mRNA_L-digitata_M_contig101698.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A059E8I4_9PROT (Sulfate permease n=8 Tax=root TaxID=1 RepID=A0A059E8I4_9PROT) HSP 1 Score: 327 bits (838), Expect = 9.130e-108 Identity = 173/183 (94.54%), Postives = 176/183 (96.17%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEFF KLEVLWAARGTVNWASVGIGA T+ LIVGLRRVAPKFPGLIVAVGLTSAVVY FHLPVDTIGSRFGALPSQLPMPKLP SLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGG+YRRNAEVMAQGAAN+GSALFGGLPATGAIARTATNVRAGGKTPVAGIVHA TILMAVLFAA
Sbjct: 153 AEFFGKLEVLWAARGTVNWASVGIGAATVALIVGLRRVAPKFPGLIVAVGLTSAVVYFFHLPVDTIGSRFGALPSQLPMPKLPGFSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGKYRRNAEVMAQGAANIGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHALTILMAVLFAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A059E7B9_9PROT (Sulfate permease n=4 Tax=Hyphomonas TaxID=85 RepID=A0A059E7B9_9PROT) HSP 1 Score: 297 bits (760), Expect = 5.600e-96 Identity = 154/183 (84.15%), Postives = 169/183 (92.35%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEF K++ LWAAR TV+W S+GIGAVTMVLIV LRR+APKFPGLIVAVG TSA V+LF LPVDTIGSRFG +PSQLP P+LP+L+L+RV ELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAAN+GSA+FGGLPATGAIARTATNVRAGGKTPVAG+VHA IL+AVLFAA
Sbjct: 153 AEFIGKVDALWAARATVDWTSLGIGAVTMVLIVLLRRIAPKFPGLIVAVGFTSAAVFLFDLPVDTIGSRFGTMPSQLPQPRLPDLTLNRVIELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANIGSAIFGGLPATGAIARTATNVRAGGKTPVAGLVHALAILLAVLFAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A062TZG2_9PROT (Sulfate permease n=2 Tax=Hyphomonas TaxID=85 RepID=A0A062TZG2_9PROT) HSP 1 Score: 266 bits (679), Expect = 9.060e-84 Identity = 141/183 (77.05%), Postives = 156/183 (85.25%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEFF+KL LW R T + IG TMVLIV LRR+APKFPGLIVAVG+TSA L +LPVDTIGSRFGALPSQLPMP +P S+DRV ELLPSAFVIAFLAGVESLLSAMVADRMTGG YRRNAEV+AQG AN+GS+LFGG+PATGAIARTATNV AGGKTPVAG+VHA TIL+A++ AA
Sbjct: 153 AEFFAKLSALWGGRETFTPHAFAIGLATMVLIVVLRRIAPKFPGLIVAVGVTSAAAALLNLPVDTIGSRFGALPSQLPMPHVPNFSVDRVVELLPSAFVIAFLAGVESLLSAMVADRMTGGSYRRNAEVLAQGFANIGSSLFGGMPATGAIARTATNVNAGGKTPVAGMVHAVTILLAMMLAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: UPI00174D2A92 (SulP family inorganic anion transporter n=2 Tax=Aliiroseovarius TaxID=1658781 RepID=UPI00174D2A92) HSP 1 Score: 261 bits (667), Expect = 5.960e-82 Identity = 140/183 (76.50%), Postives = 158/183 (86.34%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEF +K+ LWAAR TV+ A++ IG TM+LI GLRR+APKFPGLIVAVGLTSA+V L LPVDTI SRFGALPS LP P LPE+S+ R+TELLPSAFVIAFLA +ESLLSAMVADRM GG++R NAEV+AQG AN+GSALF GLPATGAIARTATNVRAGGKTPVAGIVHA TIL+ +L AA
