax=Defluviicoccus sp. TaxID=2682137 RepID=A0A7D5N0B8_9PROT)

HSP 1 Score: 313 bits (803), Expect = 1.830e-102
Identity = 174/304 (57.24%), Postives = 213/304 (70.07%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            L  ++ +S+ + + +LT RRAAVLGLT+  L AV ++L GG+TA+ +  +ADP SP       P  I+E        + E+ A+ ++K A L+PAA VA + + + D L+ WA    LL V+   V  Y    ARTL  V EARVPL   EN  I+AFRP DGG EHLA+V+N P     VL RLHSECFTGDLLGSLRCDCGDQLRGAI EI+  G G+LLYLAQEGRGIGLVNKLRAY LQD+GFDT+DAN+QLGF+ADER+Y PAA+MLR LG+S VRLMTNNP KV +L   GI V ERV
Sbjct:   54 LRTLAEVSRGALAAVLTARRAAVLGLTQGGLRAVTVTLDGGLTAEQMLALADPLSPTPAVTDQPFRIAEAQ----QYSCESAAVLMMKTARLIPAAAVAPLSDPQADDLAQWALRHGLLAVDAGDVFQYDFTSARTLKPVSEARVPLAGVENARIIAFRPLDGGLEHLAVVLNDPQPPAPVLTRLHSECFTGDLLGSLRCDCGDQLRGAIREIAAGGGGLLLYLAQEGRGIGLVNKLRAYELQDRGFDTLDANEQLGFDADERVYVPAAQMLRHLGFSRVRLMTNNPAKVDSLARCGIAVEERV 353          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A523FGC5_9PROT (GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FGC5_9PROT)

HSP 1 Score: 312 bits (799), Expect = 4.850e-102
Identity = 177/304 (58.22%), Postives = 212/304 (69.74%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            L R+  LS +S +L LT RRAA+LGL+      V   L+ GI A  VR +ADPA+  +   P P+ +    P    G   + A+EL KLA LLPAA+ A V  +       WA  + LL VE   +  YQ+  AR+L  V +ARVPL  +EN  IVA+RPSDGG EHLA++I  P  D  VL RLHSECFTGDLL SLRCDCGDQLRGAI +I++ GSG+L+YLAQEGRGIGLVNKLRAY LQD GFDTI AN+QLGF+ADER+Y PAAE+LR LGYS VRL+TNNP+KVAAL   GITV ERV
Sbjct:   41 LERLERLSGASPALSLTRRRAAILGLSPLTTEVVTFELAQGIAAQTVRDIADPAAAIAIKPPRPLDV----PSADLGACCSAAVELTKLARLLPAALTAPVDLKPGQDAKTWASGENLLVVEATDIEAYQQSAARSLRPVSQARVPLTSAENARIVAYRPSDGGIEHLAIIIGDPRADAPVLTRLHSECFTGDLLASLRCDCGDQLRGAIGKIAEAGSGVLVYLAQEGRGIGLVNKLRAYQLQDDGFDTIGANEQLGFDADERVYLPAAEILRDLGYSQVRLLTNNPEKVAALSRCGITVVERV 340          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A7V7KC21_9PROT (GTP cyclohydrolase-2 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7V7KC21_9PROT)

HSP 1 Score: 311 bits (798), Expect = 1.480e-101
Identity = 171/307 (55.70%), Postives = 219/307 (71.34%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLT---EQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            L +++ +S S+ +L +TGRRAAV+GL     +    V ++ +  ++A+ +R +ADP S     APA  S+     +T     ++ A+ L KLA LLPAAV AA+ +   D L+AW     LL V+   +  Y+   ARTL  V EARVPL  +++  I+AFRP DGG EHLA++I  P  D+ VLVRLHSECFTGDLLGSLRCDCGDQL+GAI EI+K GSG+LLYLAQEGRGIGLVNKLRAY LQD+GFDT+DAN+QLGF+ADER+Y PAA MLRQLG+S +RL+TNNPDKV+AL   G  V +RV
Sbjct:   58 LEKLAAMSHSAPALAITGRRAAVIGLAGIRAKMAKVVTVTAANDLSAEMIRDLADPLSGLDPAAPAMKSLRLTAAETAAHGCDSAAVGLAKLARLLPAAVTAALADPESDDLAAWTTRHDLLLVDGGDIFQYENTAARTLRAVSEARVPLLHADDTRIIAFRPIDGGLEHLAIIIGAPKADEPVLVRLHSECFTGDLLGSLRCDCGDQLQGAIREIAKAGSGVLLYLAQEGRGIGLVNKLRAYELQDQGFDTMDANEQLGFDADERVYLPAARMLRQLGFSRIRLLTNNPDKVSALAACGFAVEDRV 364          
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Match: A0A3N1LI93_9PROT (GTP cyclohydrolase-2 n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1LI93_9PROT)

