mRNA_L-digitata_M_contig101770.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101770.1.1
Unique NamemRNA_L-digitata_M_contig101770.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: A0A4Q5SI52_9SPHN (Glutamate synthase large subunit (Fragment) n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q5SI52_9SPHN)

HSP 1 Score: 369 bits (946), Expect = 7.060e-127
Identity = 183/252 (72.62%), Postives = 206/252 (81.75%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEAAE 756
            MQLTYTVRNTHRAVGTR SSE+T  +GMS L + H+H+RLRGSAGQSLGAFLC+GITLEVFGD+NDYVGKGL GG I+VRPMVSSP+ S+ NTIIGNTVLYGAT+G+L+AAGQAGERFAVRNSGA+VVVEGCGANGCEYMT G AV+LG VG NFGAGMTGGMAF+ D +  F   AN ESIVWQRL SA+WE  L  LVE H + TDSKWS+ +L DWDR    FWQV PKEM+ R+  PL D     AAE
Sbjct:    1 MQLTYTVRNTHRAVGTRLSSEVTRTFGMSSLADGHIHVRLRGSAGQSLGAFLCKGITLEVFGDSNDYVGKGLSGGTIVVRPMVSSPIDSRRNTIIGNTVLYGATSGRLFAAGQAGERFAVRNSGAEVVVEGCGANGCEYMTNGTAVVLGQVGANFGAGMTGGMAFVYDEDASFASRANPESIVWQRLASAHWEQKLRDLVEAHAEATDSKWSQGLLEDWDRALGHFWQVVPKEMLTRLAHPLDDSPEAVAAE 252
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: A0A6H2DNS7_9SPHN (Glutamate synthase large subunit n=14 Tax=root TaxID=1 RepID=A0A6H2DNS7_9SPHN)

HSP 1 Score: 395 bits (1014), Expect = 2.740e-124
Identity = 194/252 (76.98%), Postives = 213/252 (84.52%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEAAE 756
            MQLTYTVRNTHRAVGTRFS+E+TAKYGM  L EDHVH+RLRGSAGQSLGAFLCQG+TLEVFGDANDYVGKGLCGGKIIVRPMVSSPL S+ NTI+GNTVLYGATAGQL+A+GQA                    NGCEYMTGGN V+LG VGNNFGAGMTGGMAFILD + +FEK+AN ESI+WQRL+S YWE HL ALVE H +TTDSKWSE+ILRDWDRWR+RFWQVCPKEMV R+  PLSD +AIEAAE
Sbjct: 1257 MQLTYTVRNTHRAVGTRFSAEVTAKYGMMDLPEDHVHVRLRGSAGQSLGAFLCQGLTLEVFGDANDYVGKGLCGGKIIVRPMVSSPLDSKANTIVGNTVLYGATAGQLFASGQAXXXXXXXXXXXXXXXXXXXXNGCEYMTGGNVVVLGAVGNNFGAGMTGGMAFILDVDRNFEKLANPESIIWQRLESDYWEEHLKALVEAHHKTTDSKWSETILRDWDRWRERFWQVCPKEMVSRLEHPLSDTEAIEAAE 1508
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: UPI001C0DA3F2 (glutamate synthase large subunit n=1 Tax=Sphingomonas sp. XMGL2 TaxID=2842451 RepID=UPI001C0DA3F2)

HSP 1 Score: 386 bits (991), Expect = 5.140e-121
Identity = 191/247 (77.33%), Postives = 210/247 (85.02%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQA 741
            MQLTYTVRNTHRAVGTRFS+EI AKYGMS L + HVHIRLRGSAGQSLGAF C+GITLEVFGDANDYVGKGL G  I+VRPMVSS L S++N I+GNTVLYGATAG+L+AAGQAGERFAVRNSGADVVVEGCGANGCEYMTGG AVILG VG+NFGAGMTGGMAF+LD  + F + AN ESI WQRL SA+WE  L ALV  H   TDS+W+ S+L DWDRWRDRFWQV PKEM+ R+  PL D QA
Sbjct: 1258 MQLTYTVRNTHRAVGTRFSAEIVAKYGMSALADGHVHIRLRGSAGQSLGAFACKGITLEVFGDANDYVGKGLSGATIVVRPMVSSQLESKENAIVGNTVLYGATAGRLFAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGTAVILGKVGDNFGAGMTGGMAFVLDEHDVFARRANPESITWQRLASAHWEAKLKALVAAHAVATDSRWAHSVLDDWDRWRDRFWQVVPKEMLTRLPHPLVDAQA 1504
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: A0A4S1XE58_9SPHN (Glutamate synthase large subunit n=1 Tax=Sphingomonas gei TaxID=1395960 RepID=A0A4S1XE58_9SPHN)

