mRNA_L-digitata_M_contig101679.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: A0A6H5JLY0_9PHAE (Aminotran_5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY0_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 3.630e-22 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDD 168
IG+FSAASNVTG LEDVDKVTATLHRAGALALWDYATAAPYV +DMNP ASG +D
Sbjct: 275 IGAFSAASNVTGLLEDVDKVTATLHRAGALALWDYATAAPYVHVDMNPSASGLED 329
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: D7FR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR81_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 3.640e-22 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDD 168
IG+FSAASNVTG LEDVDKVTATLHRAGALALWDYATAAPYV +DMNP ASG +D
Sbjct: 264 IGAFSAASNVTGLLEDVDKVTATLHRAGALALWDYATAAPYVHVDMNPSASGLED 318
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: UPI001B887636 (uncharacterized protein LOC121375484 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887636) HSP 1 Score: 84.3 bits (207), Expect = 1.450e-17 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDDQ 171
IGSFSAASN+TG L DVD +TA LHR GALA WDYATAAPYV++DMNPV G +++
Sbjct: 201 IGSFSAASNITGILVDVDAITACLHRYGALAFWDYATAAPYVKIDMNPVVLGENEK 256
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: A0A7S0WKI6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WKI6_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 2.710e-17 Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTD 165
IGSFSAASNVTG DVD +T TLHR GALA WDYA AAPYV +DMNPV D
Sbjct: 12 IGSFSAASNVTGVRADVDLITETLHRGGALAFWDYAAAAPYVGIDMNPVVFDAD 65
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: UPI001B889F72 (uncharacterized protein LOC121374723 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889F72) HSP 1 Score: 83.2 bits (204), Expect = 3.690e-17 Identity = 41/61 (67.21%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDDQVRPYK 186
IGSFSAASN+TG L DVD +TA LHR GALA WDYATAAPYV++DMNP G + YK
Sbjct: 204 IGSFSAASNITGILVDVDAITACLHRYGALAFWDYATAAPYVKIDMNPFVPGLVEMKLAYK 264
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: UPI00201F23BA (uncharacterized protein LOC124147566 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F23BA) HSP 1 Score: 81.6 bits (200), Expect = 1.280e-16 Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTD 165
IG FSAASN+TG L DV+++T LH+ GALA WDYATAAPYVR+DMNP+ G+D
Sbjct: 200 IGCFSAASNITGILTDVNRITICLHKHGALAFWDYATAAPYVRIDMNPIVPGSD 253
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: C1MK02_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MK02_MICPC) HSP 1 Score: 81.3 bits (199), Expect = 1.700e-16 Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDDQVRPY 183
IGSFSAASNVTG + DVD +T LHRAGALA WDYATAA Y+++DMNPV D + PY
Sbjct: 188 IGSFSAASNVTGVVADVDGITEDLHRAGALAFWDYATAASYLQVDMNPVRFFPDGTLNPY 247
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: A0A225V7N4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V7N4_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.750e-16 Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDDQVRPY 183
IG+FSAASN+TG L DVD V+A LH+ GALA WDYAT APYV +DMNPV TD+Q RP+
Sbjct: 212 IGAFSAASNLTGVLTDVDAVSALLHQHGALACWDYATCAPYVNIDMNPVV--TDEQRRPF 269
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: A0A8B8D6V6_CRAVI (LOW QUALITY PROTEIN: uncharacterized protein LOC111124021 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D6V6_CRAVI) HSP 1 Score: 80.9 bits (198), Expect = 2.400e-16 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDDQVRPYK 186
IG F AASN+TG L DV+ +T LH+ GALA WDYATAAPYV++DMNPV + +++Q YK
Sbjct: 206 IGCFCAASNITGNLVDVNSITICLHKHGALAFWDYATAAPYVKIDMNPVVTSSEEQPYVYK 266
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Match: K1QLC0_CRAGI (tRNA 2-thiocytidine biosynthesis protein ttcA n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1QLC0_CRAGI) HSP 1 Score: 80.9 bits (198), Expect = 2.400e-16 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 4 IGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVASGTDDQVRPYK 186
IG F AASNVTG + DV+ +T LH+ GAL+ WDYATAAPYV++DMNPV + ++DQ YK
Sbjct: 206 IGCFCAASNVTGSIVDVNSITVCLHKHGALSFWDYATAAPYVKIDMNPVLTSSEDQPYVYK 266 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101679.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101679.1.1 >prot_L-digitata_M_contig101679.1.1 ID=prot_L-digitata_M_contig101679.1.1|Name=mRNA_L-digitata_M_contig101679.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=62bp CIGSFSAASNVTGGLEDVDKVTATLHRAGALALWDYATAAPYVRMDMNPVback to top mRNA from alignment at L-digitata_M_contig101679:258..443- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101679.1.1 ID=mRNA_L-digitata_M_contig101679.1.1|Name=mRNA_L-digitata_M_contig101679.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=186bp|location=Sequence derived from alignment at L-digitata_M_contig101679:258..443- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101679:258..443- >mRNA_L-digitata_M_contig101679.1.1 ID=mRNA_L-digitata_M_contig101679.1.1|Name=mRNA_L-digitata_M_contig101679.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=186bp|location=Sequence derived from alignment at L-digitata_M_contig101679:258..443- (Laminaria digitata LdigPH10_18mv male)back to top |