Sbjct: 153 AEFIAKMGALWAARDTVSGAALAIGLATMILIAGLRRLAPKFPGLIVAVGLTSALVALAALPVDTIFSRFGALPSTLPAPALPEISIARITELLPSAFVIAFLASIESLLSAMVADRMIGGKHRPNAEVLAQGFANIGSALFAGLPATGAIARTATNVRAGGKTPVAGIVHALTILLVMLLAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A239I7N4_9RHOB (Sulfate permease, SulP family n=1 Tax=Tropicimonas sediminicola TaxID=1031541 RepID=A0A239I7N4_9RHOB) HSP 1 Score: 260 bits (665), Expect = 1.160e-81 Identity = 140/183 (76.50%), Postives = 156/183 (85.25%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
A+F K+ LWAAR T+ AS+GIG TMVLI+ LRR+ P+FPGLIVAV LTS L LPVDTIG RFGALP+ LPMPKLP+LSL RVTELLPSAFVIAFLAGVESLLSAMVADRM GG++R NAEV+AQGAAN+GSALFGGLPATGAIARTATNVRAGGKTPVAG+VHA TIL ++ AA
Sbjct: 153 ADFLEKVPALWAARDTLAPASLGIGLATMVLIMLLRRLFPRFPGLIVAVSLTSVAAALLALPVDTIGGRFGALPNHLPMPKLPDLSLQRVTELLPSAFVIAFLAGVESLLSAMVADRMIGGRHRPNAEVLAQGAANIGSALFGGLPATGAIARTATNVRAGGKTPVAGLVHALTILAVMMLAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A4R3JPZ6_9RHOB (SulP family sulfate permease n=1 Tax=Primorskyibacter sedentarius TaxID=745311 RepID=A0A4R3JPZ6_9RHOB) HSP 1 Score: 259 bits (662), Expect = 3.370e-81 Identity = 138/183 (75.41%), Postives = 158/183 (86.34%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEF K+E LW+AR T++ ++ IG TMVLIV LRRVAPKFPGLI+AVG+TSA V L+ LPVDTI SRFGALPS LP+P LPE+SL R+TELLPSA VIAFLA +ESLLSAMVADRM+GG +R NAEV+AQG AN+GS+LFGGLPATGAIARTATNVRAGGKTPVAGIVHA TIL+ +L AA
Sbjct: 153 AEFIGKMEALWSARDTLSGLALAIGLATMVLIVALRRVAPKFPGLIIAVGVTSAAVALWMLPVDTIFSRFGALPSTLPIPALPEISLARITELLPSAIVIAFLASIESLLSAMVADRMSGGHHRPNAEVLAQGWANIGSSLFGGLPATGAIARTATNVRAGGKTPVAGIVHALTILLVMLVAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A221JZQ4_9RHOB (C4-dicarboxylic acid transporter DauA n=2 Tax=Pseudosulfitobacter TaxID=2854186 RepID=A0A221JZQ4_9RHOB) HSP 1 Score: 259 bits (661), Expect = 4.490e-81 Identity = 137/183 (74.86%), Postives = 158/183 (86.34%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEF +K+E LWAAR + + ++ +G VTM+LIVGLRR+APKFPGLIVAVG+TSAVV L LPVDTI SRFGALP+ LPMP LPE+S+ R+ ELLPSAFVIAFLAG+ESLLSAMVADRM G +R NAE++AQG AN+GSALFGGLPATGAIARTATNVRAGGKTPVAGIVHA TIL+ +L A
Sbjct: 153 AEFVAKIETLWAARDSTSVGALAVGGVTMILIVGLRRLAPKFPGLIVAVGVTSAVVALTALPVDTIFSRFGALPNTLPMPALPEISVARMIELLPSAFVIAFLAGIESLLSAMVADRMIDGHHRPNAEILAQGFANIGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHALTILLVMLLVA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A1I0WBL9_9RHOB (Sulfate permease, SulP family n=1 Tax=Poseidonocella pacifica TaxID=871651 RepID=A0A1I0WBL9_9RHOB) HSP 1 Score: 259 bits (661), Expect = 4.620e-81 Identity = 136/183 (74.32%), Postives = 158/183 (86.34%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEF +K+EVLWA R + A++ I TMVLI+ LRR APK+PGLIVAVGLTSA V L HLPV+TI SRFGALPS LPMP LPE+S++R+ ELLPSAFVIAFLAGVESLLSAMVADRM G++R NAE++AQGAAN+GSALFGGLPATGAIARTATNVRAGG+TPVAG+VHA TIL+ ++ AA