HSP 1 Score: 384 bits (985), Expect = 3.330e-120
Identity = 189/252 (75.00%), Postives = 212/252 (84.13%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEAAE 756
            MQLTY+VRNTHRAVGTR SSE+T K+GMS LN++HV +RLRGSAGQSLGAFLC+GITLEVFGDANDYVGKGL GG I+VRPMVSSPL SQDNTIIGNTVLYGAT+G+L+AAGQAGERFAVRNSGA+VVVEGCGANGCEYMTGG AV+LG VG NFGAGMTGGMAF+ D +  FE  AN ESIVWQRL SA+WE  L  L+E H + TDSKWS+ IL DWDR    FWQ+ PKEM+ R+  PL D   + AAE
Sbjct: 1250 MQLTYSVRNTHRAVGTRLSSEVTRKFGMSTLNDNHVQVRLRGSAGQSLGAFLCKGITLEVFGDANDYVGKGLSGGVIVVRPMVSSPLASQDNTIIGNTVLYGATSGRLFAAGQAGERFAVRNSGAEVVVEGCGANGCEYMTGGTAVVLGKVGMNFGAGMTGGMAFVYDPDAGFEARANPESIVWQRLSSAHWEAKLRGLIEAHAEATDSKWSQGILEDWDRSIGHFWQIVPKEMLTRLPYPLDDSVELIAAE 1501
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: A0A7X9WNZ0_9SPHN (Glutamate synthase large subunit n=2 Tax=Bacteria TaxID=2 RepID=A0A7X9WNZ0_9SPHN)

HSP 1 Score: 383 bits (984), Expect = 4.800e-120
Identity = 188/252 (74.60%), Postives = 214/252 (84.92%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEAAE 756
            MQLTYTVRNTHRAVGTR SSE+T K+GMS L + HVH+RLRGSAGQSLGAFLC+GITLEVFG++NDYVGKGL GG I+VRPMVSSPLVSQDNTIIGNTVLYGAT+G+LYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGG AV+LG VG NFGAGMTGGMAF+ D ++ F   AN ESIVWQR+ SA+WE  L ++VE H + TDS+WS+S+L +WDR    FWQV PKEM+ R+  PL+D     AAE
Sbjct: 1254 MQLTYTVRNTHRAVGTRLSSEVTNKFGMSALADGHVHVRLRGSAGQSLGAFLCKGITLEVFGESNDYVGKGLSGGVIVVRPMVSSPLVSQDNTIIGNTVLYGATSGRLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGTAVVLGKVGMNFGAGMTGGMAFVYDEDQSFASRANPESIVWQRIASAHWEARLRSMVEAHAEATDSEWSKSLLEEWDRALGHFWQVVPKEMLERLPVPLNDNAEAVAAE 1505
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: UPI001B062F4F (Glutamate synthase large subunit n=1 Tax=Sphingobium sp. TaxID=1912891 RepID=UPI001B062F4F)

HSP 1 Score: 379 bits (974), Expect = 1.270e-118
Identity = 191/253 (75.49%), Postives = 212/253 (83.79%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQA-IEAAE 756
            MQLTYTVRNTHRAVGTRFS+ +T K+GMS L + HVH+RLRG+AGQSLGAFLC+G+TLEVFGDANDYVGKGL GG I+VRPMVSSPL SQ NTIIGNTVLYGATAG+L+AAGQAGERFAVRNSGA VVVEGCGANG EYMTGG AVILG  G NFGAGMTGGMAF+ D +  F K AN ESIVWQRL SA+WEG L  LVE H + TDS W+ +IL DWDR R  FWQVCPKEM+ R+  PLSD +A + AAE
Sbjct: 1255 MQLTYTVRNTHRAVGTRFSAMVTQKFGMSTLQDGHVHVRLRGTAGQSLGAFLCKGVTLEVFGDANDYVGKGLSGGVIVVRPMVSSPLESQMNTIIGNTVLYGATAGKLFAAGQAGERFAVRNSGAHVVVEGCGANGLEYMTGGVAVILGTTGGNFGAGMTGGMAFVYDEDNSFAKRANPESIVWQRLASAHWEGVLRDLVEEHARRTDSAWAHAILHDWDRVRGHFWQVCPKEMMTRLAHPLSDHEADVVAAE 1507
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: A0A396RMK4_9SPHN (Glutamate synthase large subunit n=1 Tax=Sphingomonas gilva TaxID=2305907 RepID=A0A396RMK4_9SPHN)