HSP 1 Score: 310 bits (793), Expect = 6.530e-101
Identity = 176/304 (57.89%), Postives = 216/304 (71.05%), Query Frame = 1
Query:    4 LARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRMMADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVAAVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDVSENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLRCDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDTIDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGITVSERV 915
            LAR   L+ SS SL +T RRA++LGL     G VR+SLSG   A  +R +ADP S  +  AP  V+++   P      A++ A+ L K+A LLPAAV A +       +  WA  + LL VE   + +Y    AR L +VGEARVPL  +EN  I+AFRPSDGG EH+A+VI TP+  + +L R+HSECFTGDLL SLRCDCGDQLRGAI EI+++G+G+LLYLAQEGRGIGLVNKLRAY LQD+GFDT+DAN QLGF+ADER+Y PAAEMLRQ+G+  VRLMTNNP KV AL   GI V ERV
Sbjct:   58 LARFVRLAGSSPSLAMTSRRASLLGLGSDGPGVVRVSLSGTPVAQRLRDLADPLSAPA-IAPTVVAVTAARPLD----ADSAAVALAKIARLLPAAVTATIGLIDSRQVEDWARLEGLLIVEAAAILDYPVDTARRLAKVGEARVPLAGAENTRIIAFRPSDGGLEHIAIVIGTPDPSEPILARIHSECFTGDLLASLRCDCGDQLRGAIREIAQRGAGVLLYLAQEGRGIGLVNKLRAYQLQDEGFDTVDANLQLGFDADERIYVPAAEMLRQIGFDRVRLMTNNPLKVEALGHCGIAVVERV 356          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101780.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7PLJ4_9PROT3.650e-15578.36GTP cyclohydrolase-2 n=1 Tax=Rhodospirillaceae bac... [more]
A0A2E7I1D8_9PROT2.100e-15478.03GTP cyclohydrolase-2 n=2 Tax=Alphaproteobacteria T... [more]
A0A848WAZ0_9PROT4.440e-14071.38GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria b... [more]
A0A2E8XQA8_9PROT2.190e-13772.37GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria b... [more]
A0A2E3XEC2_9PROT2.180e-12766.12GTP cyclohydrolase-2 n=2 Tax=Rhodospirillales TaxI... [more]
A0A2S6QJ83_9PROT2.160e-12464.47GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria b... [more]
A0A7D5N0B8_9PROT1.830e-10257.24GTP cyclohydrolase-2 n=1 Tax=Defluviicoccus sp. Ta... [more]
A0A523FGC5_9PROT4.850e-10258.22GTP cyclohydrolase-2 n=1 Tax=Alphaproteobacteria b... [more]
A0A7V7KC21_9PROT1.480e-10155.70GTP cyclohydrolase-2 n=1 Tax=Rhodospirillaceae bac... [more]
A0A3N1LI93_9PROT6.530e-10157.89GTP cyclohydrolase-2 n=1 Tax=Stella humosa TaxID=9... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101780contigL-digitata_M_contig101780:6..920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123366.TH3_01475
Preferred nameribA
PFAMsGTP_cyclohydro2
Model size915
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00293,RC02504
KEGG koko:K01497
KEGG ReactionR00425
KEGG Pathwayko00740,ko00790,ko01100,ko01110,ko02024,map00740,map00790,map01100,map01110,map02024
KEGG ModuleM00125
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.22e-95
EggNOG OGsCOG0807@1|root,COG0807@2|Bacteria,1MWZR@1224|Proteobacteria,2TR82@28211|Alphaproteobacteria,2JQNP@204441|Rhodospirillales
EC3.5.4.25
DescriptionCatalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
Cds size915
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406622.5328164-CDS-L-digitata_M_contig101780:5..9201682406622.5328164-CDS-L-digitata_M_contig101780:5..920Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101780 6..920 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101780.1.1prot_L-digitata_M_contig101780.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101780 6..920 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101780.1.1

