mRNA_L-digitata_M_contig101731.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A6H5KYK6_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYK6_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.960e-18 Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+ Y +LGKSDLVVSK CLGTMTWGEQNSDEEAFEQ +MAF EFGVNF+
Sbjct: 77 MEYSRLGKSDLVVSKACLGTMTWGEQNSDEEAFEQCNMAFHEFGVNFI 124
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A7S0HHP2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHP2_9CRYP) HSP 1 Score: 80.1 bits (196), Expect = 3.020e-18 Identity = 35/48 (72.92%), Postives = 44/48 (91.67%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+RY +LG SDLVVS+VCLGTMTWG+QN++EEA +QL+ AFDEFGVNF+
Sbjct: 26 MRYNKLGDSDLVVSEVCLGTMTWGKQNTEEEAIKQLNTAFDEFGVNFI 73
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A836CJ26_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ26_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 6.870e-18 Identity = 36/48 (75.00%), Postives = 45/48 (93.75%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
++Y +LG SDLVVS+VCLGTMTWGEQN+DEEA+EQL +AFDEFG+NF+
Sbjct: 18 MKYVKLGSSDLVVSEVCLGTMTWGEQNTDEEAYEQLSVAFDEFGINFI 65
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A835Z0T2_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T2_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 7.740e-17 Identity = 35/48 (72.92%), Postives = 44/48 (91.67%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
++Y +LG SDLVVS+VCLGTMTWGEQNSDEEA++QL +A DEFG+NF+
Sbjct: 53 MKYVKLGSSDLVVSEVCLGTMTWGEQNSDEEAYQQLKLAVDEFGINFI 100
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: L1JG80_GUITC (Aldo_ket_red domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JG80_GUITC) HSP 1 Score: 79.0 bits (193), Expect = 4.130e-16 Identity = 33/48 (68.75%), Postives = 44/48 (91.67%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+RY +LG SDL+VS+VCLGTMTWG+QN++EEA +QL+ AFD+FGVNF+
Sbjct: 1 MRYNKLGDSDLIVSEVCLGTMTWGKQNTEEEAIQQLNTAFDDFGVNFI 48
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A7S1DYG4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DYG4_HEMAN) HSP 1 Score: 78.6 bits (192), Expect = 7.990e-16 Identity = 33/48 (68.75%), Postives = 44/48 (91.67%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+RY +LG SDL+VS+VCLGTMTWG+QNS+E+A +QLD AFD++GVNF+
Sbjct: 80 MRYNKLGDSDLLVSEVCLGTMTWGKQNSEEQAMKQLDCAFDDYGVNFI 127
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A7S1TTW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTW4_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.830e-15 Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+ YR+LG SDLVVS+VCLGTMTWGEQN++ EA QL+ AF++FGVNF+
Sbjct: 1 MEYRRLGDSDLVVSEVCLGTMTWGEQNTEAEAHAQLNSAFNDFGVNFL 48
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0PCZ1_GUITH (Aldo/keto reductase (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0PCZ1_GUITH) HSP 1 Score: 72.4 bits (176), Expect = 7.960e-15 Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+ Y +LG SDL VS+ CLGTMTWG+QN+ EE EQL++AFDEFGVNF+
Sbjct: 51 MEYVKLGNSDLKVSRCCLGTMTWGQQNTMEEGVEQLNVAFDEFGVNFI 98
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A7S4EDL0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDL0_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.210e-14 Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+R RQLG SDLVVS VCLGTMTWG+QN+ EE +QLD AFDE+G+NF+
Sbjct: 28 IRRRQLGTSDLVVSDVCLGTMTWGKQNTLEEGVQQLDCAFDEYGLNFL 75
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Match: A0A7S1GPK5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GPK5_HEMAN) HSP 1 Score: 74.3 bits (181), Expect = 2.410e-14 Identity = 31/48 (64.58%), Postives = 43/48 (89.58%), Query Frame = 1
Query: 1 LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFV 144
+++ +LG SDLVVS+ CLGTMTWG+QN++EE EQL++AFDE+GVNF+
Sbjct: 60 MKFSKLGDSDLVVSRCCLGTMTWGQQNTEEEGVEQLNVAFDEYGVNFL 107 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101731.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101731.1.1 >prot_L-digitata_M_contig101731.1.1 ID=prot_L-digitata_M_contig101731.1.1|Name=mRNA_L-digitata_M_contig101731.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=48bp LRYRQLGKSDLVVSKVCLGTMTWGEQNSDEEAFEQLDMAFDEFGVNFVback to top mRNA from alignment at L-digitata_M_contig101731:208..351+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101731.1.1 ID=mRNA_L-digitata_M_contig101731.1.1|Name=mRNA_L-digitata_M_contig101731.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=144bp|location=Sequence derived from alignment at L-digitata_M_contig101731:208..351+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101731:208..351+ >mRNA_L-digitata_M_contig101731.1.1 ID=mRNA_L-digitata_M_contig101731.1.1|Name=mRNA_L-digitata_M_contig101731.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=144bp|location=Sequence derived from alignment at L-digitata_M_contig101731:208..351+ (Laminaria digitata LdigPH10_18mv male)back to top |