HSP 1 Score: 378 bits (970), Expect = 4.690e-118
Identity = 190/252 (75.40%), Postives = 209/252 (82.94%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEAAE 756
            MQLTYTVRNTHRAVGTR SSEIT  +GMS L + HVH+RLRGSAGQSLGAFLC+GITLEVFGD+NDYVGKGL GG I VRPMVSSPL SQDNTIIGNTVLYGAT+G+LYAAGQAGERFAVRNSGA+VVVEGCGANGCEYMTGG AVILG VG+NFGAGMTGGMAF+ D +  FE  AN +SIVWQRL SA+W+G L  LV  H + TDSKW+  +L DW R    FWQVCPKEM+ R+  PL DR    AAE
Sbjct: 1256 MQLTYTVRNTHRAVGTRLSSEITRAFGMSRLADGHVHVRLRGSAGQSLGAFLCKGITLEVFGDSNDYVGKGLSGGIIAVRPMVSSPLASQDNTIIGNTVLYGATSGRLYAAGQAGERFAVRNSGAEVVVEGCGANGCEYMTGGTAVILGRVGDNFGAGMTGGMAFVYDPDRTFEARANPDSIVWQRLASAHWDGVLKDLVAAHVEATDSKWARGLLEDWGRVVGDFWQVCPKEMLARLAHPLDDRPEAVAAE 1507
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: A0A0Q8XD85_9SPHN (Glutamate synthase n=2 Tax=unclassified Sphingomonas TaxID=196159 RepID=A0A0Q8XD85_9SPHN)

HSP 1 Score: 377 bits (968), Expect = 8.500e-118
Identity = 189/252 (75.00%), Postives = 209/252 (82.94%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEAAE 756
            MQLTY+VRNTHRAVGTR SSE+T K+GMS L ++HV +RLRGSAGQSLGAFLC+GITLEVFGDANDYVGKGL GG I+VRPMVSSPL SQDNTIIGNTVLYGAT+G+L+AAGQAGERFAVRNSGA+VVVEGCGANGCEYMTGG AV+LG VG NFGAGMTGGMAF+ D +  F   AN ESIVWQRL SA+WE  L  LVE H  +TDSKWS+ IL DWDR    FWQV PKEM+ R+  PL D     AAE
Sbjct: 1250 MQLTYSVRNTHRAVGTRLSSEVTRKFGMSTLADNHVQVRLRGSAGQSLGAFLCKGITLEVFGDANDYVGKGLSGGVIVVRPMVSSPLASQDNTIIGNTVLYGATSGRLFAAGQAGERFAVRNSGAEVVVEGCGANGCEYMTGGTAVVLGKVGMNFGAGMTGGMAFVYDADGSFAARANPESIVWQRLASAHWEAKLRGLVEAHADSTDSKWSQGILEDWDRVIGLFWQVVPKEMLTRLSHPLDDAVEAVAAE 1501
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: UPI00053BDBC0 (glutamate synthase large subunit n=1 Tax=Sphingomonas sp. 37zxx TaxID=1550073 RepID=UPI00053BDBC0)

HSP 1 Score: 376 bits (966), Expect = 1.710e-117
Identity = 187/249 (75.10%), Postives = 208/249 (83.53%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIE 747
            MQLTY+VRNTHRAVGTR SSEIT  +GMS L + HVH+RLRGSAGQSLGAFLC+G+TLEVFGDANDYVGKGL GG+I+VRPMVSSPL SQDNTI+GNTVLYGAT+G+L AAGQAGERFAVRNSGA+VVVEGCGANGCEYMTGG AV+LG VG+NFGAGMTGGMAFI D E  F + AN ESIVW RL SA+WEG L  L+  H   TDSKWS  +L DWDR R  FWQV PKEM+ R+  P+ DR A E
Sbjct: 1253 MQLTYSVRNTHRAVGTRLSSEITRTFGMSKLADGHVHVRLRGSAGQSLGAFLCKGVTLEVFGDANDYVGKGLSGGRIVVRPMVSSPLASQDNTILGNTVLYGATSGRLLAAGQAGERFAVRNSGAEVVVEGCGANGCEYMTGGVAVVLGKVGHNFGAGMTGGMAFIYDPENRFGERANPESIVWNRLASAHWEGVLRDLIAAHHDATDSKWSGGLLDDWDRVRGHFWQVVPKEMLERLAVPIDDRSAPE 1501
[Close]
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Match: A0A494TLH8_SPHPE (Glutamate synthase large subunit n=1 Tax=Sphingomonas paeninsulae TaxID=2319844 RepID=A0A494TLH8_SPHPE)

