mRNA_L-digitata_M_contig101699.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A2D7FMI3_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FMI3_9PROT) HSP 1 Score: 132 bits (331), Expect = 1.280e-38 Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDGDAAAAPDKSLKSDSGDAVAEGVKKDEAAK 240
MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGL+E+K +GDAAA PDKSLKSDS DA + VKKDEAAK
Sbjct: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLREEKPEGDAAATPDKSLKSDSEDAAIDAVKKDEAAK 80
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A2D8PQF8_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PQF8_9PROT) HSP 1 Score: 127 bits (318), Expect = 1.230e-36 Identity = 65/81 (80.25%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDGDAAAAPDKSLKSDSGDAVAEGVKKDEAAKS 243
MG FSIWHW+IVLVVVLVLFGGGGKLSR+MGDAARGINAFKKGLKEDK+DGD APDK+L +D+GD +E KKDEAAKS
Sbjct: 1 MGAFSIWHWIIVLVVVLVLFGGGGKLSRLMGDAARGINAFKKGLKEDKSDGDPTTAPDKALNADTGDTASEAGKKDEAAKS 81
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A6N7FCQ3_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FCQ3_9PROT) HSP 1 Score: 101 bits (252), Expect = 1.350e-26 Identity = 54/80 (67.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDGDAAAAPDKSLKSDSGDAVAEGVKKDEAAK 240
MGTFSIWHW++VLVVVL+LFGGGGKLSR+MGD A+G+NAFKKGLK+ DG+ AA P + L SD A E KKDEA K
Sbjct: 1 MGTFSIWHWLVVLVVVLILFGGGGKLSRLMGDMAKGVNAFKKGLKD--KDGEDAADPQQKLDSDRAAATGEAPKKDEAVK 78
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A2E7QW55_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QW55_9PROT) HSP 1 Score: 92.4 bits (228), Expect = 6.280e-23 Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTD 150
MGTFSIWHWVIVLVVVLVLFGGGGKLSR+MGDAARGI AFK+GLK+D +D
Sbjct: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRLMGDAARGITAFKRGLKDDSSD 50
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A7Z9VH04_9PROT (Sec-independent protein translocase protein TatA n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7Z9VH04_9PROT) HSP 1 Score: 91.7 bits (226), Expect = 1.300e-22 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDGDAAAAPDKSLKSDSGDAVAEGVKKDEAAK 240
MGTFSIWHW+IVL VVLVLFGGGGK+SR+MGD +G+ +FKKG+KE++ +G K+LKS+ + V KKDEAAK
Sbjct: 1 MGTFSIWHWLIVLAVVLVLFGGGGKISRLMGDFGKGLKSFKKGMKEEEGEGAVTEDDVKTLKSEQTETVQPEEKKDEAAK 80
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A2E6GN04_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GN04_9PROT) HSP 1 Score: 91.3 bits (225), Expect = 1.750e-22 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDGDAAAAPDKSLKSDSGDAVAEGVKKDEAAK 240
MGTFSIWHW++VLVVVLVLFGGGGKL+R+MGDAARGINAFKKGLK+ T D A K++ ++ + A KDE AK
Sbjct: 1 MGTFSIWHWLVVLVVVLVLFGGGGKLTRLMGDAARGINAFKKGLKD--TGSDEKADEPKTIDVEAKEPSANTSSKDETAK 78
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: UPI00037514A0 (twin-arginine translocase TatA/TatE family subunit n=1 Tax=Kiloniella laminariae TaxID=454162 RepID=UPI00037514A0) HSP 1 Score: 89.7 bits (221), Expect = 5.580e-22 Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDGDA-AAAPDKSLKSDSGDAV 207
MGTFSIWHW+IVLVVVLVLFGGGGKLS++MGDA GI AFKKGLK++K+D A AAA +K S+ D V
Sbjct: 1 MGTFSIWHWLIVLVVVLVLFGGGGKLSKLMGDAGSGIKAFKKGLKDEKSDPSADAAAEEKKTISEEKDKV 70
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A545TQ26_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TQ26_9PROT) HSP 1 Score: 88.2 bits (217), Expect = 2.970e-21 Identity = 50/80 (62.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKED-KTDGDAAAAPDKSLKSDSGDAVAEGVKKDEAA 237
MG FSIWHW+IVLVVVLVLFGGGGKLS++MGDA GI AFKKGLKE+ K D D A +K+++ +S +A + +KD+AA
Sbjct: 1 MGAFSIWHWLIVLVVVLVLFGGGGKLSKLMGDAGSGIKAFKKGLKEEGKKDDDTTA--EKAIEGESTEAASTVAEKDKAA 78
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A2E5V2V6_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5V2V6_9PROT) HSP 1 Score: 85.5 bits (210), Expect = 3.280e-20 Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTD 150
MGTFSIWHW+IVLVVVLVLFGG GKLS +MGDAARGI AFKKGLK++ D
Sbjct: 1 MGTFSIWHWIIVLVVVLVLFGGRGKLSSLMGDAARGITAFKKGLKDEPAD 50
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Match: A0A1G3IC04_9PROT (Sec-independent protein translocase protein TatA n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 TaxID=1802022 RepID=A0A1G3IC04_9PROT) HSP 1 Score: 85.5 bits (210), Expect = 3.750e-20 Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDGDAAAAPDKSLKSDSGDA 204
MG+FSIWHWVIVLVVVLVLFGGGGK+SRIMGD +G+ +FKKG+KED+ D KSL+++S A
Sbjct: 1 MGSFSIWHWVIVLVVVLVLFGGGGKISRIMGDFGKGLKSFKKGMKEDEEDVTEPLRERKSLEAESSSA 68 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101699.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101699.1.1 >prot_L-digitata_M_contig101699.1.1 ID=prot_L-digitata_M_contig101699.1.1|Name=mRNA_L-digitata_M_contig101699.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=82bp MGTFSIWHWVIVLVVVLVLFGGGGKLSRIMGDAARGINAFKKGLKEDKTDback to top mRNA from alignment at L-digitata_M_contig101699:76..321+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101699.1.1 ID=mRNA_L-digitata_M_contig101699.1.1|Name=mRNA_L-digitata_M_contig101699.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=246bp|location=Sequence derived from alignment at L-digitata_M_contig101699:76..321+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101699:76..321+ >mRNA_L-digitata_M_contig101699.1.1 ID=mRNA_L-digitata_M_contig101699.1.1|Name=mRNA_L-digitata_M_contig101699.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=246bp|location=Sequence derived from alignment at L-digitata_M_contig101699:76..321+ (Laminaria digitata LdigPH10_18mv male)back to top |