Sbjct: 153 AEFLAKVEVLWAGRAGTSGAALAIALATMVLILALRRAAPKYPGLIVAVGLTSAAVTLAHLPVETIQSRFGALPSSLPMPSLPEISVERLRELLPSAFVIAFLAGVESLLSAMVADRMIAGRHRPNAELLAQGAANLGSALFGGLPATGAIARTATNVRAGGRTPVAGLVHALTILIVMMLAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A238LGN6_9RHOB (C4-dicarboxylic acid transporter DauA n=1 Tax=Flavimaricola marinus TaxID=1819565 RepID=A0A238LGN6_9RHOB) HSP 1 Score: 258 bits (659), Expect = 8.980e-81 Identity = 139/183 (75.96%), Postives = 156/183 (85.25%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEF +K E LWAAR +++ +VGIG TMVLI LRR+APKFPGLIVAVG+TSA+V LPVDTI SRFGALPS LP P LPE+SLDR+ ELLPSA VIAFLAG+ESLLSAMVAD+M GG +R NAEV+AQG AN+GSALFGGLPATGAIARTATNVRAGGKTPVAGIVHA TIL+ +L AA
Sbjct: 153 AEFIAKTEALWAARHSLSGTAVGIGLATMVLITLLRRIAPKFPGLIVAVGVTSALVAFAALPVDTIFSRFGALPSALPWPALPEISLDRMVELLPSAIVIAFLAGIESLLSAMVADKMIGGHHRPNAEVLAQGFANIGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHALTILLVMLLAA 335
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Match: A0A073J7H0_9RHOB (Sulfate permease n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A073J7H0_9RHOB) HSP 1 Score: 257 bits (656), Expect = 2.540e-80 Identity = 137/183 (74.86%), Postives = 156/183 (85.25%), Query Frame = 1
Query: 1 AEFFSKLEVLWAARGTVNWASVGIGAVTMVLIVGLRRVAPKFPGLIVAVGLTSAVVYLFHLPVDTIGSRFGALPSQLPMPKLPELSLDRVTELLPSAFVIAFLAGVESLLSAMVADRMTGGQYRRNAEVMAQGAANMGSALFGGLPATGAIARTATNVRAGGKTPVAGIVHAFTILMAVLFAA 549
AEF +K+E LWAARGT + ++GIG TMVLIV LRR+AP+FPGLIVAVG+TSA+V L LPVDTI SRFG LPS LPMP LP+ S+ RV ELLPSAFVIAFLAG+ESLLSAMVADRM G +R NAE++AQG AN+GSALF GLPATGAIARTATNVRAGGKTPVAG+VHA TIL+ +L AA
Sbjct: 153 AEFIAKVETLWAARGTTSGVALGIGVATMVLIVVLRRLAPRFPGLIVAVGVTSALVALSALPVDTIFSRFGTLPSSLPMPALPDFSMTRVVELLPSAFVIAFLAGIESLLSAMVADRMIDGHHRPNAEILAQGFANIGSALFTGLPATGAIARTATNVRAGGKTPVAGMVHALTILLVMLLAA 335 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101698.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101698.1.1 >prot_L-digitata_M_contig101698.1.1 ID=prot_L-digitata_M_contig101698.1.1|Name=mRNA_L-digitata_M_contig101698.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=79bp MPALAGLLMLTAWNMSEPHKWRAYMSDEKANVALLLITLVLTVVADLTIAback to top mRNA from alignment at L-digitata_M_contig101698:1..808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101698.1.1 ID=mRNA_L-digitata_M_contig101698.1.1|Name=mRNA_L-digitata_M_contig101698.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=808bp|location=Sequence derived from alignment at L-digitata_M_contig101698:1..808+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101698:1..808+ >mRNA_L-digitata_M_contig101698.1.1 ID=mRNA_L-digitata_M_contig101698.1.1|Name=mRNA_L-digitata_M_contig101698.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=237bp|location=Sequence derived from alignment at L-digitata_M_contig101698:1..808+ (Laminaria digitata LdigPH10_18mv male)back to top |