HSP 1 Score: 374 bits (961), Expect = 9.390e-117
Identity = 186/252 (73.81%), Postives = 206/252 (81.75%), Query Frame = 1 
Query:    1 MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGAFLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVLYGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGPVGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALVERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEAAE 756
            MQLTYTVRNTHRAVGTR S+EITA YGMS LN+ HV +RLRGSAGQSLGAFLC+GITL+VFGDANDYVGKGL GG I VRPMVSSPL SQ NTIIGNTVLYGAT+G+L+AAG+AGERFAVRNSGADVVVEGCGANGCEYMTGG AVILG VG NFGA     MAF+LD +  F + ANG+SIVWQRL S YWE  +  L+  H   TDSKWS +IL DW+RWR  FWQVCPKEM+ R+  PL D +   AAE
Sbjct: 1264 MQLTYTVRNTHRAVGTRLSAEITALYGMSALNDGHVEVRLRGSAGQSLGAFLCKGITLQVFGDANDYVGKGLSGGIITVRPMVSSPLESQHNTIIGNTVLYGATSGKLFAAGRAGERFAVRNSGADVVVEGCGANGCEYMTGGAAVILGTVGENFGAXXXXXMAFVLDQDGSFTRRANGDSIVWQRLSSTYWETKVRGLIAEHAIATDSKWSNAILDDWERWRGSFWQVCPKEMLTRLASPLDDTEIAVAAE 1515
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101770.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Q5SI52_9SPHN7.060e-12772.62Glutamate synthase large subunit (Fragment) n=1 Ta... [more]
A0A6H2DNS7_9SPHN2.740e-12476.98Glutamate synthase large subunit n=14 Tax=root Tax... [more]
UPI001C0DA3F25.140e-12177.33glutamate synthase large subunit n=1 Tax=Sphingomo... [more]
A0A4S1XE58_9SPHN3.330e-12075.00Glutamate synthase large subunit n=1 Tax=Sphingomo... [more]
A0A7X9WNZ0_9SPHN4.800e-12074.60Glutamate synthase large subunit n=2 Tax=Bacteria ... [more]
UPI001B062F4F1.270e-11875.49Glutamate synthase large subunit n=1 Tax=Sphingobi... [more]
A0A396RMK4_9SPHN4.690e-11875.40Glutamate synthase large subunit n=1 Tax=Sphingomo... [more]
A0A0Q8XD85_9SPHN8.500e-11875.00Glutamate synthase n=2 Tax=unclassified Sphingomon... [more]
UPI00053BDBC01.710e-11775.10glutamate synthase large subunit n=1 Tax=Sphingomo... [more]
A0A494TLH8_SPHPE9.390e-11773.81Glutamate synthase large subunit n=1 Tax=Sphingomo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101770contigL-digitata_M_contig101770:162..920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog317655.Sala_2140
Preferred namegltB
PFAMsGATase_2,GXGXG,Glu_syn_central,Glu_synthase
Model size759
Max annot lvl204457|Sphingomonadales
KEGG rclassRC00006,RC00010,RC02799
KEGG koko:K00265
KEGG ReactionR00093,R00114,R00248
KEGG Pathwayko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.62e-121
EggNOG OGsCOG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,1MU7B@1224|Proteobacteria,2TRHQ@28211|Alphaproteobacteria,2K19P@204457|Sphingomonadales
EC1.4.1.13,1.4.1.14
DescriptionGlutamate synthase
Cds size759
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406622.3708947-CDS-L-digitata_M_contig101770:161..9201682406622.3708947-CDS-L-digitata_M_contig101770:161..920Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101770 162..920 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101770.1.1prot_L-digitata_M_contig101770.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101770 162..920 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101770.1.1