>prot_L-digitata_M_contig101780.1.1 ID=prot_L-digitata_M_contig101780.1.1|Name=mRNA_L-digitata_M_contig101780.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp
ELARISGLSKSSASLLLTGRRAAVLGLTEQALGAVRISLSGGITADNVRM
MADPASPQSGTAPAPVSISEINPDTPTGTAETGAIELLKLACLLPAAVVA
AVPEERLDYLSAWAENQALLTVELDHVRNYQEIEARTLVRVGEARVPLDV
SENVEIVAFRPSDGGREHLALVINTPNTDDTVLVRLHSECFTGDLLGSLR
CDCGDQLRGAISEISKQGSGILLYLAQEGRGIGLVNKLRAYALQDKGFDT
IDANQQLGFEADERLYRPAAEMLRQLGYSTVRLMTNNPDKVAALQEWGIT
VSERV
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mRNA from alignment at L-digitata_M_contig101780:6..920-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101780.1.1 ID=mRNA_L-digitata_M_contig101780.1.1|Name=mRNA_L-digitata_M_contig101780.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig101780:6..920- (Laminaria digitata LdigPH10_18mv male)
GAACTTGCACGCATCTCAGGGCTCTCAAAGTCTTCGGCATCCCTGCTTCT CACCGGGCGGCGAGCCGCTGTGCTGGGCCTGACCGAACAAGCGCTTGGCG CGGTGCGGATTTCACTCAGCGGCGGCATTACGGCCGACAACGTCCGCATG ATGGCTGACCCGGCAAGCCCCCAATCCGGCACAGCACCTGCACCAGTGTC CATATCCGAGATCAACCCCGACACGCCAACGGGTACAGCAGAAACCGGTG CAATCGAACTCCTGAAACTCGCCTGTCTGCTGCCCGCCGCGGTGGTGGCC GCGGTTCCTGAAGAGCGGCTTGATTACCTATCAGCCTGGGCAGAGAATCA GGCGCTGCTGACCGTAGAGCTCGATCATGTCCGGAACTATCAGGAGATTG AGGCACGCACATTGGTGCGGGTGGGTGAAGCCCGGGTTCCGCTCGATGTC AGCGAAAATGTCGAGATTGTCGCGTTCCGTCCCTCCGACGGTGGCCGGGA ACATCTCGCACTGGTGATCAACACCCCAAATACAGATGACACGGTCCTTG TAAGATTGCATTCCGAGTGCTTCACCGGCGACCTGCTCGGCAGCCTGCGC TGCGATTGCGGGGATCAGCTCCGCGGAGCGATTTCAGAGATCAGCAAACA GGGCAGTGGCATCCTGCTTTATCTGGCGCAGGAAGGACGCGGTATCGGTC TTGTAAACAAGCTCCGTGCTTATGCCCTGCAAGACAAAGGTTTCGATACC ATCGATGCCAATCAGCAACTTGGCTTCGAAGCCGACGAACGGCTTTACAG GCCGGCTGCTGAAATGCTGCGTCAGCTCGGATATTCGACAGTTCGCCTGA TGACCAACAATCCAGATAAAGTTGCAGCATTGCAGGAATGGGGAATTACC GTCAGCGAACGCGTT
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Coding sequence (CDS) from alignment at L-digitata_M_contig101780:6..920-

>mRNA_L-digitata_M_contig101780.1.1 ID=mRNA_L-digitata_M_contig101780.1.1|Name=mRNA_L-digitata_M_contig101780.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig101780:6..920- (Laminaria digitata LdigPH10_18mv male)
GAACTTGCACGCATCTCAGGGCTCTCAAAGTCTTCGGCATCCCTGCTTCT
CACCGGGCGGCGAGCCGCTGTGCTGGGCCTGACCGAACAAGCGCTTGGCG
CGGTGCGGATTTCACTCAGCGGCGGCATTACGGCCGACAACGTCCGCATG
ATGGCTGACCCGGCAAGCCCCCAATCCGGCACAGCACCTGCACCAGTGTC
CATATCCGAGATCAACCCCGACACGCCAACGGGTACAGCAGAAACCGGTG
CAATCGAACTCCTGAAACTCGCCTGTCTGCTGCCCGCCGCGGTGGTGGCC
GCGGTTCCTGAAGAGCGGCTTGATTACCTATCAGCCTGGGCAGAGAATCA
GGCGCTGCTGACCGTAGAGCTCGATCATGTCCGGAACTATCAGGAGATTG
AGGCACGCACATTGGTGCGGGTGGGTGAAGCCCGGGTTCCGCTCGATGTC
AGCGAAAATGTCGAGATTGTCGCGTTCCGTCCCTCCGACGGTGGCCGGGA
ACATCTCGCACTGGTGATCAACACCCCAAATACAGATGACACGGTCCTTG
TAAGATTGCATTCCGAGTGCTTCACCGGCGACCTGCTCGGCAGCCTGCGC
TGCGATTGCGGGGATCAGCTCCGCGGAGCGATTTCAGAGATCAGCAAACA
GGGCAGTGGCATCCTGCTTTATCTGGCGCAGGAAGGACGCGGTATCGGTC
TTGTAAACAAGCTCCGTGCTTATGCCCTGCAAGACAAAGGTTTCGATACC
ATCGATGCCAATCAGCAACTTGGCTTCGAAGCCGACGAACGGCTTTACAG
GCCGGCTGCTGAAATGCTGCGTCAGCTCGGATATTCGACAGTTCGCCTGA
TGACCAACAATCCAGATAAAGTTGCAGCATTGCAGGAATGGGGAATTACC
GTCAGCGAACGCGTT
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