>prot_L-digitata_M_contig101770.1.1 ID=prot_L-digitata_M_contig101770.1.1|Name=mRNA_L-digitata_M_contig101770.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=253bp
MQLTYTVRNTHRAVGTRFSSEITAKYGMSVLNEDHVHIRLRGSAGQSLGA
FLCQGITLEVFGDANDYVGKGLCGGKIIVRPMVSSPLVSQDNTIIGNTVL
YGATAGQLYAAGQAGERFAVRNSGADVVVEGCGANGCEYMTGGNAVILGP
VGNNFGAGMTGGMAFILDTEEDFEKMANGESIVWQRLDSAYWEGHLLALV
ERHQQTTDSKWSESILRDWDRWRDRFWQVCPKEMVHRIVQPLSDRQAIEA
AE*
back to top

mRNA from alignment at L-digitata_M_contig101770:162..920-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101770.1.1 ID=mRNA_L-digitata_M_contig101770.1.1|Name=mRNA_L-digitata_M_contig101770.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=759bp|location=Sequence derived from alignment at L-digitata_M_contig101770:162..920- (Laminaria digitata LdigPH10_18mv male)
ATGCAGCTCACCTATACCGTGCGCAACACACACCGCGCGGTCGGCACCCG
CTTCTCGTCCGAGATCACCGCCAAATATGGCATGAGCGTACTGAACGAGG
ACCATGTCCATATCCGTCTGCGCGGGTCCGCCGGTCAGTCGCTCGGCGCC
TTCCTCTGCCAGGGGATCACGCTGGAGGTGTTCGGCGATGCCAATGACTA
TGTCGGCAAGGGTCTGTGCGGCGGCAAGATCATTGTCCGCCCGATGGTCA
GCTCGCCGCTGGTCAGCCAGGACAATACGATCATCGGCAATACCGTGCTC
TACGGCGCCACCGCCGGGCAGCTTTACGCCGCCGGACAGGCCGGCGAGCG
GTTCGCGGTGCGCAACAGCGGGGCCGATGTCGTGGTCGAGGGCTGCGGCG
CCAATGGCTGCGAATATATGACCGGCGGCAATGCCGTGATCCTGGGGCCG
GTCGGCAATAATTTCGGGGCCGGCATGACCGGCGGCATGGCCTTCATTCT
CGATACCGAAGAGGATTTCGAGAAAATGGCCAATGGCGAAAGCATCGTCT
GGCAGCGGCTCGACAGCGCTTATTGGGAGGGGCACCTGCTGGCCCTGGTC
GAGCGGCACCAGCAGACCACCGACAGCAAATGGTCCGAATCGATCCTGCG
CGACTGGGACCGCTGGCGCGACCGCTTCTGGCAGGTCTGCCCCAAGGAAA
TGGTCCACCGGATTGTTCAGCCGCTTTCGGATAGACAGGCGATCGAGGCG
GCCGAATAG
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig101770:162..920-

>mRNA_L-digitata_M_contig101770.1.1 ID=mRNA_L-digitata_M_contig101770.1.1|Name=mRNA_L-digitata_M_contig101770.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=759bp|location=Sequence derived from alignment at L-digitata_M_contig101770:162..920- (Laminaria digitata LdigPH10_18mv male)
ATGCAGCTCACCTATACCGTGCGCAACACACACCGCGCGGTCGGCACCCG
CTTCTCGTCCGAGATCACCGCCAAATATGGCATGAGCGTACTGAACGAGG
ACCATGTCCATATCCGTCTGCGCGGGTCCGCCGGTCAGTCGCTCGGCGCC
TTCCTCTGCCAGGGGATCACGCTGGAGGTGTTCGGCGATGCCAATGACTA
TGTCGGCAAGGGTCTGTGCGGCGGCAAGATCATTGTCCGCCCGATGGTCA
GCTCGCCGCTGGTCAGCCAGGACAATACGATCATCGGCAATACCGTGCTC
TACGGCGCCACCGCCGGGCAGCTTTACGCCGCCGGACAGGCCGGCGAGCG
GTTCGCGGTGCGCAACAGCGGGGCCGATGTCGTGGTCGAGGGCTGCGGCG
CCAATGGCTGCGAATATATGACCGGCGGCAATGCCGTGATCCTGGGGCCG
GTCGGCAATAATTTCGGGGCCGGCATGACCGGCGGCATGGCCTTCATTCT
CGATACCGAAGAGGATTTCGAGAAAATGGCCAATGGCGAAAGCATCGTCT
GGCAGCGGCTCGACAGCGCTTATTGGGAGGGGCACCTGCTGGCCCTGGTC
GAGCGGCACCAGCAGACCACCGACAGCAAATGGTCCGAATCGATCCTGCG
CGACTGGGACCGCTGGCGCGACCGCTTCTGGCAGGTCTGCCCCAAGGAAA
TGGTCCACCGGATTGTTCAGCCGCTTTCGGATAGACAGGCGATCGAGGCG
GCCGAATAG
back to top